RNA–Protein interactions for RNA: ENST00000522052.5

CTNNA1-233, Transcript of catenin alpha 1, human

TSL 4

Gene CTNNA1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-233	ENST00000522052	FAM90A5P	A8MXJ8	464 aa		5.73	□□□□□ -1.49
CTNNA1-233	ENST00000522052	NPIPB6	E9PJ23	425 aa		5.73	□□□□□ -1.49
CTNNA1-233	ENST00000522052	LEFTY2	O00292	366 aa		5.73	□□□□□ -1.49
CTNNA1-233	ENST00000522052	TOR1B	O14657	336 aa		5.73	□□□□□ -1.49
CTNNA1-233	ENST00000522052	ZSCAN9	O15535	394 aa	Predicted RBP	5.73	□□□□□ -1.49
CTNNA1-233	ENST00000522052	LAMTOR5	O43504	91 aa		5.73	□□□□□ -1.49
CTNNA1-233	ENST00000522052	BAIAP3	O94812	1187 aa		5.73	□□□□□ -1.49
CTNNA1-233	ENST00000522052	HLA-DOA	P06340	250 aa		5.73	□□□□□ -1.49
CTNNA1-233	ENST00000522052	FAM90A15P	P0C7V4	464 aa		5.73	□□□□□ -1.49
CTNNA1-233	ENST00000522052	FAM90A14P	P0C7W9	464 aa		5.73	□□□□□ -1.49
CTNNA1-233	ENST00000522052	HGF	P14210	728 aa		5.73	□□□□□ -1.49
CTNNA1-233	ENST00000522052	CAPN3	P20807	821 aa		5.73	□□□□□ -1.49
CTNNA1-233	ENST00000522052	FGFR4	P22455	802 aa		5.73	□□□□□ -1.49
CTNNA1-233	ENST00000522052	AKT1	P31749	480 aa		5.73	□□□□□ -1.49
CTNNA1-233	ENST00000522052	CCR5	P51681	352 aa		5.73	□□□□□ -1.49
CTNNA1-233	ENST00000522052	RABGGTB	P53611	331 aa		5.73	□□□□□ -1.49
CTNNA1-233	ENST00000522052	SLC12A1	Q13621	1099 aa		5.73	□□□□□ -1.49
CTNNA1-233	ENST00000522052	CCNI	Q14094	377 aa		5.73	□□□□□ -1.49
CTNNA1-233	ENST00000522052	BTBD16	Q32M84	506 aa		5.73	□□□□□ -1.49
CTNNA1-233	ENST00000522052	CERCAM	Q5T4B2	595 aa		5.73	□□□□□ -1.49
CTNNA1-233	ENST00000522052	TTC22	Q5TAA0	569 aa		5.73	□□□□□ -1.49
CTNNA1-233	ENST00000522052	ARHGAP40	Q5TG30	622 aa		5.73	□□□□□ -1.49
CTNNA1-233	ENST00000522052	SFRP4	Q6FHJ7	346 aa	Predicted RBP	5.73	□□□□□ -1.49
CTNNA1-233	ENST00000522052	HTR3D	Q70Z44	454 aa		5.73	□□□□□ -1.49
CTNNA1-233	ENST00000522052	ANKS1B	Q7Z6G8	1248 aa		5.73	□□□□□ -1.49
CTNNA1-233	ENST00000522052	TBC1D1	Q86TI0	1168 aa	Predicted RBP	5.73	□□□□□ -1.49
CTNNA1-233	ENST00000522052	TTC30A	Q86WT1	665 aa		5.73	□□□□□ -1.49
CTNNA1-233	ENST00000522052	SIAH1	Q8IUQ4	282 aa		5.73	□□□□□ -1.49
CTNNA1-233	ENST00000522052	SLC15A3	Q8IY34	581 aa		5.73	□□□□□ -1.49
CTNNA1-233	ENST00000522052	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	5.73	□□□□□ -1.49
CTNNA1-233	ENST00000522052		Q8NA96	180 aa		5.73	□□□□□ -1.49
CTNNA1-233	ENST00000522052	WDR60	Q8WVS4	1066 aa		5.73	□□□□□ -1.49
CTNNA1-233	ENST00000522052	HTRA1	Q92743	480 aa		5.73	□□□□□ -1.49
CTNNA1-233	ENST00000522052	GNRHR2	Q96P88	292 aa		5.73	□□□□□ -1.49
CTNNA1-233	ENST00000522052	VPS16	Q9H269	839 aa		5.73	□□□□□ -1.49
CTNNA1-233	ENST00000522052	ELAC1	Q9H777	363 aa	Known RBP	5.73	□□□□□ -1.49
CTNNA1-233	ENST00000522052	JMJD4	Q9H9V9	463 aa		5.73	□□□□□ -1.49
CTNNA1-233	ENST00000522052	G6PC2	Q9NQR9	355 aa		5.73	□□□□□ -1.49
CTNNA1-233	ENST00000522052	C19orf53	Q9UNZ5	99 aa	Predicted RBP	5.73	□□□□□ -1.49
CTNNA1-233	ENST00000522052	EFCAB8	A8MWE9	144 aa		5.72	□□□□□ -1.49
CTNNA1-233	ENST00000522052		B4E171	279 aa		5.72	□□□□□ -1.49
CTNNA1-233	ENST00000522052	DIRC3	C9JPN6	131 aa		5.72	□□□□□ -1.49
CTNNA1-233	ENST00000522052	NUAK1	O60285	661 aa		5.72	□□□□□ -1.49
CTNNA1-233	ENST00000522052	GPANK1	O95872	356 aa		5.72	□□□□□ -1.49
CTNNA1-233	ENST00000522052	CSF1R	P07333	972 aa		5.72	□□□□□ -1.49
CTNNA1-233	ENST00000522052	IFIT1	P09914	478 aa	Known RBP	5.72	□□□□□ -1.49
CTNNA1-233	ENST00000522052	RXRA	P19793	462 aa		5.72	□□□□□ -1.49
CTNNA1-233	ENST00000522052	PRKAR1B	P31321	381 aa		5.72	□□□□□ -1.49
CTNNA1-233	ENST00000522052	ZEB1	P37275	1124 aa	Predicted RBP	5.72	□□□□□ -1.49
CTNNA1-233	ENST00000522052	TSPAN7	P41732	249 aa		5.72	□□□□□ -1.49
CTNNA1-233	ENST00000522052	NDUFV1	P49821	464 aa		5.72	□□□□□ -1.49
CTNNA1-233	ENST00000522052	PGD	P52209	483 aa		5.72	□□□□□ -1.49
CTNNA1-233	ENST00000522052	HSD11B2	P80365	405 aa		5.72	□□□□□ -1.49
CTNNA1-233	ENST00000522052	OCA2	Q04671	838 aa		5.72	□□□□□ -1.49
CTNNA1-233	ENST00000522052	CHRND	Q07001	517 aa		5.72	□□□□□ -1.49
CTNNA1-233	ENST00000522052	MAPK7	Q13164	816 aa		5.72	□□□□□ -1.49
CTNNA1-233	ENST00000522052	DLGAP5	Q15398	846 aa		5.72	□□□□□ -1.49
CTNNA1-233	ENST00000522052	L1TD1	Q5T7N2	865 aa	Known RBP	5.72	□□□□□ -1.49
CTNNA1-233	ENST00000522052	RGS7BP	Q6MZT1	257 aa	Predicted RBP	5.72	□□□□□ -1.49
CTNNA1-233	ENST00000522052	MZT2B	Q6NZ67	158 aa		5.72	□□□□□ -1.49
CTNNA1-233	ENST00000522052	FOXR2	Q6PJQ5	311 aa		5.72	□□□□□ -1.49
CTNNA1-233	ENST00000522052	CLNK	Q7Z7G1	428 aa		5.72	□□□□□ -1.49
CTNNA1-233	ENST00000522052	SP8	Q8IXZ3	490 aa		5.72	□□□□□ -1.49
CTNNA1-233	ENST00000522052	GSPT2	Q8IYD1	628 aa	Known RBP	5.72	□□□□□ -1.49
CTNNA1-233	ENST00000522052	FUK	Q8N0W3	1084 aa		5.72	□□□□□ -1.49
CTNNA1-233	ENST00000522052	TMEM57	Q8N5G2	664 aa		5.72	□□□□□ -1.49
CTNNA1-233	ENST00000522052	C3orf49	Q96BT1	292 aa		5.72	□□□□□ -1.49
CTNNA1-233	ENST00000522052	HIST1H2AA	Q96QV6	131 aa		5.72	□□□□□ -1.49
CTNNA1-233	ENST00000522052	TWNK	Q96RR1	684 aa		5.72	□□□□□ -1.49
CTNNA1-233	ENST00000522052	ZSWIM1	Q9BR11	485 aa		5.72	□□□□□ -1.49
CTNNA1-233	ENST00000522052	INO80B	Q9C086	356 aa	Predicted RBP	5.72	□□□□□ -1.49
CTNNA1-233	ENST00000522052	OSBPL5	Q9H0X9	879 aa	Predicted RBP	5.72	□□□□□ -1.49
CTNNA1-233	ENST00000522052	ALG13	Q9NP73	1137 aa	Known RBP	5.72	□□□□□ -1.49
CTNNA1-233	ENST00000522052	FSCN3	Q9NQT6	498 aa		5.72	□□□□□ -1.49
CTNNA1-233	ENST00000522052	CCDC196	A0A1B0GTZ2	297 aa		5.71	□□□□□ -1.5
CTNNA1-233	ENST00000522052		A0A1W2PS29	197 aa		5.71	□□□□□ -1.5
CTNNA1-233	ENST00000522052	BTBD11	A6QL63	1104 aa		5.71	□□□□□ -1.5
CTNNA1-233	ENST00000522052	PRSS47	A8MTI9	375 aa		5.71	□□□□□ -1.5
CTNNA1-233	ENST00000522052	ADM5	C9JUS6	153 aa		5.71	□□□□□ -1.5
CTNNA1-233	ENST00000522052		E7EVH7	732 aa		5.71	□□□□□ -1.5
CTNNA1-233	ENST00000522052	PPP6R2	O75170	966 aa		5.71	□□□□□ -1.5
CTNNA1-233	ENST00000522052	TAF5L	O75529	589 aa		5.71	□□□□□ -1.5
CTNNA1-233	ENST00000522052	RNASEH2A	O75792	299 aa	Known RBP	5.71	□□□□□ -1.5
CTNNA1-233	ENST00000522052	ATP1A3	P13637	1013 aa		5.71	□□□□□ -1.5
CTNNA1-233	ENST00000522052	UQCRC1	P31930	480 aa		5.71	□□□□□ -1.5
CTNNA1-233	ENST00000522052	APOBEC3A	P31941	199 aa	Predicted RBP	5.71	□□□□□ -1.5
CTNNA1-233	ENST00000522052	CDK7	P50613	346 aa		5.71	□□□□□ -1.5
CTNNA1-233	ENST00000522052	RNASE9	P60153	205 aa	Known RBP	5.71	□□□□□ -1.5
CTNNA1-233	ENST00000522052	DYRK1A	Q13627	763 aa		5.71	□□□□□ -1.5
CTNNA1-233	ENST00000522052	FHL3	Q13643	280 aa		5.71	□□□□□ -1.5
CTNNA1-233	ENST00000522052	HLX	Q14774	488 aa	Predicted RBP	5.71	□□□□□ -1.5
CTNNA1-233	ENST00000522052	MAP3K21	Q5TCX8	1036 aa		5.71	□□□□□ -1.5
CTNNA1-233	ENST00000522052	TCTN3	Q6NUS6	607 aa		5.71	□□□□□ -1.5
CTNNA1-233	ENST00000522052	RINL	Q6ZS11	566 aa		5.71	□□□□□ -1.5
CTNNA1-233	ENST00000522052	BBS12	Q6ZW61	710 aa		5.71	□□□□□ -1.5
CTNNA1-233	ENST00000522052	POLN	Q7Z5Q5	900 aa		5.71	□□□□□ -1.5
CTNNA1-233	ENST00000522052	TSPYL6	Q8N831	410 aa		5.71	□□□□□ -1.5
CTNNA1-233	ENST00000522052	CEP70	Q8NHQ1	597 aa		5.71	□□□□□ -1.5
CTNNA1-233	ENST00000522052	TMEM171	Q8WVE6	324 aa		5.71	□□□□□ -1.5
CTNNA1-233	ENST00000522052	GOLGA1	Q92805	767 aa		5.71	□□□□□ -1.5

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