RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 BCL9O00512 1426 aa3.98□□□□□ -1.77
VPS13B-209ENST00000521559 RGS12O14924 1447 aa3.98□□□□□ -1.77
VPS13B-209ENST00000521559 ERVV-2B6SEH9 535 aa3.98□□□□□ -1.77
VPS13B-209ENST00000521559 E9PLN8 166 aa3.98□□□□□ -1.77
VPS13B-209ENST00000521559 APAF1O14727 1248 aa3.98□□□□□ -1.77
VPS13B-209ENST00000521559 RNMTO43148 476 aaKnown RBP3.98□□□□□ -1.77
VPS13B-209ENST00000521559 CDK4P11802 303 aa3.98□□□□□ -1.77
VPS13B-209ENST00000521559 PPP3CBP16298 524 aa3.98□□□□□ -1.77
VPS13B-209ENST00000521559 GPD1P21695 349 aa3.98□□□□□ -1.77
VPS13B-209ENST00000521559 PTH2RP49190 550 aa3.98□□□□□ -1.77
VPS13B-209ENST00000521559 NDUFV1P49821 464 aa3.98□□□□□ -1.77
VPS13B-209ENST00000521559 ZNF135P52742 658 aaPredicted RBP3.98□□□□□ -1.77
VPS13B-209ENST00000521559 RIPK4P57078 832 aa3.98□□□□□ -1.77
VPS13B-209ENST00000521559 BRDTQ58F21 947 aaPredicted RBP3.98□□□□□ -1.77
VPS13B-209ENST00000521559 TEDDM1Q5T9Z0 273 aa3.98□□□□□ -1.77
VPS13B-209ENST00000521559 SLC30A10Q6XR72 485 aa3.98□□□□□ -1.77
VPS13B-209ENST00000521559 TMPRSS9Q7Z410 1059 aa3.98□□□□□ -1.77
VPS13B-209ENST00000521559 HEATR3Q7Z4Q2 680 aa3.98□□□□□ -1.77
VPS13B-209ENST00000521559 PEG10Q86TG7 708 aaKnown RBP3.98□□□□□ -1.77
VPS13B-209ENST00000521559 FAM90A1Q86YD7 464 aa3.98□□□□□ -1.77
VPS13B-209ENST00000521559 IL17REQ8NFR9 667 aa3.98□□□□□ -1.77
VPS13B-209ENST00000521559 MYCBPAPQ8TBZ2 947 aa3.98□□□□□ -1.77
VPS13B-209ENST00000521559 TNPO1Q92973 898 aaKnown RBP3.98□□□□□ -1.77
VPS13B-209ENST00000521559 VKORC1Q9BQB6 163 aa3.98□□□□□ -1.77
VPS13B-209ENST00000521559 TPSD1Q9BZJ3 242 aa3.98□□□□□ -1.77
VPS13B-209ENST00000521559 KLK15Q9H2R5 256 aa3.98□□□□□ -1.77
VPS13B-209ENST00000521559 PRDM13Q9H4Q3 707 aa3.98□□□□□ -1.77
VPS13B-209ENST00000521559 TCF7L1Q9HCS4 588 aa3.98□□□□□ -1.77
VPS13B-209ENST00000521559 LMBRD1Q9NUN5 540 aa3.98□□□□□ -1.77
VPS13B-209ENST00000521559 PNPOQ9NVS9 261 aa3.98□□□□□ -1.77
VPS13B-209ENST00000521559 VSX1Q9NZR4 365 aaPredicted RBP3.98□□□□□ -1.77
VPS13B-209ENST00000521559 ABCF2Q9UG63 623 aa3.98□□□□□ -1.77
VPS13B-209ENST00000521559 ANKRD6Q9Y2G4 727 aa3.98□□□□□ -1.77
VPS13B-209ENST00000521559 RAD54BQ9Y620 910 aa3.98□□□□□ -1.77
VPS13B-209ENST00000521559 COL11A2P13942 1736 aaPredicted RBP3.98□□□□□ -1.77
VPS13B-209ENST00000521559 NWD2Q9ULI1 1742 aa3.98□□□□□ -1.77
VPS13B-209ENST00000521559 TNS2Q63HR2 1409 aa3.97□□□□□ -1.77
VPS13B-209ENST00000521559 MGST3O14880 152 aa3.97□□□□□ -1.77
VPS13B-209ENST00000521559 TTLL1O95922 423 aa3.97□□□□□ -1.77
VPS13B-209ENST00000521559 CHRM2P08172 466 aa3.97□□□□□ -1.77
VPS13B-209ENST00000521559 CT47B1P0C2W7 299 aaPredicted RBP3.97□□□□□ -1.77
VPS13B-209ENST00000521559 TYRP14679 529 aa3.97□□□□□ -1.77
VPS13B-209ENST00000521559 LPOP22079 712 aaPredicted RBP3.97□□□□□ -1.77
VPS13B-209ENST00000521559 IL12RB1P42701 662 aa3.97□□□□□ -1.77
VPS13B-209ENST00000521559 NEK2P51955 445 aa3.97□□□□□ -1.77
VPS13B-209ENST00000521559 MAPK10P53779 464 aa3.97□□□□□ -1.77
VPS13B-209ENST00000521559 MC2RQ01718 297 aa3.97□□□□□ -1.77
VPS13B-209ENST00000521559 LMOD3Q0VAK6 560 aa3.97□□□□□ -1.77
VPS13B-209ENST00000521559 TCF15Q12870 199 aa3.97□□□□□ -1.77
VPS13B-209ENST00000521559 SFRP4Q6FHJ7 346 aaPredicted RBP3.97□□□□□ -1.77
VPS13B-209ENST00000521559 TSHZ1Q6ZSZ6 1077 aa3.97□□□□□ -1.77
VPS13B-209ENST00000521559 PTF1AQ7RTS3 328 aa3.97□□□□□ -1.77
VPS13B-209ENST00000521559 USP37Q86T82 979 aa3.97□□□□□ -1.77
VPS13B-209ENST00000521559 NGEFQ8N5V2 710 aa3.97□□□□□ -1.77
VPS13B-209ENST00000521559 PSD4Q8NDX1 1056 aa3.97□□□□□ -1.77
VPS13B-209ENST00000521559 BRIX1Q8TDN6 353 aaKnown RBP3.97□□□□□ -1.77
VPS13B-209ENST00000521559 NTN5Q8WTR8 489 aaPredicted RBP3.97□□□□□ -1.77
VPS13B-209ENST00000521559 PIGBQ92521 554 aa3.97□□□□□ -1.77
VPS13B-209ENST00000521559 MTFMTQ96DP5 389 aaKnown RBP3.97□□□□□ -1.77
VPS13B-209ENST00000521559 LRIG1Q96JA1 1093 aa3.97□□□□□ -1.77
VPS13B-209ENST00000521559 CDK5RAP3Q96JB5 506 aa3.97□□□□□ -1.77
VPS13B-209ENST00000521559 PBKQ96KB5 322 aa3.97□□□□□ -1.77
VPS13B-209ENST00000521559 HAPLN3Q96S86 360 aa3.97□□□□□ -1.77
VPS13B-209ENST00000521559 MAP3K14Q99558 947 aa3.97□□□□□ -1.77
VPS13B-209ENST00000521559 CPNE5Q9HCH3 593 aa3.97□□□□□ -1.77
VPS13B-209ENST00000521559 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.97□□□□□ -1.77
VPS13B-209ENST00000521559 TYW1Q9NV66 732 aaKnown RBP3.97□□□□□ -1.77
VPS13B-209ENST00000521559 ETAA1Q9NY74 926 aa3.97□□□□□ -1.77
VPS13B-209ENST00000521559 EHD3Q9NZN3 535 aa3.97□□□□□ -1.77
VPS13B-209ENST00000521559 RRP7AQ9Y3A4 280 aaKnown RBP3.97□□□□□ -1.77
VPS13B-209ENST00000521559 NRAPQ86VF7 1730 aa3.97□□□□□ -1.77
VPS13B-209ENST00000521559 ANKRD26Q9UPS8 1709 aa3.97□□□□□ -1.77
VPS13B-209ENST00000521559 MAP3K5Q99683 1374 aa3.97□□□□□ -1.77
VPS13B-209ENST00000521559 LRRC14BA6NHZ5 514 aa3.96□□□□□ -1.78
VPS13B-209ENST00000521559 ADM5C9JUS6 153 aa3.96□□□□□ -1.78
VPS13B-209ENST00000521559 URI1O94763 535 aaPredicted RBP3.96□□□□□ -1.78
VPS13B-209ENST00000521559 NXPH3O95157 252 aa3.96□□□□□ -1.78
VPS13B-209ENST00000521559 MATN4O95460 622 aa3.96□□□□□ -1.78
VPS13B-209ENST00000521559 CD6P30203 668 aa3.96□□□□□ -1.78
VPS13B-209ENST00000521559 SATB1Q01826 763 aa3.96□□□□□ -1.78
VPS13B-209ENST00000521559 TEFQ10587 303 aa3.96□□□□□ -1.78
VPS13B-209ENST00000521559 BMPR2Q13873 1038 aa3.96□□□□□ -1.78
VPS13B-209ENST00000521559 DCTN1Q14203 1278 aa3.96□□□□□ -1.78
VPS13B-209ENST00000521559 TAF7Q15545 349 aaPredicted RBP3.96□□□□□ -1.78
VPS13B-209ENST00000521559 TXNRD1Q16881 649 aa3.96□□□□□ -1.78
VPS13B-209ENST00000521559 TSTD2Q5T7W7 516 aa3.96□□□□□ -1.78
VPS13B-209ENST00000521559 KIAA1614Q5VZ46 1190 aa3.96□□□□□ -1.78
VPS13B-209ENST00000521559 FAM160B1Q5W0V3 765 aa3.96□□□□□ -1.78
VPS13B-209ENST00000521559 TAF2Q6P1X5 1199 aa3.96□□□□□ -1.78
VPS13B-209ENST00000521559 MCM10Q7L590 875 aa3.96□□□□□ -1.78
VPS13B-209ENST00000521559 SARAFQ96BY9 339 aa3.96□□□□□ -1.78
VPS13B-209ENST00000521559 FAM136AQ96C01 138 aa3.96□□□□□ -1.78
VPS13B-209ENST00000521559 MVB12AQ96EY5 273 aa3.96□□□□□ -1.78
VPS13B-209ENST00000521559 MOGAT1Q96PD6 335 aa3.96□□□□□ -1.78
VPS13B-209ENST00000521559 THUMPD2Q9BTF0 503 aaKnown RBP3.96□□□□□ -1.78
VPS13B-209ENST00000521559 C1orf43Q9BWL3 253 aa3.96□□□□□ -1.78
VPS13B-209ENST00000521559 AMBRA1Q9C0C7 1298 aa3.96□□□□□ -1.78
VPS13B-209ENST00000521559 TINAGL1Q9GZM7 467 aaPredicted RBP3.96□□□□□ -1.78
VPS13B-209ENST00000521559 MRPL46Q9H2W6 279 aaKnown RBP3.96□□□□□ -1.78
VPS13B-209ENST00000521559 SARS2Q9NP81 518 aaKnown RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms