RNA–Protein interactions for RNA: ENST00000522411.5

LSS-211, Transcript of lanosterol synthase, humanhuman

TSL 2 BASIC

Gene LSS, Length 2,523 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-211ENST00000522411 SATB1Q01826 763 aa14.98□□□□□ -0.01
LSS-211ENST00000522411 TAP1Q03518 808 aa14.98□□□□□ -0.01
LSS-211ENST00000522411 SUPT20HL1Q3ZLR7 823 aa14.98□□□□□ -0.01
LSS-211ENST00000522411 SNRNP48Q6IEG0 339 aaKnown RBP14.98□□□□□ -0.01
LSS-211ENST00000522411 XRRA1Q6P2D8 792 aa14.98□□□□□ -0.01
LSS-211ENST00000522411 NPNTQ6UXI9 565 aa14.98□□□□□ -0.01
LSS-211ENST00000522411 CDHR3Q6ZTQ4 885 aa14.98□□□□□ -0.01
LSS-211ENST00000522411 PRPF39Q86UA1 669 aaKnown RBP14.98□□□□□ -0.01
LSS-211ENST00000522411 NSUN6Q8TEA1 469 aaKnown RBP14.98□□□□□ -0.01
LSS-211ENST00000522411 HSPH1Q92598 858 aa14.98□□□□□ -0.01
LSS-211ENST00000522411 TUBB6Q9BUF5 446 aa14.98□□□□□ -0.01
LSS-211ENST00000522411 SPATS2LQ9NUQ6 558 aaKnown RBP14.98□□□□□ -0.01
LSS-211ENST00000522411 FCHO1O14526 889 aa14.98□□□□□ -0.01
LSS-211ENST00000522411 INHBAP08476 426 aa14.98□□□□□ -0.01
LSS-211ENST00000522411 KRT7P08729 469 aa14.98□□□□□ -0.01
LSS-211ENST00000522411 RBP3P10745 1247 aa14.98□□□□□ -0.01
LSS-211ENST00000522411 CD19P15391 556 aa14.98□□□□□ -0.01
LSS-211ENST00000522411 ABCD1P33897 745 aa14.98□□□□□ -0.01
LSS-211ENST00000522411 ARL2P36404 184 aa14.98□□□□□ -0.01
LSS-211ENST00000522411 RFC5P40937 340 aa14.98□□□□□ -0.01
LSS-211ENST00000522411 ZNF200P98182 395 aaPredicted RBP14.98□□□□□ -0.01
LSS-211ENST00000522411 ORC1Q13415 861 aa14.98□□□□□ -0.01
LSS-211ENST00000522411 GNPTABQ3T906 1256 aa14.98□□□□□ -0.01
LSS-211ENST00000522411 ZC3H18Q86VM9 953 aaKnown RBP14.98□□□□□ -0.01
LSS-211ENST00000522411 TTC13Q8NBP0 860 aa14.98□□□□□ -0.01
LSS-211ENST00000522411 ZBTB10Q96DT7 871 aa14.98□□□□□ -0.01
LSS-211ENST00000522411 OXNAD1Q96HP4 312 aaPredicted RBP14.98□□□□□ -0.01
LSS-211ENST00000522411 APOPT1Q96IL0 206 aa14.98□□□□□ -0.01
LSS-211ENST00000522411 MECRQ9BV79 373 aa14.98□□□□□ -0.01
LSS-211ENST00000522411 ZNF518BQ9C0D4 1074 aa14.98□□□□□ -0.01
LSS-211ENST00000522411 NMUR2Q9GZQ4 415 aa14.98□□□□□ -0.01
LSS-211ENST00000522411 DHX33Q9H6R0 707 aaKnown RBP14.98□□□□□ -0.01
LSS-211ENST00000522411 TGDSO95455 350 aa14.97□□□□□ -0.01
LSS-211ENST00000522411 PSMC1P62191 440 aaKnown RBP14.97□□□□□ -0.01
LSS-211ENST00000522411 SLC18A2Q05940 514 aa14.97□□□□□ -0.01
LSS-211ENST00000522411 SLC34A1Q06495 639 aa14.97□□□□□ -0.01
LSS-211ENST00000522411 MMRN1Q13201 1228 aa14.97□□□□□ -0.01
LSS-211ENST00000522411 THOC5Q13769 683 aaKnown RBP14.97□□□□□ -0.01
LSS-211ENST00000522411 RCN2Q14257 317 aa14.97□□□□□ -0.01
LSS-211ENST00000522411 HADHQ16836 314 aaKnown RBP14.97□□□□□ -0.01
LSS-211ENST00000522411 CCDC62Q6P9F0 684 aa14.97□□□□□ -0.01
LSS-211ENST00000522411 LRRC74BQ6ZQY2 392 aa14.97□□□□□ -0.01
LSS-211ENST00000522411 CHSY1Q86X52 802 aa14.97□□□□□ -0.01
LSS-211ENST00000522411 FBXO27Q8NI29 283 aa14.97□□□□□ -0.01
LSS-211ENST00000522411 SPATA18Q8TC71 538 aa14.97□□□□□ -0.01
LSS-211ENST00000522411 SLC44A1Q8WWI5 657 aa14.97□□□□□ -0.01
LSS-211ENST00000522411 CALN1Q9BXU9 219 aa14.97□□□□□ -0.01
LSS-211ENST00000522411 PHACTR1Q9C0D0 580 aa14.97□□□□□ -0.01
LSS-211ENST00000522411 NIF3L1Q9GZT8 377 aa14.97□□□□□ -0.01
LSS-211ENST00000522411 ZNF395Q9H8N7 513 aaPredicted RBP14.97□□□□□ -0.01
LSS-211ENST00000522411 PIDD1Q9HB75 910 aa14.97□□□□□ -0.01
LSS-211ENST00000522411 ZNF302Q9NR11 478 aa14.97□□□□□ -0.01
LSS-211ENST00000522411 EFR3BQ9Y2G0 817 aa14.97□□□□□ -0.01
LSS-211ENST00000522411 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.97□□□□□ -0.01
LSS-211ENST00000522411 SMIM24O75264 130 aa14.97□□□□□ -0.01
LSS-211ENST00000522411 ATG7O95352 703 aa14.97□□□□□ -0.01
LSS-211ENST00000522411 SP100P23497 879 aaPredicted RBP14.97□□□□□ -0.01
LSS-211ENST00000522411 CDH5P33151 784 aaPredicted RBP14.97□□□□□ -0.01
LSS-211ENST00000522411 SERPINB4P48594 390 aa14.97□□□□□ -0.01
LSS-211ENST00000522411 MDH1BQ5I0G3 518 aa14.97□□□□□ -0.01
LSS-211ENST00000522411 THNSL1Q8IYQ7 743 aa14.97□□□□□ -0.01
LSS-211ENST00000522411 TRPM4Q8TD43 1214 aa14.97□□□□□ -0.01
LSS-211ENST00000522411 SLC7A3Q8WY07 619 aa14.97□□□□□ -0.01
LSS-211ENST00000522411 SYNCQ9H7C4 482 aa14.97□□□□□ -0.01
LSS-211ENST00000522411 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.97□□□□□ -0.019e-7■■□□□ 12.5
LSS-211ENST00000522411 CNTN3Q9P232 1028 aa14.97□□□□□ -0.01
LSS-211ENST00000522411 STRIP2Q9ULQ0 834 aa14.97□□□□□ -0.01
LSS-211ENST00000522411 FZD1Q9UP38 647 aa14.97□□□□□ -0.01
LSS-211ENST00000522411 OATP04181 439 aa14.96□□□□□ -0.01
LSS-211ENST00000522411 RARBP10826 455 aa14.96□□□□□ -0.01
LSS-211ENST00000522411 AMPD1P23109 780 aa14.96□□□□□ -0.01
LSS-211ENST00000522411 PGM1P36871 562 aa14.96□□□□□ -0.01
LSS-211ENST00000522411 RAP1GAPP47736 663 aa14.96□□□□□ -0.01
LSS-211ENST00000522411 GCLCP48506 637 aaPredicted RBP14.96□□□□□ -0.01
LSS-211ENST00000522411 TFAMQ00059 246 aaKnown RBP14.96□□□□□ -0.01
LSS-211ENST00000522411 CAPSQ13938 189 aa14.96□□□□□ -0.01
LSS-211ENST00000522411 HSF5Q4G112 596 aaPredicted RBP14.96□□□□□ -0.01
LSS-211ENST00000522411 RNF220Q5VTB9 566 aa14.96□□□□□ -0.01
LSS-211ENST00000522411 BRSK2Q8IWQ3 736 aa14.96□□□□□ -0.01
LSS-211ENST00000522411 TMEM130Q8N3G9 435 aa14.96□□□□□ -0.01
LSS-211ENST00000522411 PDCD7Q8N8D1 485 aaKnown RBP14.96□□□□□ -0.01
LSS-211ENST00000522411 CFAP36Q96G28 342 aa14.96□□□□□ -0.01
LSS-211ENST00000522411 ARHGEF4Q9NR80 690 aa14.96□□□□□ -0.01
LSS-211ENST00000522411 NXF1Q9UBU9 619 aaKnown RBP14.96□□□□□ -0.01
LSS-211ENST00000522411 PCDHGC3Q9UN70 934 aa14.96□□□□□ -0.01
LSS-211ENST00000522411 POLIQ9UNA4 740 aa14.96□□□□□ -0.01
LSS-211ENST00000522411 WASF2Q9Y6W5 498 aa14.96□□□□□ -0.01
LSS-211ENST00000522411 SBF1O95248 1867 aa14.96□□□□□ -0.01
LSS-211ENST00000522411 B2RBV5 119 aa14.96□□□□□ -0.02
LSS-211ENST00000522411 MIPP30301 263 aa14.96□□□□□ -0.02
LSS-211ENST00000522411 TRPC3Q13507 836 aa14.96□□□□□ -0.02
LSS-211ENST00000522411 LBRQ14739 615 aaKnown RBP14.96□□□□□ -0.02
LSS-211ENST00000522411 KRT72Q14CN4 511 aa14.96□□□□□ -0.02
LSS-211ENST00000522411 TAZQ16635 292 aa14.96□□□□□ -0.02
LSS-211ENST00000522411 SGSM1Q2NKQ1 1148 aa14.96□□□□□ -0.02
LSS-211ENST00000522411 DARS2Q6PI48 645 aaKnown RBP14.96□□□□□ -0.02
LSS-211ENST00000522411 WDR49Q8IV35 697 aa14.96□□□□□ -0.02
LSS-211ENST00000522411 CTAGE3PQ8IX95 158 aa14.96□□□□□ -0.02
LSS-211ENST00000522411 STMN2Q93045 179 aa14.96□□□□□ -0.02
LSS-211ENST00000522411 SRPK1Q96SB4 655 aaKnown RBP14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms