RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 IPO4Q8TEX9 1081 aaKnown RBP8.98□□□□□ -0.97
VAPB-206ENST00000520497 KCTD13Q8WZ19 329 aa8.98□□□□□ -0.97
VAPB-206ENST00000520497 FUBP3Q96I24 572 aaKnown RBP eCLIP8.98□□□□□ -0.97
VAPB-206ENST00000520497 ZBED2Q9BTP6 218 aa8.98□□□□□ -0.97
VAPB-206ENST00000520497 RHOBTB2Q9BYZ6 727 aa8.98□□□□□ -0.97
VAPB-206ENST00000520497 UBXN6Q9BZV1 441 aa8.98□□□□□ -0.97
VAPB-206ENST00000520497 TRIM7Q9C029 511 aa8.98□□□□□ -0.97
VAPB-206ENST00000520497 MIS12Q9H081 205 aa8.98□□□□□ -0.97
VAPB-206ENST00000520497 MRPL47Q9HD33 250 aaKnown RBP8.98□□□□□ -0.97
VAPB-206ENST00000520497 ABCB6Q9NP58 842 aa8.98□□□□□ -0.97
VAPB-206ENST00000520497 PNPLA8Q9NP80 782 aa8.98□□□□□ -0.97
VAPB-206ENST00000520497 AAASQ9NRG9 546 aa8.98□□□□□ -0.97
VAPB-206ENST00000520497 PARVAQ9NVD7 372 aa8.98□□□□□ -0.97
VAPB-206ENST00000520497 RNF14Q9UBS8 474 aa8.98□□□□□ -0.97
VAPB-206ENST00000520497 STK39Q9UEW8 545 aa8.98□□□□□ -0.97
VAPB-206ENST00000520497 METRNQ9UJH8 293 aa8.98□□□□□ -0.97
VAPB-206ENST00000520497 BACE2Q9Y5Z0 518 aa8.98□□□□□ -0.97
VAPB-206ENST00000520497 NOTCH4Q99466 2003 aa8.98□□□□□ -0.97
VAPB-206ENST00000520497 TRANK1O15050 2925 aa8.98□□□□□ -0.97
VAPB-206ENST00000520497 CHD7Q9P2D1 2997 aa8.97□□□□□ -0.97
VAPB-206ENST00000520497 C2orf16Q68DN1 1984 aa8.97□□□□□ -0.97
VAPB-206ENST00000520497 CHD9Q3L8U1 2897 aa8.97□□□□□ -0.97
VAPB-206ENST00000520497 CTAGE15A4D2H0 777 aa8.97□□□□□ -0.97
VAPB-206ENST00000520497 LINC01553A4QN01 128 aa8.97□□□□□ -0.97
VAPB-206ENST00000520497 TMEM191CA6NGB0 347 aa8.97□□□□□ -0.97
VAPB-206ENST00000520497 SIGLEC16A6NMB1 481 aa8.97□□□□□ -0.97
VAPB-206ENST00000520497 EFCAB8A8MWE9 144 aa8.97□□□□□ -0.97
VAPB-206ENST00000520497 PAPSS1O43252 624 aaPredicted RBP8.97□□□□□ -0.97
VAPB-206ENST00000520497 FGF18O76093 207 aa8.97□□□□□ -0.97
VAPB-206ENST00000520497 VNN2O95498 520 aa8.97□□□□□ -0.97
VAPB-206ENST00000520497 CTAGE8P0CG41 777 aa8.97□□□□□ -0.97
VAPB-206ENST00000520497 BDNFP23560 247 aa8.97□□□□□ -0.97
VAPB-206ENST00000520497 TIE1P35590 1138 aa8.97□□□□□ -0.97
VAPB-206ENST00000520497 PBX2P40425 430 aa8.97□□□□□ -0.97
VAPB-206ENST00000520497 PAFAH1B1P43034 410 aa8.97□□□□□ -0.97
VAPB-206ENST00000520497 MAGEA11P43364 429 aa8.97□□□□□ -0.97
VAPB-206ENST00000520497 ACADSBP45954 432 aa8.97□□□□□ -0.97
VAPB-206ENST00000520497 GLUD2P49448 558 aa8.97□□□□□ -0.97
VAPB-206ENST00000520497 RGS7P49802 495 aa8.97□□□□□ -0.97
VAPB-206ENST00000520497 MAP3K7CLP57077 242 aa8.97□□□□□ -0.97
VAPB-206ENST00000520497 SLC8A3P57103 927 aa8.97□□□□□ -0.97
VAPB-206ENST00000520497 SNX16P57768 344 aa8.97□□□□□ -0.97
VAPB-206ENST00000520497 AMPD2Q01433 879 aa8.97□□□□□ -0.97
VAPB-206ENST00000520497 TAP1Q03518 808 aa8.97□□□□□ -0.97
VAPB-206ENST00000520497 SMARCB1Q12824 385 aa8.97□□□□□ -0.97
VAPB-206ENST00000520497 GPR17Q13304 367 aa8.97□□□□□ -0.97
VAPB-206ENST00000520497 PSMD5Q16401 504 aa8.97□□□□□ -0.97
VAPB-206ENST00000520497 NFE2Q16621 373 aaPredicted RBP8.97□□□□□ -0.97
VAPB-206ENST00000520497 PAPD7Q5XG87 772 aaKnown RBP8.97□□□□□ -0.97
VAPB-206ENST00000520497 DNAJC24Q6P3W2 148 aa8.97□□□□□ -0.97
VAPB-206ENST00000520497 PRSS55Q6UWB4 352 aaPredicted RBP8.97□□□□□ -0.97
VAPB-206ENST00000520497 FAM183BPQ6ZVS7 135 aa8.97□□□□□ -0.97
VAPB-206ENST00000520497 PEX26Q7Z412 305 aa8.97□□□□□ -0.97
VAPB-206ENST00000520497 PHLDB2Q86SQ0 1253 aa8.97□□□□□ -0.97
VAPB-206ENST00000520497 CTAGE6Q86UF2 777 aa8.97□□□□□ -0.97
VAPB-206ENST00000520497 PIGZQ86VD9 579 aa8.97□□□□□ -0.97
VAPB-206ENST00000520497 ZDHHC17Q8IUH5 632 aa8.97□□□□□ -0.97
VAPB-206ENST00000520497 CTAGE4Q8IX94 777 aa8.97□□□□□ -0.97
VAPB-206ENST00000520497 RIN2Q8WYP3 895 aaPredicted RBP8.97□□□□□ -0.97
VAPB-206ENST00000520497 UBXN4Q92575 508 aa8.97□□□□□ -0.97
VAPB-206ENST00000520497 GOLGA1Q92805 767 aa8.97□□□□□ -0.97
VAPB-206ENST00000520497 KHSRPQ92945 711 aaKnown RBP eCLIP8.97□□□□□ -0.97
VAPB-206ENST00000520497 PIWIL1Q96J94 861 aaKnown RBP8.97□□□□□ -0.97
VAPB-206ENST00000520497 RNPC3Q96LT9 517 aaKnown RBP8.97□□□□□ -0.97
VAPB-206ENST00000520497 MED10Q9BTT4 135 aa8.97□□□□□ -0.97
VAPB-206ENST00000520497 SELENOOQ9BVL4 669 aa8.97□□□□□ -0.97
VAPB-206ENST00000520497 TLR10Q9BXR5 811 aa8.97□□□□□ -0.97
VAPB-206ENST00000520497 COL25A1Q9BXS0 654 aaPredicted RBP8.97□□□□□ -0.97
VAPB-206ENST00000520497 GOLPH3Q9H4A6 298 aa8.97□□□□□ -0.97
VAPB-206ENST00000520497 SYNCQ9H7C4 482 aa8.97□□□□□ -0.97
VAPB-206ENST00000520497 DMAP1Q9NPF5 467 aaPredicted RBP8.97□□□□□ -0.97
VAPB-206ENST00000520497 ST7Q9NRC1 585 aa8.97□□□□□ -0.97
VAPB-206ENST00000520497 ANAPC7Q9UJX3 599 aa8.97□□□□□ -0.97
VAPB-206ENST00000520497 AMFRQ9UKV5 643 aa8.97□□□□□ -0.97
VAPB-206ENST00000520497 RWDD3Q9Y3V2 267 aa8.97□□□□□ -0.97
VAPB-206ENST00000520497 PCDHB12Q9Y5F1 795 aa8.97□□□□□ -0.97
VAPB-206ENST00000520497 NUP205Q92621 2012 aa8.97□□□□□ -0.97
VAPB-206ENST00000520497 WDR27A2RRH5 827 aa8.96□□□□□ -0.98
VAPB-206ENST00000520497 MTMR11A4FU01 709 aa8.96□□□□□ -0.98
VAPB-206ENST00000520497 C5orf67F2Z3F1 127 aa8.96□□□□□ -0.98
VAPB-206ENST00000520497 CES2O00748 559 aa8.96□□□□□ -0.98
VAPB-206ENST00000520497 ADAM12O43184 909 aa8.96□□□□□ -0.98
VAPB-206ENST00000520497 LILRB3O75022 631 aa8.96□□□□□ -0.98
VAPB-206ENST00000520497 GJB6O95452 261 aa8.96□□□□□ -0.98
VAPB-206ENST00000520497 FTCDO95954 541 aa8.96□□□□□ -0.98
VAPB-206ENST00000520497 ATP1A1P05023 1023 aaKnown RBP8.96□□□□□ -0.98
VAPB-206ENST00000520497 CYP2F1P24903 491 aa8.96□□□□□ -0.98
VAPB-206ENST00000520497 BMPR1AP36894 532 aa8.96□□□□□ -0.98
VAPB-206ENST00000520497 CDR1P51861 262 aa8.96□□□□□ -0.98
VAPB-206ENST00000520497 RPL7AP62424 266 aaKnown RBP8.96□□□□□ -0.98
VAPB-206ENST00000520497 SLC6A3Q01959 620 aa8.96□□□□□ -0.98
VAPB-206ENST00000520497 ROR1Q01973 937 aa8.96□□□□□ -0.98
VAPB-206ENST00000520497 ADCY1Q08828 1119 aa8.96□□□□□ -0.98
VAPB-206ENST00000520497 ZNF252P-AS1Q0IIN9 211 aa8.96□□□□□ -0.98
VAPB-206ENST00000520497 GRIN2CQ14957 1233 aa8.96□□□□□ -0.98
VAPB-206ENST00000520497 RPS6KA1Q15418 735 aa8.96□□□□□ -0.98
VAPB-206ENST00000520497 FAM102AQ5T9C2 384 aaPredicted RBP8.96□□□□□ -0.98
VAPB-206ENST00000520497 ZNF697Q5TEC3 545 aa8.96□□□□□ -0.98
VAPB-206ENST00000520497 MEI1Q5TIA1 1274 aa8.96□□□□□ -0.98
VAPB-206ENST00000520497 VSTM1Q6UX27 236 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms