RNA–Protein interactions for RNA: ENST00000520887.1

FAM49B-218, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 2

Gene FAM49B, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-218ENST00000520887 SNW1Q13573 536 aaKnown RBP6.39□□□□□ -1.39
FAM49B-218ENST00000520887 SMC1AQ14683 1233 aaKnown RBP6.39□□□□□ -1.39
FAM49B-218ENST00000520887 GPNMBQ14956 572 aa6.39□□□□□ -1.39
FAM49B-218ENST00000520887 SNRNP35Q16560 246 aaKnown RBP6.39□□□□□ -1.39
FAM49B-218ENST00000520887 NKPD1Q17RQ9 610 aa6.39□□□□□ -1.39
FAM49B-218ENST00000520887 SV2CQ496J9 727 aa6.39□□□□□ -1.39
FAM49B-218ENST00000520887 EPC2Q52LR7 807 aa6.39□□□□□ -1.39
FAM49B-218ENST00000520887 COBLL1Q53SF7 1204 aa6.39□□□□□ -1.39
FAM49B-218ENST00000520887 CT47A1Q5JQC4 288 aaPredicted RBP6.39□□□□□ -1.39
FAM49B-218ENST00000520887 GLRA4Q5JXX5 417 aa6.39□□□□□ -1.39
FAM49B-218ENST00000520887 CLLU1OSQ5K130 101 aa6.39□□□□□ -1.39
FAM49B-218ENST00000520887 UBXN11Q5T124 520 aa6.39□□□□□ -1.39
FAM49B-218ENST00000520887 TCERG1LQ5VWI1 586 aa6.39□□□□□ -1.39
FAM49B-218ENST00000520887 EEF1DP3Q658K8 133 aa6.39□□□□□ -1.39
FAM49B-218ENST00000520887 SLC23A3Q6PIS1 610 aa6.39□□□□□ -1.39
FAM49B-218ENST00000520887 LRFN4Q6PJG9 635 aa6.39□□□□□ -1.39
FAM49B-218ENST00000520887 DSTYKQ6XUX3 929 aa6.39□□□□□ -1.39
FAM49B-218ENST00000520887 AGMOQ6ZNB7 445 aa6.39□□□□□ -1.39
FAM49B-218ENST00000520887 ARMCX6Q7L4S7 300 aa6.39□□□□□ -1.39
FAM49B-218ENST00000520887 HDXQ7Z353 690 aa6.39□□□□□ -1.39
FAM49B-218ENST00000520887 CREBRFQ8IUR6 639 aa6.39□□□□□ -1.39
FAM49B-218ENST00000520887 BRSK2Q8IWQ3 736 aa6.39□□□□□ -1.39
FAM49B-218ENST00000520887 SPACA3Q8IXA5 215 aa6.39□□□□□ -1.39
FAM49B-218ENST00000520887 C12orf56Q8IXR9 622 aa6.39□□□□□ -1.39
FAM49B-218ENST00000520887 DEFB123Q8N688 67 aa6.39□□□□□ -1.39
FAM49B-218ENST00000520887 APPL2Q8NEU8 664 aa6.39□□□□□ -1.39
FAM49B-218ENST00000520887 ZNF689Q96CS4 500 aaPredicted RBP6.39□□□□□ -1.39
FAM49B-218ENST00000520887 SAAL1Q96ER3 474 aa6.39□□□□□ -1.39
FAM49B-218ENST00000520887 CASD1Q96PB1 797 aa6.39□□□□□ -1.39
FAM49B-218ENST00000520887 PCIF1Q9H4Z3 704 aa6.39□□□□□ -1.39
FAM49B-218ENST00000520887 NGRNQ9NPE2 291 aaKnown RBP6.39□□□□□ -1.39
FAM49B-218ENST00000520887 TLR9Q9NR96 1032 aa6.39□□□□□ -1.39
FAM49B-218ENST00000520887 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.39□□□□□ -1.39
FAM49B-218ENST00000520887 LMBRD1Q9NUN5 540 aa6.39□□□□□ -1.39
FAM49B-218ENST00000520887 LMCD1Q9NZU5 365 aa6.39□□□□□ -1.39
FAM49B-218ENST00000520887 MAN1B1Q9UKM7 699 aa6.39□□□□□ -1.39
FAM49B-218ENST00000520887 CTNND2Q9UQB3 1225 aa6.39□□□□□ -1.39
FAM49B-218ENST00000520887 TRAF3IP3Q9Y228 551 aa6.39□□□□□ -1.39
FAM49B-218ENST00000520887 LZTS1Q9Y250 596 aa6.39□□□□□ -1.39
FAM49B-218ENST00000520887 PRG3Q9Y2Y8 225 aaPredicted RBP6.39□□□□□ -1.39
FAM49B-218ENST00000520887 MRPL42Q9Y6G3 142 aaKnown RBP6.39□□□□□ -1.39
FAM49B-218ENST00000520887 GBF1Q92538 1859 aa6.39□□□□□ -1.39
FAM49B-218ENST00000520887 PRAMEF27A3QJZ7 478 aa6.38□□□□□ -1.39
FAM49B-218ENST00000520887 GOLGA8IPA6NC78 632 aa6.38□□□□□ -1.39
FAM49B-218ENST00000520887 CASTOR2A6NHX0 329 aa6.38□□□□□ -1.39
FAM49B-218ENST00000520887 GOLGA8JA6NMD2 632 aa6.38□□□□□ -1.39
FAM49B-218ENST00000520887 BECN2A8MW95 431 aa6.38□□□□□ -1.39
FAM49B-218ENST00000520887 C5orf67F2Z3F1 127 aa6.38□□□□□ -1.39
FAM49B-218ENST00000520887 H7C4K7 107 aa6.38□□□□□ -1.39
FAM49B-218ENST00000520887 PES1O00541 588 aaKnown RBP6.38□□□□□ -1.39
FAM49B-218ENST00000520887 PODXLO00592 558 aa6.38□□□□□ -1.39
FAM49B-218ENST00000520887 CLIC2O15247 247 aa6.38□□□□□ -1.39
FAM49B-218ENST00000520887 MAPK13O15264 365 aa6.38□□□□□ -1.39
FAM49B-218ENST00000520887 INPPL1O15357 1258 aa6.38□□□□□ -1.39
FAM49B-218ENST00000520887 SLC16A3O15427 465 aaKnown RBP6.38□□□□□ -1.39
FAM49B-218ENST00000520887 KLRC4O43908 158 aa6.38□□□□□ -1.39
FAM49B-218ENST00000520887 FGF18O76093 207 aa6.38□□□□□ -1.39
FAM49B-218ENST00000520887 B3GAT3O94766 335 aa6.38□□□□□ -1.39
FAM49B-218ENST00000520887 C8AP07357 584 aa6.38□□□□□ -1.39
FAM49B-218ENST00000520887 ODC1P11926 461 aa6.38□□□□□ -1.39
FAM49B-218ENST00000520887 KCNE1P15382 129 aa6.38□□□□□ -1.39
FAM49B-218ENST00000520887 CCNE1P24864 410 aa6.38□□□□□ -1.39
FAM49B-218ENST00000520887 GLUD2P49448 558 aa6.38□□□□□ -1.39
FAM49B-218ENST00000520887 ACOT2P49753 483 aa6.38□□□□□ -1.39
FAM49B-218ENST00000520887 LIG3P49916 1009 aa6.38□□□□□ -1.39
FAM49B-218ENST00000520887 CASP5P51878 434 aa6.38□□□□□ -1.39
FAM49B-218ENST00000520887 BCAR1P56945 870 aa6.38□□□□□ -1.39
FAM49B-218ENST00000520887 TNNC1P63316 161 aa6.38□□□□□ -1.39
FAM49B-218ENST00000520887 TAP1Q03518 808 aa6.38□□□□□ -1.39
FAM49B-218ENST00000520887 STK4Q13043 487 aa6.38□□□□□ -1.39
FAM49B-218ENST00000520887 ADAM9Q13443 819 aa6.38□□□□□ -1.39
FAM49B-218ENST00000520887 NFIL3Q16649 462 aa6.38□□□□□ -1.39
FAM49B-218ENST00000520887 KLHL40Q2TBA0 621 aa6.38□□□□□ -1.39
FAM49B-218ENST00000520887 USP41Q3LFD5 358 aa6.38□□□□□ -1.39
FAM49B-218ENST00000520887 DCAF17Q5H9S7 520 aaPredicted RBP6.38□□□□□ -1.39
FAM49B-218ENST00000520887 CAVIN1Q6NZI2 390 aaKnown RBP6.38□□□□□ -1.39
FAM49B-218ENST00000520887 DCLRE1AQ6PJP8 1040 aa6.38□□□□□ -1.39
FAM49B-218ENST00000520887 EP400NLQ6ZTU2 488 aa6.38□□□□□ -1.39
FAM49B-218ENST00000520887 EPM2AIP1Q7L775 607 aaPredicted RBP6.38□□□□□ -1.39
FAM49B-218ENST00000520887 TMCO2Q7Z6W1 182 aaPredicted RBP6.38□□□□□ -1.39
FAM49B-218ENST00000520887 RTN4RL1Q86UN2 441 aaPredicted RBP6.38□□□□□ -1.39
FAM49B-218ENST00000520887 PPFIBP1Q86W92 1011 aa6.38□□□□□ -1.39
FAM49B-218ENST00000520887 WDR49Q8IV35 697 aa6.38□□□□□ -1.39
FAM49B-218ENST00000520887 FAM186BQ8IYM0 893 aa6.38□□□□□ -1.39
FAM49B-218ENST00000520887 CSGALNACT2Q8N6G5 542 aa6.38□□□□□ -1.39
FAM49B-218ENST00000520887 KIAA0895Q8NCT3 520 aa6.38□□□□□ -1.39
FAM49B-218ENST00000520887 LRRC15Q8TF66 581 aa6.38□□□□□ -1.39
FAM49B-218ENST00000520887 SCFD1Q8WVM8 642 aa6.38□□□□□ -1.39
FAM49B-218ENST00000520887 NELFBQ8WX92 580 aa6.38□□□□□ -1.39
FAM49B-218ENST00000520887 FAM168AQ92567 244 aa6.38□□□□□ -1.39
FAM49B-218ENST00000520887 PLPPR2Q96GM1 343 aa6.38□□□□□ -1.39
FAM49B-218ENST00000520887 ZBTB45Q96K62 511 aaPredicted RBP6.38□□□□□ -1.39
FAM49B-218ENST00000520887 FIZ1Q96SL8 496 aa6.38□□□□□ -1.39
FAM49B-218ENST00000520887 CBWD1Q9BRT8 395 aa6.38□□□□□ -1.39
FAM49B-218ENST00000520887 MRPL17Q9NRX2 175 aaKnown RBP6.38□□□□□ -1.39
FAM49B-218ENST00000520887 GGT7Q9UJ14 662 aa6.38□□□□□ -1.39
FAM49B-218ENST00000520887 CPSF3Q9UKF6 684 aaKnown RBP6.38□□□□□ -1.39
FAM49B-218ENST00000520887 ADAM28Q9UKQ2 775 aa6.38□□□□□ -1.39
FAM49B-218ENST00000520887 ITGA11Q9UKX5 1188 aa6.38□□□□□ -1.39
FAM49B-218ENST00000520887 DSEQ9UL01 958 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms