RNA–Protein interactions for RNA: ENST00000520348.5

SNHG6-201, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2 BASIC

Gene SNHG6, Length 648 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-201ENST00000520348 KRIT1O00522 736 aa16.84■□□□□ 0.29
SNHG6-201ENST00000520348 DAB1O75553 588 aa16.84■□□□□ 0.29
SNHG6-201ENST00000520348 AP1G2O75843 785 aa16.84■□□□□ 0.29
SNHG6-201ENST00000520348 TNFRSF8P28908 595 aa16.84■□□□□ 0.29
SNHG6-201ENST00000520348 COPS2P61201 443 aa16.84■□□□□ 0.29
SNHG6-201ENST00000520348 TSPY1Q01534 308 aa16.84■□□□□ 0.29
SNHG6-201ENST00000520348 ELAVL2Q12926 359 aaKnown RBP16.84■□□□□ 0.29
SNHG6-201ENST00000520348 KLF1Q13351 362 aaPredicted RBP16.84■□□□□ 0.29
SNHG6-201ENST00000520348 BRD3Q15059 726 aa16.84■□□□□ 0.29
SNHG6-201ENST00000520348 LONRF2Q1L5Z9 754 aa16.84■□□□□ 0.29
SNHG6-201ENST00000520348 CCDC14Q49A88 953 aa16.84■□□□□ 0.29
SNHG6-201ENST00000520348 EFHC1Q5JVL4 640 aa16.84■□□□□ 0.29
SNHG6-201ENST00000520348 FBXO38Q6PIJ6 1188 aa16.84■□□□□ 0.29
SNHG6-201ENST00000520348 CYP4V2Q6ZWL3 525 aaPredicted RBP16.84■□□□□ 0.29
SNHG6-201ENST00000520348 BNIPLQ7Z465 357 aa16.84■□□□□ 0.29
SNHG6-201ENST00000520348 LRRTM3Q86VH5 581 aa16.84■□□□□ 0.29
SNHG6-201ENST00000520348 SCUBE3Q8IX30 993 aa16.84■□□□□ 0.29
SNHG6-201ENST00000520348 PRELID2Q8N945 189 aa16.84■□□□□ 0.29
SNHG6-201ENST00000520348 CENPIQ92674 756 aaPredicted RBP16.84■□□□□ 0.29
SNHG6-201ENST00000520348 TOP1MTQ969P6 601 aa16.84■□□□□ 0.29
SNHG6-201ENST00000520348 ZNF689Q96CS4 500 aaPredicted RBP16.84■□□□□ 0.29
SNHG6-201ENST00000520348 RBM41Q96IZ5 413 aaKnown RBP16.84■□□□□ 0.29
SNHG6-201ENST00000520348 MED10Q9BTT4 135 aa16.84■□□□□ 0.29
SNHG6-201ENST00000520348 LRRC1Q9BTT6 524 aa16.84■□□□□ 0.29
SNHG6-201ENST00000520348 DDX23Q9BUQ8 820 aaKnown RBP16.84■□□□□ 0.29
SNHG6-201ENST00000520348 PRDM10Q9NQV6 1147 aa16.84■□□□□ 0.29
SNHG6-201ENST00000520348 USTQ9Y2C2 406 aa16.84■□□□□ 0.29
SNHG6-201ENST00000520348 NR2E1Q9Y466 385 aa16.84■□□□□ 0.29
SNHG6-201ENST00000520348 SF3B1O75533 1304 aaKnown RBP eCLIP16.84■□□□□ 0.29
SNHG6-201ENST00000520348 TBC1D4O60343 1298 aa16.83■□□□□ 0.28
SNHG6-201ENST00000520348 HSF2BPO75031 334 aa16.83■□□□□ 0.28
SNHG6-201ENST00000520348 TADA2AO75478 443 aa16.83■□□□□ 0.28
SNHG6-201ENST00000520348 BAIAP3O94812 1187 aa16.83■□□□□ 0.28
SNHG6-201ENST00000520348 ALDH2P05091 517 aa16.83■□□□□ 0.28
SNHG6-201ENST00000520348 KRT7P08729 469 aa16.83■□□□□ 0.28
SNHG6-201ENST00000520348 RHOXF2BP0C7M4 288 aa16.83■□□□□ 0.28
SNHG6-201ENST00000520348 IL1R2P27930 398 aa16.83■□□□□ 0.28
SNHG6-201ENST00000520348 CACNA2D1P54289 1103 aa16.83■□□□□ 0.28
SNHG6-201ENST00000520348 RNASE9P60153 205 aaKnown RBP16.83■□□□□ 0.28
SNHG6-201ENST00000520348 MRPS5P82675 430 aaKnown RBP16.83■□□□□ 0.28
SNHG6-201ENST00000520348 ADIGQ0VDE8 80 aa16.83■□□□□ 0.28
SNHG6-201ENST00000520348 TAF5Q15542 800 aa16.83■□□□□ 0.28
SNHG6-201ENST00000520348 VARS2Q5ST30 1063 aaKnown RBP16.83■□□□□ 0.28
SNHG6-201ENST00000520348 CCDC70Q6NSX1 233 aa16.83■□□□□ 0.28
SNHG6-201ENST00000520348 C8orf74Q6P047 294 aa16.83■□□□□ 0.28
SNHG6-201ENST00000520348 FUT10Q6P4F1 479 aa16.83■□□□□ 0.28
SNHG6-201ENST00000520348 C4orf50Q6ZRC1 276 aa16.83■□□□□ 0.28
SNHG6-201ENST00000520348 RCOR2Q8IZ40 523 aa16.83■□□□□ 0.28
SNHG6-201ENST00000520348 HNRNPLLQ8WVV9 542 aaKnown RBP16.83■□□□□ 0.28
SNHG6-201ENST00000520348 MAIP1Q8WWC4 291 aa16.83■□□□□ 0.28
SNHG6-201ENST00000520348 FUBP3Q96I24 572 aaKnown RBP eCLIP16.83■□□□□ 0.28
SNHG6-201ENST00000520348 SLC2A13Q96QE2 648 aa16.83■□□□□ 0.28
SNHG6-201ENST00000520348 TMEM209Q96SK2 561 aa16.83■□□□□ 0.28
SNHG6-201ENST00000520348 RHOXF2Q9BQY4 288 aa16.83■□□□□ 0.28
SNHG6-201ENST00000520348 HERPUD2Q9BSE4 406 aa16.83■□□□□ 0.28
SNHG6-201ENST00000520348 OXCT2Q9BYC2 517 aaPredicted RBP16.83■□□□□ 0.28
SNHG6-201ENST00000520348 CWH43Q9H720 699 aa16.83■□□□□ 0.28
SNHG6-201ENST00000520348 DMAP1Q9NPF5 467 aaPredicted RBP16.83■□□□□ 0.28
SNHG6-201ENST00000520348 CNGB3Q9NQW8 809 aa16.83■□□□□ 0.28
SNHG6-201ENST00000520348 HCSTQ9UBK5 93 aa16.83■□□□□ 0.28
SNHG6-201ENST00000520348 EFR3BQ9Y2G0 817 aa16.83■□□□□ 0.28
SNHG6-201ENST00000520348 FAN1Q9Y2M0 1017 aa16.83■□□□□ 0.28
SNHG6-201ENST00000520348 KIAA0100Q14667 2235 aaKnown RBP16.82■□□□□ 0.28
SNHG6-201ENST00000520348 GOLGA6L10A0A0M3HER8 536 aa16.82■□□□□ 0.28
SNHG6-201ENST00000520348 OR6C75A6NL08 312 aa16.82■□□□□ 0.28
SNHG6-201ENST00000520348 C3orf70A6NLC5 250 aaPredicted RBP16.82■□□□□ 0.28
SNHG6-201ENST00000520348 PIK3R2O00459 728 aa16.82■□□□□ 0.28
SNHG6-201ENST00000520348 SART1O43290 800 aaKnown RBP16.82■□□□□ 0.28
SNHG6-201ENST00000520348 PHF2O75151 1096 aa16.82■□□□□ 0.28
SNHG6-201ENST00000520348 ENDOD1O94919 500 aa16.82■□□□□ 0.28
SNHG6-201ENST00000520348 ZRANB2O95218 330 aaKnown RBP eCLIP16.82■□□□□ 0.28
SNHG6-201ENST00000520348 PDGFRAP16234 1089 aa16.82■□□□□ 0.28
SNHG6-201ENST00000520348 MCM3P25205 808 aa16.82■□□□□ 0.28
SNHG6-201ENST00000520348 MIPP30301 263 aa16.82■□□□□ 0.28
SNHG6-201ENST00000520348 MAP3K7CLP57077 242 aa16.82■□□□□ 0.28
SNHG6-201ENST00000520348 DAOAP59103 153 aa16.82■□□□□ 0.28
SNHG6-201ENST00000520348 HADHQ16836 314 aaKnown RBP16.82■□□□□ 0.28
SNHG6-201ENST00000520348 TXNRD3NBQ6F5E7 133 aa16.82■□□□□ 0.28
SNHG6-201ENST00000520348 BHLHA9Q7RTU4 235 aa16.82■□□□□ 0.28
SNHG6-201ENST00000520348 CMASQ8NFW8 434 aaPredicted RBP16.82■□□□□ 0.28
SNHG6-201ENST00000520348 CLEC4CQ8WTT0 213 aa16.82■□□□□ 0.28
SNHG6-201ENST00000520348 BCL7CQ8WUZ0 217 aaPredicted RBP16.82■□□□□ 0.28
SNHG6-201ENST00000520348 IRGQQ8WZA9 623 aa16.82■□□□□ 0.28
SNHG6-201ENST00000520348 NT5C3BQ969T7 300 aa16.82■□□□□ 0.28
SNHG6-201ENST00000520348 SLITRK1Q96PX8 696 aa16.82■□□□□ 0.28
SNHG6-201ENST00000520348 KRT12Q99456 494 aa16.82■□□□□ 0.28
SNHG6-201ENST00000520348 AP1M1Q9BXS5 423 aa16.82■□□□□ 0.28
SNHG6-201ENST00000520348 GPR62Q9BZJ7 368 aa16.82■□□□□ 0.28
SNHG6-201ENST00000520348 LRRC4Q9HBW1 653 aa16.82■□□□□ 0.28
SNHG6-201ENST00000520348 ALPK3Q96L96 1907 aa16.81■□□□□ 0.28
SNHG6-201ENST00000520348 TCRBV7S2A1N4TA0A589 114 aa16.81■□□□□ 0.28
SNHG6-201ENST00000520348 RAD51CO43502 376 aa16.81■□□□□ 0.28
SNHG6-201ENST00000520348 RNF8O76064 485 aa16.81■□□□□ 0.28
SNHG6-201ENST00000520348 TRUB2O95900 331 aaKnown RBP16.81■□□□□ 0.28
SNHG6-201ENST00000520348 AMHP03971 560 aa16.81■□□□□ 0.28
SNHG6-201ENST00000520348 LCP1P13796 627 aa16.81■□□□□ 0.28
SNHG6-201ENST00000520348 CSF2RAP15509 400 aa16.81■□□□□ 0.28
SNHG6-201ENST00000520348 SDC4P31431 198 aa16.81■□□□□ 0.28
SNHG6-201ENST00000520348 CHRNA3P32297 505 aa16.81■□□□□ 0.28
SNHG6-201ENST00000520348 ARSEP51690 589 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms