RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 SCAMP5Q8TAC9 235 aa14.11□□□□□ -0.15
CLK4-210ENST00000522136 PIWIL1Q96J94 861 aaKnown RBP14.11□□□□□ -0.15
CLK4-210ENST00000522136 VCPIP1Q96JH7 1222 aa14.11□□□□□ -0.15
CLK4-210ENST00000522136 HSFY1Q96LI6 401 aa14.11□□□□□ -0.15
CLK4-210ENST00000522136 EMILIN2Q9BXX0 1053 aa14.11□□□□□ -0.15
CLK4-210ENST00000522136 CYP4F11Q9HBI6 524 aa14.11□□□□□ -0.15
CLK4-210ENST00000522136 MACROD2A1Z1Q3 448 aa14.1□□□□□ -0.15
CLK4-210ENST00000522136 PER2O15055 1255 aa14.1□□□□□ -0.15
CLK4-210ENST00000522136 PAPSS1O43252 624 aaPredicted RBP14.1□□□□□ -0.15
CLK4-210ENST00000522136 CYP1A2P05177 515 aa14.1□□□□□ -0.15
CLK4-210ENST00000522136 RPL34P49207 117 aaKnown RBP14.1□□□□□ -0.15
CLK4-210ENST00000522136 IFRD2Q12894 506 aaPredicted RBP14.1□□□□□ -0.15
CLK4-210ENST00000522136 LIN9Q5TKA1 542 aa14.1□□□□□ -0.15
CLK4-210ENST00000522136 OR6B2Q6IFH4 312 aa14.1□□□□□ -0.15
CLK4-210ENST00000522136 FAM183BPQ6ZVS7 135 aa14.1□□□□□ -0.15
CLK4-210ENST00000522136 SLC35G2Q8TBE7 412 aa14.1□□□□□ -0.15
CLK4-210ENST00000522136 IPO4Q8TEX9 1081 aaKnown RBP14.1□□□□□ -0.15
CLK4-210ENST00000522136 GIPC2Q8TF65 315 aa14.1□□□□□ -0.15
CLK4-210ENST00000522136 C2orf15Q8WU43 125 aaKnown RBP14.1□□□□□ -0.15
CLK4-210ENST00000522136 KCTD13Q8WZ19 329 aa14.1□□□□□ -0.15
CLK4-210ENST00000522136 LRRC4Q9HBW1 653 aa14.1□□□□□ -0.15
CLK4-210ENST00000522136 OSGEPQ9NPF4 335 aa14.1□□□□□ -0.15
CLK4-210ENST00000522136 PATJQ8NI35 1801 aa14.1□□□□□ -0.15
CLK4-210ENST00000522136 COL4A4P53420 1690 aaPredicted RBP14.09□□□□□ -0.15
CLK4-210ENST00000522136 GREB1Q4ZG55 1949 aa14.09□□□□□ -0.15
CLK4-210ENST00000522136 TCRBV5S1A1TA0A578 114 aa14.09□□□□□ -0.15
CLK4-210ENST00000522136 BUB1O43683 1085 aa14.09□□□□□ -0.15
CLK4-210ENST00000522136 LPXNO60711 386 aa14.09□□□□□ -0.15
CLK4-210ENST00000522136 ADH1AP07327 375 aa14.09□□□□□ -0.15
CLK4-210ENST00000522136 ATF6P18850 670 aa14.09□□□□□ -0.15
CLK4-210ENST00000522136 TKTL1P51854 596 aa14.09□□□□□ -0.15
CLK4-210ENST00000522136 TAF5Q15542 800 aa14.09□□□□□ -0.15
CLK4-210ENST00000522136 RAB41Q5JT25 222 aa14.09□□□□□ -0.15
CLK4-210ENST00000522136 PPP1R2P3Q6NXS1 205 aa14.09□□□□□ -0.15
CLK4-210ENST00000522136 LILRA6Q6PI73 481 aa14.09□□□□□ -0.15
CLK4-210ENST00000522136 ADGRD2Q7Z7M1 963 aa14.09□□□□□ -0.15
CLK4-210ENST00000522136 RBM23Q86U06 439 aaKnown RBP14.09□□□□□ -0.15
CLK4-210ENST00000522136 MSANTD4Q8NCY6 345 aa14.09□□□□□ -0.15
CLK4-210ENST00000522136 C8orf48Q96LL4 319 aa14.09□□□□□ -0.15
CLK4-210ENST00000522136 IRX2Q9BZI1 471 aaPredicted RBP14.09□□□□□ -0.15
CLK4-210ENST00000522136 UBXN6Q9BZV1 441 aa14.09□□□□□ -0.15
CLK4-210ENST00000522136 TRIM7Q9C029 511 aa14.09□□□□□ -0.15
CLK4-210ENST00000522136 COG5Q9UP83 839 aa14.09□□□□□ -0.15
CLK4-210ENST00000522136 ZNF638Q14966 1978 aaKnown RBP14.09□□□□□ -0.15
CLK4-210ENST00000522136 PRRG1O14668 218 aa14.09□□□□□ -0.15
CLK4-210ENST00000522136 TNFRSF10BO14763 440 aa14.09□□□□□ -0.15
CLK4-210ENST00000522136 TRIM66O15016 1216 aa14.09□□□□□ -0.15
CLK4-210ENST00000522136 USP17L7P0C7H9 530 aa14.09□□□□□ -0.15
CLK4-210ENST00000522136 MYBL1P10243 752 aa14.09□□□□□ -0.15
CLK4-210ENST00000522136 ELF1P32519 619 aa14.09□□□□□ -0.15
CLK4-210ENST00000522136 ACADSBP45954 432 aa14.09□□□□□ -0.15
CLK4-210ENST00000522136 SLC5A3P53794 718 aa14.09□□□□□ -0.15
CLK4-210ENST00000522136 MAMLD1Q13495 774 aa14.09□□□□□ -0.15
CLK4-210ENST00000522136 MTMR3Q13615 1198 aa14.09□□□□□ -0.15
CLK4-210ENST00000522136 ZNF268Q14587 947 aaPredicted RBP14.09□□□□□ -0.15
CLK4-210ENST00000522136 LRIT3Q3SXY7 679 aa14.09□□□□□ -0.15
CLK4-210ENST00000522136 ARHGAP29Q52LW3 1261 aa14.09□□□□□ -0.15
CLK4-210ENST00000522136 PLEKHA7Q6IQ23 1121 aa14.09□□□□□ -0.15
CLK4-210ENST00000522136 MCRS1Q96EZ8 462 aa14.09□□□□□ -0.15
CLK4-210ENST00000522136 TRIM11Q96F44 468 aa14.09□□□□□ -0.15
CLK4-210ENST00000522136 NUP85Q9BW27 656 aa14.09□□□□□ -0.15
CLK4-210ENST00000522136 ULBP1Q9BZM6 244 aa14.09□□□□□ -0.15
CLK4-210ENST00000522136 ZNF576Q9H609 170 aa14.09□□□□□ -0.15
CLK4-210ENST00000522136 KCND1Q9NSA2 647 aa14.09□□□□□ -0.15
CLK4-210ENST00000522136 CTTNBP2NLQ9P2B4 639 aa14.09□□□□□ -0.15
CLK4-210ENST00000522136 MTCL1Q9Y4B5 1905 aaKnown RBP14.08□□□□□ -0.15
CLK4-210ENST00000522136 NCANO14594 1321 aa14.08□□□□□ -0.16
CLK4-210ENST00000522136 KRT86O43790 486 aa14.08□□□□□ -0.16
CLK4-210ENST00000522136 CLASP2O75122 1294 aaKnown RBP14.08□□□□□ -0.16
CLK4-210ENST00000522136 GRAP2O75791 330 aa14.08□□□□□ -0.16
CLK4-210ENST00000522136 MOCS3O95396 460 aa14.08□□□□□ -0.16
CLK4-210ENST00000522136 NOP2P46087 812 aaKnown RBP14.08□□□□□ -0.16
CLK4-210ENST00000522136 CLCN4P51793 760 aa14.08□□□□□ -0.16
CLK4-210ENST00000522136 USP46P62068 366 aa14.08□□□□□ -0.16
CLK4-210ENST00000522136 FAM102AQ5T9C2 384 aaPredicted RBP14.08□□□□□ -0.16
CLK4-210ENST00000522136 OLFML1Q6UWY5 402 aa14.08□□□□□ -0.16
CLK4-210ENST00000522136 ZNF662Q6ZS27 426 aa14.08□□□□□ -0.16
CLK4-210ENST00000522136 SIX6OS1Q8N1H7 587 aa14.08□□□□□ -0.16
CLK4-210ENST00000522136 RFFLQ8WZ73 363 aa14.08□□□□□ -0.16
CLK4-210ENST00000522136 BTBD6Q96KE9 485 aa14.08□□□□□ -0.16
CLK4-210ENST00000522136 PNPLA8Q9NP80 782 aa14.08□□□□□ -0.16
CLK4-210ENST00000522136 CYLDQ9NQC7 956 aa14.08□□□□□ -0.16
CLK4-210ENST00000522136 AVENQ9NQS1 362 aaPredicted RBP14.08□□□□□ -0.16
CLK4-210ENST00000522136 STRIP2Q9ULQ0 834 aa14.08□□□□□ -0.16
CLK4-210ENST00000522136 YIPF1Q9Y548 306 aa14.08□□□□□ -0.16
CLK4-210ENST00000522136 MSNP26038 577 aaKnown RBP14.07□□□□□ -0.16
CLK4-210ENST00000522136 TUFMP49411 452 aaKnown RBP14.07□□□□□ -0.16
CLK4-210ENST00000522136 NAP1L1P55209 391 aaKnown RBP14.07□□□□□ -0.16
CLK4-210ENST00000522136 RNASE9P60153 205 aaKnown RBP14.07□□□□□ -0.16
CLK4-210ENST00000522136 RPL7AP62424 266 aaKnown RBP14.07□□□□□ -0.16
CLK4-210ENST00000522136 RPL10AP62906 217 aaKnown RBP14.07□□□□□ -0.16
CLK4-210ENST00000522136 PDE12Q6L8Q7 609 aaKnown RBP14.07□□□□□ -0.16
CLK4-210ENST00000522136 DNAJC24Q6P3W2 148 aa14.07□□□□□ -0.16
CLK4-210ENST00000522136 TCEAL8Q8IYN2 117 aa14.07□□□□□ -0.16
CLK4-210ENST00000522136 NUP93Q8N1F7 819 aa14.07□□□□□ -0.16
CLK4-210ENST00000522136 TXLNBQ8N3L3 684 aa14.07□□□□□ -0.16
CLK4-210ENST00000522136 KREMEN2Q8NCW0 462 aa14.07□□□□□ -0.16
CLK4-210ENST00000522136 C3orf20Q8ND61 904 aa14.07□□□□□ -0.16
CLK4-210ENST00000522136 JOSD2Q8TAC2 188 aa14.07□□□□□ -0.16
CLK4-210ENST00000522136 KHSRPQ92945 711 aaKnown RBP eCLIP14.07□□□□□ -0.163e-6■■■□□ 16.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms