RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 ITGAVP06756 1048 aa13.36□□□□□ -0.27
TRAPPC9-208ENST00000520857 KRT7P08729 469 aa13.36□□□□□ -0.27
TRAPPC9-208ENST00000520857 CDH6P55285 790 aa13.36□□□□□ -0.27
TRAPPC9-208ENST00000520857 SNRPFP62306 86 aaKnown RBP13.36□□□□□ -0.27
TRAPPC9-208ENST00000520857 TTC39BQ5VTQ0 682 aaPredicted RBP13.36□□□□□ -0.27
TRAPPC9-208ENST00000520857 DENND5BQ6ZUT9 1274 aa13.36□□□□□ -0.27
TRAPPC9-208ENST00000520857 NET1Q7Z628 596 aaPredicted RBP13.36□□□□□ -0.27
TRAPPC9-208ENST00000520857 CCDC33Q8N5R6 958 aa13.36□□□□□ -0.27
TRAPPC9-208ENST00000520857 GDPD5Q8WTR4 605 aa13.36□□□□□ -0.27
TRAPPC9-208ENST00000520857 GATA6Q92908 595 aa13.36□□□□□ -0.27
TRAPPC9-208ENST00000520857 DTNBP1Q96EV8 351 aa13.36□□□□□ -0.27
TRAPPC9-208ENST00000520857 GCNAQ96QF7 691 aa13.36□□□□□ -0.27
TRAPPC9-208ENST00000520857 AGO4Q9HCK5 861 aaKnown RBP13.36□□□□□ -0.27
TRAPPC9-208ENST00000520857 SOX13Q9UN79 622 aa13.36□□□□□ -0.27
TRAPPC9-208ENST00000520857 DCAF8L1A6NGE4 600 aa13.36□□□□□ -0.27
TRAPPC9-208ENST00000520857 ZMPSTE24O75844 475 aa13.36□□□□□ -0.27
TRAPPC9-208ENST00000520857 TM7SF2O76062 418 aa13.36□□□□□ -0.27
TRAPPC9-208ENST00000520857 PROCP04070 461 aa13.36□□□□□ -0.27
TRAPPC9-208ENST00000520857 CYP1A1P04798 512 aaPredicted RBP13.36□□□□□ -0.27
TRAPPC9-208ENST00000520857 PDE1BQ01064 536 aa13.36□□□□□ -0.27
TRAPPC9-208ENST00000520857 KRT72Q14CN4 511 aa13.36□□□□□ -0.27
TRAPPC9-208ENST00000520857 CMPK2Q5EBM0 449 aa13.36□□□□□ -0.27
TRAPPC9-208ENST00000520857 SLC26A11Q86WA9 606 aa13.36□□□□□ -0.27
TRAPPC9-208ENST00000520857 DEPDC1BQ8WUY9 529 aa13.36□□□□□ -0.27
TRAPPC9-208ENST00000520857 DCAKDQ8WVC6 231 aa13.36□□□□□ -0.27
TRAPPC9-208ENST00000520857 ZNF516Q92618 1163 aa13.36□□□□□ -0.27
TRAPPC9-208ENST00000520857 PPP1R36Q96LQ0 422 aa13.36□□□□□ -0.27
TRAPPC9-208ENST00000520857 NUB1Q9Y5A7 615 aa13.36□□□□□ -0.27
TRAPPC9-208ENST00000520857 SMCHD1A6NHR9 2005 aa13.36□□□□□ -0.27
TRAPPC9-208ENST00000520857 KDM4FA0A1W2PPD8 638 aa13.35□□□□□ -0.27
TRAPPC9-208ENST00000520857 KCNN4O15554 427 aa13.35□□□□□ -0.27
TRAPPC9-208ENST00000520857 ADCY3O60266 1144 aa13.35□□□□□ -0.27
TRAPPC9-208ENST00000520857 PRKD1Q15139 912 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC9-208ENST00000520857 NPNTQ6UXI9 565 aa13.35□□□□□ -0.27
TRAPPC9-208ENST00000520857 ATP6V0A1Q93050 837 aa13.35□□□□□ -0.27
TRAPPC9-208ENST00000520857 MFSD14AQ96MC6 490 aa13.35□□□□□ -0.27
TRAPPC9-208ENST00000520857 CYLDQ9NQC7 956 aa13.35□□□□□ -0.27
TRAPPC9-208ENST00000520857 KCNK4Q9NYG8 393 aa13.35□□□□□ -0.27
TRAPPC9-208ENST00000520857 TMEM191CA6NGB0 347 aa13.35□□□□□ -0.27
TRAPPC9-208ENST00000520857 EXTL3O43909 919 aa13.35□□□□□ -0.27
TRAPPC9-208ENST00000520857 RNASEH1O60930 286 aaKnown RBP13.35□□□□□ -0.27
TRAPPC9-208ENST00000520857 ZC3H11AO75152 810 aaKnown RBP eCLIP13.35□□□□□ -0.274e-6■■■■□ 23.4
TRAPPC9-208ENST00000520857 ZBED1O96006 694 aa13.35□□□□□ -0.27
TRAPPC9-208ENST00000520857 CD48P09326 243 aa13.35□□□□□ -0.27
TRAPPC9-208ENST00000520857 TMEM191BP0C7N4 346 aa13.35□□□□□ -0.27
TRAPPC9-208ENST00000520857 TBXAS1P24557 533 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC9-208ENST00000520857 RFC1P35251 1148 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC9-208ENST00000520857 CDKN2BP42772 138 aa13.35□□□□□ -0.27
TRAPPC9-208ENST00000520857 CDK7P50613 346 aa13.35□□□□□ -0.27
TRAPPC9-208ENST00000520857 NCKAP1LP55160 1127 aa13.35□□□□□ -0.27
TRAPPC9-208ENST00000520857 RPL10AP62906 217 aaKnown RBP13.35□□□□□ -0.27
TRAPPC9-208ENST00000520857 C16orf46Q6P387 395 aa13.35□□□□□ -0.27
TRAPPC9-208ENST00000520857 DNAJC1Q96KC8 554 aaKnown RBP13.35□□□□□ -0.27
TRAPPC9-208ENST00000520857 EBF4Q9BQW3 602 aa13.35□□□□□ -0.27
TRAPPC9-208ENST00000520857 DNAJC16Q9Y2G8 782 aa13.35□□□□□ -0.27
TRAPPC9-208ENST00000520857 SNCAIPQ9Y6H5 919 aa13.35□□□□□ -0.27
TRAPPC9-208ENST00000520857 SPATA31A6Q5VVP1 1343 aa13.35□□□□□ -0.27
TRAPPC9-208ENST00000520857 JAK3P52333 1124 aa13.35□□□□□ -0.27
TRAPPC9-208ENST00000520857 OASLQ15646 514 aaKnown RBP13.35□□□□□ -0.27
TRAPPC9-208ENST00000520857 CDHR3Q6ZTQ4 885 aa13.35□□□□□ -0.27
TRAPPC9-208ENST00000520857 POLNQ7Z5Q5 900 aa13.35□□□□□ -0.27
TRAPPC9-208ENST00000520857 MCF2L2Q86YR7 1114 aa13.35□□□□□ -0.27
TRAPPC9-208ENST00000520857 PRMT6Q96LA8 375 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC9-208ENST00000520857 KLHL4Q9C0H6 718 aa13.35□□□□□ -0.27
TRAPPC9-208ENST00000520857 MIS12Q9H081 205 aa13.35□□□□□ -0.27
TRAPPC9-208ENST00000520857 COL20A1Q9P218 1284 aa13.35□□□□□ -0.27
TRAPPC9-208ENST00000520857 HNRNPRO43390 633 aaKnown RBP13.34□□□□□ -0.27
TRAPPC9-208ENST00000520857 COPAP53621 1224 aa13.34□□□□□ -0.27
TRAPPC9-208ENST00000520857 PEX6Q13608 980 aa13.34□□□□□ -0.27
TRAPPC9-208ENST00000520857 ZACNQ401N2 412 aa13.34□□□□□ -0.27
TRAPPC9-208ENST00000520857 RALGPS1Q5JS13 557 aa13.34□□□□□ -0.27
TRAPPC9-208ENST00000520857 TATDN1Q6P1N9 297 aa13.34□□□□□ -0.27
TRAPPC9-208ENST00000520857 SLC39A4Q6P5W5 647 aa13.34□□□□□ -0.27
TRAPPC9-208ENST00000520857 IYDQ6PHW0 289 aa13.34□□□□□ -0.27
TRAPPC9-208ENST00000520857 DHDDSQ86SQ9 333 aa13.34□□□□□ -0.27
TRAPPC9-208ENST00000520857 SATL1Q86VE3 508 aa13.34□□□□□ -0.27
TRAPPC9-208ENST00000520857 IGDCC3Q8IVU1 814 aa13.34□□□□□ -0.27
TRAPPC9-208ENST00000520857 OR5B17Q8NGF7 314 aa13.34□□□□□ -0.27
TRAPPC9-208ENST00000520857 SNRNP27Q8WVK2 155 aaKnown RBP13.34□□□□□ -0.27
TRAPPC9-208ENST00000520857 NKD2Q969F2 451 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC9-208ENST00000520857 VCPIP1Q96JH7 1222 aa13.34□□□□□ -0.27
TRAPPC9-208ENST00000520857 ZNF668Q96K58 619 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC9-208ENST00000520857 KCNK13Q9HB14 408 aa13.34□□□□□ -0.27
TRAPPC9-208ENST00000520857 APOBEC3GQ9HC16 384 aaKnown RBP13.34□□□□□ -0.27
TRAPPC9-208ENST00000520857 PCDHA10Q9Y5I2 948 aa13.34□□□□□ -0.27
TRAPPC9-208ENST00000520857 FKBP6O75344 327 aa13.34□□□□□ -0.27
TRAPPC9-208ENST00000520857 LYPLA1O75608 230 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC9-208ENST00000520857 PEX2P28328 305 aa13.34□□□□□ -0.27
TRAPPC9-208ENST00000520857 OGDHQ02218 1023 aa13.34□□□□□ -0.27
TRAPPC9-208ENST00000520857 SPP2Q13103 211 aa13.34□□□□□ -0.27
TRAPPC9-208ENST00000520857 DPYSL3Q14195 570 aa13.34□□□□□ -0.27
TRAPPC9-208ENST00000520857 PPP6R3Q5H9R7 873 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC9-208ENST00000520857 SH2D4BQ5SQS7 431 aa13.34□□□□□ -0.27
TRAPPC9-208ENST00000520857 PODNQ7Z5L7 613 aa13.34□□□□□ -0.27
TRAPPC9-208ENST00000520857 FAM160B2Q86V87 743 aa13.34□□□□□ -0.27
TRAPPC9-208ENST00000520857 PHF13Q86YI8 300 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC9-208ENST00000520857 C4orf19Q8IY42 314 aa13.34□□□□□ -0.27
TRAPPC9-208ENST00000520857 DEFB107AQ8IZN7 70 aa13.34□□□□□ -0.27
TRAPPC9-208ENST00000520857 MIPOL1Q8TD10 442 aa13.34□□□□□ -0.27
TRAPPC9-208ENST00000520857 ATP2A3Q93084 1043 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms