RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 GOLM1Q8NBJ4 401 aa7.4□□□□□ -1.22
SDCBP-210ENST00000522843 FAM13CQ8NE31 585 aa7.4□□□□□ -1.22
SDCBP-210ENST00000522843 FBXO27Q8NI29 283 aa7.4□□□□□ -1.22
SDCBP-210ENST00000522843 URGCPQ8TCY9 931 aa7.4□□□□□ -1.22
SDCBP-210ENST00000522843 ZCCHC14Q8WYQ9 949 aaKnown RBP7.4□□□□□ -1.22
SDCBP-210ENST00000522843 RABGGTAQ92696 567 aa7.4□□□□□ -1.22
SDCBP-210ENST00000522843 DNASE1L2Q92874 299 aa7.4□□□□□ -1.22
SDCBP-210ENST00000522843 MCRS1Q96EZ8 462 aa7.4□□□□□ -1.22
SDCBP-210ENST00000522843 SCLT1Q96NL6 688 aa7.4□□□□□ -1.22
SDCBP-210ENST00000522843 MAP3K14Q99558 947 aa7.4□□□□□ -1.22
SDCBP-210ENST00000522843 CLSTN3Q9BQT9 956 aa7.4□□□□□ -1.22
SDCBP-210ENST00000522843 SH2D3AQ9BRG2 576 aa7.4□□□□□ -1.22
SDCBP-210ENST00000522843 IER2Q9BTL4 223 aa7.4□□□□□ -1.22
SDCBP-210ENST00000522843 SCNM1Q9BWG6 230 aa7.4□□□□□ -1.22
SDCBP-210ENST00000522843 RBM12Q9NTZ6 932 aaKnown RBP7.4□□□□□ -1.22
SDCBP-210ENST00000522843 AGPAT5Q9NUQ2 364 aa7.4□□□□□ -1.22
SDCBP-210ENST00000522843 KBTBD4Q9NVX7 518 aa7.4□□□□□ -1.22
SDCBP-210ENST00000522843 CACNG4Q9UBN1 327 aa7.4□□□□□ -1.22
SDCBP-210ENST00000522843 SEC63Q9UGP8 760 aaKnown RBP7.4□□□□□ -1.22
SDCBP-210ENST00000522843 MRPS17Q9Y2R5 130 aaKnown RBP7.4□□□□□ -1.22
SDCBP-210ENST00000522843 POLR3KQ9Y2Y1 108 aaPredicted RBP7.4□□□□□ -1.22
SDCBP-210ENST00000522843 TICRRQ7Z2Z1 1910 aa7.4□□□□□ -1.23
SDCBP-210ENST00000522843 CACNA1EQ15878 2313 aa7.39□□□□□ -1.23
SDCBP-210ENST00000522843 OTOL1A6NHN0 477 aaPredicted RBP7.39□□□□□ -1.23
SDCBP-210ENST00000522843 IPO5O00410 1097 aaKnown RBP7.39□□□□□ -1.23
SDCBP-210ENST00000522843 EDIL3O43854 480 aa7.39□□□□□ -1.23
SDCBP-210ENST00000522843 HNRNPA1P09651 372 aaKnown RBP eCLIP7.39□□□□□ -1.23
SDCBP-210ENST00000522843 PI3P19957 117 aa7.39□□□□□ -1.23
SDCBP-210ENST00000522843 SFPQP23246 707 aaKnown RBP eCLIP7.39□□□□□ -1.23
SDCBP-210ENST00000522843 CNR2P34972 360 aa7.39□□□□□ -1.23
SDCBP-210ENST00000522843 NOVA1P51513 510 aaKnown RBP7.39□□□□□ -1.23
SDCBP-210ENST00000522843 GALK1P51570 392 aa7.39□□□□□ -1.23
SDCBP-210ENST00000522843 SRSF3P84103 164 aaKnown RBP7.39□□□□□ -1.23
SDCBP-210ENST00000522843 PRKCEQ02156 737 aa7.39□□□□□ -1.23
SDCBP-210ENST00000522843 TEKQ02763 1124 aa7.39□□□□□ -1.23
SDCBP-210ENST00000522843 TMEM201Q5SNT2 666 aa7.39□□□□□ -1.23
SDCBP-210ENST00000522843 FUT10Q6P4F1 479 aa7.39□□□□□ -1.23
SDCBP-210ENST00000522843 RAB11FIP4Q86YS3 637 aa7.39□□□□□ -1.23
SDCBP-210ENST00000522843 MB21D2Q8IYB1 491 aaPredicted RBP7.39□□□□□ -1.23
SDCBP-210ENST00000522843 GPR65Q8IYL9 337 aa7.39□□□□□ -1.23
SDCBP-210ENST00000522843 SPEM1Q8N4L4 309 aa7.39□□□□□ -1.23
SDCBP-210ENST00000522843 GSTCDQ8NEC7 633 aa7.39□□□□□ -1.23
SDCBP-210ENST00000522843 CYB5D2Q8WUJ1 264 aa7.39□□□□□ -1.23
SDCBP-210ENST00000522843 FAM3CQ92520 227 aa7.39□□□□□ -1.23
SDCBP-210ENST00000522843 DACT3Q96B18 629 aaPredicted RBP7.39□□□□□ -1.23
SDCBP-210ENST00000522843 PGBD4Q96DM1 585 aa7.39□□□□□ -1.23
SDCBP-210ENST00000522843 FAM193BQ96PV7 902 aaPredicted RBP7.39□□□□□ -1.23
SDCBP-210ENST00000522843 GAD1Q99259 594 aa7.39□□□□□ -1.23
SDCBP-210ENST00000522843 MINDY3Q9H8M7 445 aa7.39□□□□□ -1.23
SDCBP-210ENST00000522843 IFT122Q9HBG6 1241 aa7.39□□□□□ -1.23
SDCBP-210ENST00000522843 RIC8AQ9NPQ8 531 aa7.39□□□□□ -1.23
SDCBP-210ENST00000522843 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.39□□□□□ -1.23
SDCBP-210ENST00000522843 REV1Q9UBZ9 1251 aa7.39□□□□□ -1.23
SDCBP-210ENST00000522843 MBD1Q9UIS9 605 aaPredicted RBP7.39□□□□□ -1.23
SDCBP-210ENST00000522843 PCDHA10Q9Y5I2 948 aa7.39□□□□□ -1.23
SDCBP-210ENST00000522843 EML5Q05BV3 1969 aa7.39□□□□□ -1.23
SDCBP-210ENST00000522843 VWA8A3KMH1 1905 aa7.39□□□□□ -1.23
SDCBP-210ENST00000522843 CNTNAP2Q9UHC6 1331 aa7.38□□□□□ -1.23
SDCBP-210ENST00000522843 ARL5CA6NH57 179 aa7.38□□□□□ -1.23
SDCBP-210ENST00000522843 E7EWF7 191 aa7.38□□□□□ -1.23
SDCBP-210ENST00000522843 ARNTLO00327 626 aa7.38□□□□□ -1.23
SDCBP-210ENST00000522843 MAN2B1O00754 1011 aa7.38□□□□□ -1.23
SDCBP-210ENST00000522843 DDAH1O94760 285 aa7.38□□□□□ -1.23
SDCBP-210ENST00000522843 CELA3BP08861 270 aa7.38□□□□□ -1.23
SDCBP-210ENST00000522843 POU2F2P09086 479 aa7.38□□□□□ -1.23
SDCBP-210ENST00000522843 CEBPBP17676 345 aa7.38□□□□□ -1.23
SDCBP-210ENST00000522843 HOXA9P31269 272 aa7.38□□□□□ -1.23
SDCBP-210ENST00000522843 MLH1P40692 756 aa7.38□□□□□ -1.23
SDCBP-210ENST00000522843 SCNN1GP51170 649 aa7.38□□□□□ -1.23
SDCBP-210ENST00000522843 KRTAP10-2P60368 255 aa7.38□□□□□ -1.23
SDCBP-210ENST00000522843 PWP1Q13610 501 aa7.38□□□□□ -1.23
SDCBP-210ENST00000522843 USP41Q3LFD5 358 aa7.38□□□□□ -1.23
SDCBP-210ENST00000522843 PABPC1LQ4VXU2 614 aaKnown RBP7.38□□□□□ -1.23
SDCBP-210ENST00000522843 PPM1LQ5SGD2 360 aa7.38□□□□□ -1.23
SDCBP-210ENST00000522843 SNAP47Q5SQN1 464 aa7.38□□□□□ -1.23
SDCBP-210ENST00000522843 CEP68Q76N32 757 aa7.38□□□□□ -1.23
SDCBP-210ENST00000522843 CATSPER4Q7RTX7 472 aa7.38□□□□□ -1.23
SDCBP-210ENST00000522843 HEATR3Q7Z4Q2 680 aa7.38□□□□□ -1.23
SDCBP-210ENST00000522843 GGNQ86UU5 652 aa7.38□□□□□ -1.23
SDCBP-210ENST00000522843 KBTBD6Q86V97 674 aa7.38□□□□□ -1.23
SDCBP-210ENST00000522843 WDR5BQ86VZ2 330 aa7.38□□□□□ -1.23
SDCBP-210ENST00000522843 SMAP1Q8IYB5 467 aaPredicted RBP7.38□□□□□ -1.23
SDCBP-210ENST00000522843 CTCFLQ8NI51 663 aaPredicted RBP7.38□□□□□ -1.23
SDCBP-210ENST00000522843 LNX1Q8TBB1 728 aaPredicted RBP7.38□□□□□ -1.23
SDCBP-210ENST00000522843 SLC7A14Q8TBB6 771 aa7.38□□□□□ -1.23
SDCBP-210ENST00000522843 GIPC2Q8TF65 315 aa7.38□□□□□ -1.23
SDCBP-210ENST00000522843 RNF141Q8WVD5 230 aa7.38□□□□□ -1.23
SDCBP-210ENST00000522843 LENG9Q96B70 501 aa7.38□□□□□ -1.23
SDCBP-210ENST00000522843 ELSPBP1Q96BH3 223 aa7.38□□□□□ -1.23
SDCBP-210ENST00000522843 FAM167AQ96KS9 214 aa7.38□□□□□ -1.23
SDCBP-210ENST00000522843 LZTS2Q9BRK4 669 aa7.38□□□□□ -1.23
SDCBP-210ENST00000522843 PAAF1Q9BRP4 392 aa7.38□□□□□ -1.23
SDCBP-210ENST00000522843 ZNF577Q9BSK1 485 aa7.38□□□□□ -1.23
SDCBP-210ENST00000522843 EIF2AQ9BY44 585 aaKnown RBP7.38□□□□□ -1.23
SDCBP-210ENST00000522843 ZNF334Q9HCZ1 680 aaPredicted RBP7.38□□□□□ -1.23
SDCBP-210ENST00000522843 SIRT5Q9NXA8 310 aa7.38□□□□□ -1.23
SDCBP-210ENST00000522843 HES2Q9Y543 173 aa7.38□□□□□ -1.23
SDCBP-210ENST00000522843 PIAS3Q9Y6X2 628 aa7.38□□□□□ -1.23
SDCBP-210ENST00000522843 TDRD15B5MCY1 1934 aaKnown RBP7.38□□□□□ -1.23
SDCBP-210ENST00000522843 ASCC3Q8N3C0 2202 aaKnown RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms