RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 FUBP1Q96AE4 644 aaKnown RBP5.55□□□□□ -1.52
HMGB1P1-201ENST00000522557 PNKPQ96T60 521 aa5.55□□□□□ -1.52
HMGB1P1-201ENST00000522557 KATNAL1Q9BW62 490 aa5.55□□□□□ -1.52
HMGB1P1-201ENST00000522557 STK31Q9BXU1 1019 aa5.55□□□□□ -1.52
HMGB1P1-201ENST00000522557 MAGEB5Q9BZ81 275 aa5.55□□□□□ -1.52
HMGB1P1-201ENST00000522557 IMPG2Q9BZV3 1241 aa5.55□□□□□ -1.52
HMGB1P1-201ENST00000522557 GALNT9Q9HCQ5 603 aa5.55□□□□□ -1.52
HMGB1P1-201ENST00000522557 DACT1Q9NYF0 836 aa5.55□□□□□ -1.52
HMGB1P1-201ENST00000522557 VPS51Q9UID3 782 aa5.55□□□□□ -1.52
HMGB1P1-201ENST00000522557 KCNE5Q9UJ90 142 aa5.55□□□□□ -1.52
HMGB1P1-201ENST00000522557 LZTS1Q9Y250 596 aa5.55□□□□□ -1.52
HMGB1P1-201ENST00000522557 TBC1D30Q9Y2I9 924 aa5.55□□□□□ -1.52
HMGB1P1-201ENST00000522557 DTNAQ9Y4J8 743 aa5.55□□□□□ -1.52
HMGB1P1-201ENST00000522557 A0A1B0GVC2 190 aa5.54□□□□□ -1.52
HMGB1P1-201ENST00000522557 PCDH17O14917 1159 aa5.54□□□□□ -1.52
HMGB1P1-201ENST00000522557 FAM155BO75949 473 aa5.54□□□□□ -1.52
HMGB1P1-201ENST00000522557 NUDT3O95989 172 aa5.54□□□□□ -1.52
HMGB1P1-201ENST00000522557 DHRS4L1P0CG22 281 aa5.54□□□□□ -1.52
HMGB1P1-201ENST00000522557 XRCC6P12956 609 aaKnown RBP eCLIP5.54□□□□□ -1.52
HMGB1P1-201ENST00000522557 AVPR1BP47901 424 aa5.54□□□□□ -1.52
HMGB1P1-201ENST00000522557 CPT1AP50416 773 aa5.54□□□□□ -1.52
HMGB1P1-201ENST00000522557 LOXL3P58215 753 aa5.54□□□□□ -1.52
HMGB1P1-201ENST00000522557 ARHGEF7Q14155 803 aa5.54□□□□□ -1.52
HMGB1P1-201ENST00000522557 MAPKAPK3Q16644 382 aa5.54□□□□□ -1.52
HMGB1P1-201ENST00000522557 ZNF750Q32MQ0 723 aa5.54□□□□□ -1.52
HMGB1P1-201ENST00000522557 ALFQ53S48 1182 aa5.54□□□□□ -1.52
HMGB1P1-201ENST00000522557 TMTC4Q5T4D3 741 aa5.54□□□□□ -1.52
HMGB1P1-201ENST00000522557 RRAGBQ5VZM2 374 aa5.54□□□□□ -1.52
HMGB1P1-201ENST00000522557 TAPT1Q6NXT6 567 aa5.54□□□□□ -1.52
HMGB1P1-201ENST00000522557 TAF2Q6P1X5 1199 aa5.54□□□□□ -1.52
HMGB1P1-201ENST00000522557 ZNF280BQ86YH2 543 aa5.54□□□□□ -1.52
HMGB1P1-201ENST00000522557 PSD4Q8NDX1 1056 aa5.54□□□□□ -1.52
HMGB1P1-201ENST00000522557 OR1N1Q8NGS0 311 aa5.54□□□□□ -1.52
HMGB1P1-201ENST00000522557 IPCEF1Q8WWN9 437 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P1-201ENST00000522557 CCT6BQ92526 530 aa5.54□□□□□ -1.52
HMGB1P1-201ENST00000522557 SNX27Q96L92 541 aa5.54□□□□□ -1.52
HMGB1P1-201ENST00000522557 SCLT1Q96NL6 688 aa5.54□□□□□ -1.52
HMGB1P1-201ENST00000522557 SLC46A1Q96NT5 459 aa5.54□□□□□ -1.52
HMGB1P1-201ENST00000522557 FAM83DQ9H4H8 585 aa5.54□□□□□ -1.52
HMGB1P1-201ENST00000522557 UNKLQ9H9P5 680 aaKnown RBP5.54□□□□□ -1.52
HMGB1P1-201ENST00000522557 PRDM16Q9HAZ2 1276 aa5.54□□□□□ -1.52
HMGB1P1-201ENST00000522557 HEYLQ9NQ87 328 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P1-201ENST00000522557 PDP2Q9P2J9 529 aa5.54□□□□□ -1.52
HMGB1P1-201ENST00000522557 ZNHIT2Q9UHR6 403 aa5.54□□□□□ -1.52
HMGB1P1-201ENST00000522557 MAGED2Q9UNF1 606 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P1-201ENST00000522557 SCAF8Q9UPN6 1271 aaKnown RBP5.54□□□□□ -1.52
HMGB1P1-201ENST00000522557 CDY1Q9Y6F8 540 aa5.54□□□□□ -1.52
HMGB1P1-201ENST00000522557 TRIM38O00635 465 aa5.53□□□□□ -1.52
HMGB1P1-201ENST00000522557 KIAA0355O15063 1070 aa5.53□□□□□ -1.52
HMGB1P1-201ENST00000522557 NCAM2O15394 837 aa5.53□□□□□ -1.52
HMGB1P1-201ENST00000522557 INMTO95050 263 aa5.53□□□□□ -1.52
HMGB1P1-201ENST00000522557 ESRRBO95718 433 aa5.53□□□□□ -1.52
HMGB1P1-201ENST00000522557 ATXN1LP0C7T5 689 aaKnown RBP5.53□□□□□ -1.52
HMGB1P1-201ENST00000522557 ARP10275 920 aa5.53□□□□□ -1.52
HMGB1P1-201ENST00000522557 ITGA8P53708 1063 aa5.53□□□□□ -1.52
HMGB1P1-201ENST00000522557 ARL4CP56559 192 aa5.53□□□□□ -1.52
HMGB1P1-201ENST00000522557 PIGFQ07326 219 aa5.53□□□□□ -1.52
HMGB1P1-201ENST00000522557 FHL3Q13643 280 aa5.53□□□□□ -1.52
HMGB1P1-201ENST00000522557 EFR3AQ14156 821 aa5.53□□□□□ -1.52
HMGB1P1-201ENST00000522557 SLC29A2Q14542 456 aa5.53□□□□□ -1.52
HMGB1P1-201ENST00000522557 RALBP1Q15311 655 aa5.53□□□□□ -1.52
HMGB1P1-201ENST00000522557 GEN1Q17RS7 908 aa5.53□□□□□ -1.52
HMGB1P1-201ENST00000522557 TRIM71Q2Q1W2 868 aaKnown RBP5.53□□□□□ -1.52
HMGB1P1-201ENST00000522557 PLA1AQ53H76 456 aa5.53□□□□□ -1.52
HMGB1P1-201ENST00000522557 RAP1GAP2Q684P5 730 aa5.53□□□□□ -1.52
HMGB1P1-201ENST00000522557 CRTC1Q6UUV9 634 aa5.53□□□□□ -1.52
HMGB1P1-201ENST00000522557 RFX8Q6ZV50 586 aa5.53□□□□□ -1.52
HMGB1P1-201ENST00000522557 USP49Q70CQ1 688 aa5.53□□□□□ -1.52
HMGB1P1-201ENST00000522557 CCDC28AQ8IWP9 274 aa5.53□□□□□ -1.52
HMGB1P1-201ENST00000522557 ATG16L2Q8NAA4 619 aa5.53□□□□□ -1.52
HMGB1P1-201ENST00000522557 MUL1Q969V5 352 aa5.53□□□□□ -1.52
HMGB1P1-201ENST00000522557 LRRC46Q96FV0 321 aa5.53□□□□□ -1.52
HMGB1P1-201ENST00000522557 FAM227BQ96M60 508 aa5.53□□□□□ -1.52
HMGB1P1-201ENST00000522557 PPP1R9BQ96SB3 815 aa5.53□□□□□ -1.52
HMGB1P1-201ENST00000522557 DDX23Q9BUQ8 820 aaKnown RBP5.53□□□□□ -1.52
HMGB1P1-201ENST00000522557 C9orf78Q9NZ63 289 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P1-201ENST00000522557 ITGB1BP2Q9UKP3 347 aa5.53□□□□□ -1.52
HMGB1P1-201ENST00000522557 CA14Q9ULX7 337 aa5.53□□□□□ -1.52
HMGB1P1-201ENST00000522557 LRRFIP2Q9Y608 721 aaKnown RBP5.53□□□□□ -1.52
HMGB1P1-201ENST00000522557 MAST3O60307 1309 aa5.52□□□□□ -1.53
HMGB1P1-201ENST00000522557 SPATA31A3Q5VYP0 1347 aa5.52□□□□□ -1.53
HMGB1P1-201ENST00000522557 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.52□□□□□ -1.53
HMGB1P1-201ENST00000522557 A0A1W2PS29 197 aa5.52□□□□□ -1.53
HMGB1P1-201ENST00000522557 H7C4K7 107 aa5.52□□□□□ -1.53
HMGB1P1-201ENST00000522557 POLRMTO00411 1230 aaKnown RBP5.52□□□□□ -1.53
HMGB1P1-201ENST00000522557 TNFRSF6BO95407 300 aa5.52□□□□□ -1.53
HMGB1P1-201ENST00000522557 GLP2RO95838 553 aa5.52□□□□□ -1.53
HMGB1P1-201ENST00000522557 CSF1RP07333 972 aa5.52□□□□□ -1.53
HMGB1P1-201ENST00000522557 KCNA2P16389 499 aa5.52□□□□□ -1.53
HMGB1P1-201ENST00000522557 NPPBP16860 134 aa5.52□□□□□ -1.53
HMGB1P1-201ENST00000522557 KCNA3P22001 575 aa5.52□□□□□ -1.53
HMGB1P1-201ENST00000522557 CLK3P49761 638 aaKnown RBP5.52□□□□□ -1.53
HMGB1P1-201ENST00000522557 DGKEP52429 567 aa5.52□□□□□ -1.53
HMGB1P1-201ENST00000522557 VAV2P52735 878 aa5.52□□□□□ -1.53
HMGB1P1-201ENST00000522557 BLOC1S1P78537 153 aa5.52□□□□□ -1.53
HMGB1P1-201ENST00000522557 MC2RQ01718 297 aa5.52□□□□□ -1.53
HMGB1P1-201ENST00000522557 IQCB1Q15051 598 aa5.52□□□□□ -1.53
HMGB1P1-201ENST00000522557 TRIM60Q495X7 471 aa5.52□□□□□ -1.53
HMGB1P1-201ENST00000522557 AMOTQ4VCS5 1084 aa5.52□□□□□ -1.53
HMGB1P1-201ENST00000522557 ARHGAP15Q53QZ3 475 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms