RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 CCDC13Q8IYE1 715 aa26.94■■□□□ 1.9
COL13A1-213ENST00000520267 BEST2Q8NFU1 509 aa26.94■■□□□ 1.9
COL13A1-213ENST00000520267 DYDC1Q8WWB3 177 aa26.94■■□□□ 1.9
COL13A1-213ENST00000520267 APOL6Q9BWW8 343 aa26.94■■□□□ 1.9
COL13A1-213ENST00000520267 MIS12Q9H081 205 aa26.94■■□□□ 1.9
COL13A1-213ENST00000520267 NDC80O14777 642 aa26.93■■□□□ 1.9
COL13A1-213ENST00000520267 OLFML1Q6UWY5 402 aa26.93■■□□□ 1.9
COL13A1-213ENST00000520267 ALKAL1Q6UXT8 129 aa26.93■■□□□ 1.9
COL13A1-213ENST00000520267 PPIL6Q8IXY8 311 aa26.93■■□□□ 1.9
COL13A1-213ENST00000520267 MAML1Q92585 1016 aa26.93■■□□□ 1.9
COL13A1-213ENST00000520267 OSBPL7Q9BZF2 842 aa26.93■■□□□ 1.9
COL13A1-213ENST00000520267 VPS37BQ9H9H4 285 aa26.93■■□□□ 1.9
COL13A1-213ENST00000520267 CPA4Q9UI42 421 aa26.93■■□□□ 1.9
COL13A1-213ENST00000520267 SMIM35A0A1B0GVV1 85 aa26.93■■□□□ 1.9
COL13A1-213ENST00000520267 GABBR2O75899 941 aa26.93■■□□□ 1.9
COL13A1-213ENST00000520267 AKAP5P24588 427 aa26.93■■□□□ 1.9
COL13A1-213ENST00000520267 FKBP1BP68106 108 aa26.93■■□□□ 1.9
COL13A1-213ENST00000520267 ATP11AP98196 1134 aa26.93■■□□□ 1.9
COL13A1-213ENST00000520267 CCDC121Q6ZUS5 278 aa26.93■■□□□ 1.9
COL13A1-213ENST00000520267 NAT8LQ8N9F0 302 aa26.93■■□□□ 1.9
COL13A1-213ENST00000520267 FAM71DQ8N9W8 422 aa26.93■■□□□ 1.9
COL13A1-213ENST00000520267 SLC4A5Q9BY07 1137 aa26.93■■□□□ 1.9
COL13A1-213ENST00000520267 PDCD11Q14690 1871 aaKnown RBP26.93■■□□□ 1.9
COL13A1-213ENST00000520267 MBLAC1A4D2B0 266 aaPredicted RBP26.92■■□□□ 1.9
COL13A1-213ENST00000520267 HCRTO43612 131 aa26.92■■□□□ 1.9
COL13A1-213ENST00000520267 RECQL4O94761 1208 aa26.92■■□□□ 1.9
COL13A1-213ENST00000520267 RBP3P10745 1247 aa26.92■■□□□ 1.9
COL13A1-213ENST00000520267 ADCY1Q08828 1119 aa26.92■■□□□ 1.9
COL13A1-213ENST00000520267 DPYSL3Q14195 570 aa26.92■■□□□ 1.9
COL13A1-213ENST00000520267 C9orf57Q5W0N0 161 aa26.92■■□□□ 1.9
COL13A1-213ENST00000520267 ANKMY2Q8IV38 441 aa26.92■■□□□ 1.9
COL13A1-213ENST00000520267 RIBC1Q8N443 379 aaPredicted RBP26.92■■□□□ 1.9
COL13A1-213ENST00000520267 LRRC52Q8N7C0 313 aa26.92■■□□□ 1.9
COL13A1-213ENST00000520267 SPATA18Q8TC71 538 aa26.92■■□□□ 1.9
COL13A1-213ENST00000520267 DNAJB3Q8WWF6 145 aa26.92■■□□□ 1.9
COL13A1-213ENST00000520267 KHSRPQ92945 711 aaKnown RBP eCLIP26.92■■□□□ 1.9
COL13A1-213ENST00000520267 DPEP3Q9H4B8 488 aa26.92■■□□□ 1.9
COL13A1-213ENST00000520267 FLRT1Q9NZU1 646 aa26.92■■□□□ 1.9
COL13A1-213ENST00000520267 CNTN3Q9P232 1028 aa26.92■■□□□ 1.9
COL13A1-213ENST00000520267 TRIP12Q14669 1992 aaPredicted RBP26.92■■□□□ 1.9
COL13A1-213ENST00000520267 ZNF236Q9UL36 1845 aa26.92■■□□□ 1.9
COL13A1-213ENST00000520267 POC1B-GALNT4F8VUJ3 575 aa26.92■■□□□ 1.9
COL13A1-213ENST00000520267 PRPSAP2O60256 369 aa26.92■■□□□ 1.9
COL13A1-213ENST00000520267 NRLP54845 237 aa26.92■■□□□ 1.9
COL13A1-213ENST00000520267 CDC42EP1Q00587 391 aa26.92■■□□□ 1.9
COL13A1-213ENST00000520267 GPR162Q16538 588 aa26.92■■□□□ 1.9
COL13A1-213ENST00000520267 HIF1AQ16665 826 aa26.92■■□□□ 1.9
COL13A1-213ENST00000520267 SOWAHAQ2M3V2 549 aa26.92■■□□□ 1.9
COL13A1-213ENST00000520267 FNBP1LQ5T0N5 605 aa26.92■■□□□ 1.9
COL13A1-213ENST00000520267 CCDC197Q8NCU1 140 aa26.92■■□□□ 1.9
COL13A1-213ENST00000520267 OR6B3Q8NGW1 331 aa26.92■■□□□ 1.9
COL13A1-213ENST00000520267 SLC35F5Q8WV83 523 aa26.92■■□□□ 1.9
COL13A1-213ENST00000520267 MAK16Q9BXY0 300 aaKnown RBP26.92■■□□□ 1.9
COL13A1-213ENST00000520267 TCRBV7S3A2A0A539 114 aa26.91■■□□□ 1.9
COL13A1-213ENST00000520267 MCF2LO15068 1137 aa26.91■■□□□ 1.9
COL13A1-213ENST00000520267 FSBPO95073 299 aa26.91■■□□□ 1.9
COL13A1-213ENST00000520267 OLFML2BQ68BL8 750 aa26.91■■□□□ 1.9
COL13A1-213ENST00000520267 TAX1BP1Q86VP1 789 aa26.91■■□□□ 1.9
COL13A1-213ENST00000520267 PACS2Q86VP3 889 aa26.91■■□□□ 1.9
COL13A1-213ENST00000520267 SCUBE3Q8IX30 993 aa26.91■■□□□ 1.9
COL13A1-213ENST00000520267 TMEM40Q8WWA1 233 aa26.91■■□□□ 1.9
COL13A1-213ENST00000520267 ELAC2Q9BQ52 826 aaKnown RBP26.91■■□□□ 1.9
COL13A1-213ENST00000520267 TRIM6Q9C030 488 aaPredicted RBP26.91■■□□□ 1.9
COL13A1-213ENST00000520267 SLC6A3Q01959 620 aa26.91■■□□□ 1.9
COL13A1-213ENST00000520267 MFSD10Q14728 455 aa26.91■■□□□ 1.9
COL13A1-213ENST00000520267 SPRED3Q2MJR0 410 aa26.91■■□□□ 1.9
COL13A1-213ENST00000520267 MSS51Q4VC12 460 aa26.91■■□□□ 1.9
COL13A1-213ENST00000520267 SCYL2Q6P3W7 929 aa26.91■■□□□ 1.9
COL13A1-213ENST00000520267 TMEM110Q86TL2 294 aa26.91■■□□□ 1.9
COL13A1-213ENST00000520267 C2orf69Q8N8R5 385 aa26.91■■□□□ 1.9
COL13A1-213ENST00000520267 GPATCH2LQ9NWQ4 482 aa26.91■■□□□ 1.9
COL13A1-213ENST00000520267 SLC5A4Q9NY91 659 aa26.91■■□□□ 1.9
COL13A1-213ENST00000520267 CAPN7Q9Y6W3 813 aa26.91■■□□□ 1.9
COL13A1-213ENST00000520267 RASA4BC9J798 803 aa26.9■■□□□ 1.9
COL13A1-213ENST00000520267 DPYSL4O14531 572 aa26.9■■□□□ 1.9
COL13A1-213ENST00000520267 RASA4O43374 803 aa26.9■■□□□ 1.9
COL13A1-213ENST00000520267 CELF2O95319 508 aaKnown RBP26.9■■□□□ 1.9
COL13A1-213ENST00000520267 GPX6P59796 221 aa26.9■■□□□ 1.9
COL13A1-213ENST00000520267 NOMO1Q15155 1222 aa26.9■■□□□ 1.9
COL13A1-213ENST00000520267 TLK2Q86UE8 772 aa26.9■■□□□ 1.9
COL13A1-213ENST00000520267 GDAP1Q8TB36 358 aa26.9■■□□□ 1.9
COL13A1-213ENST00000520267 B3GNT5Q9BYG0 378 aa26.9■■□□□ 1.9
COL13A1-213ENST00000520267 NGRNQ9NPE2 291 aaKnown RBP26.9■■□□□ 1.9
COL13A1-213ENST00000520267 KLK14Q9P0G3 267 aa26.9■■□□□ 1.9
COL13A1-213ENST00000520267 ACTL7BQ9Y614 415 aa26.9■■□□□ 1.9
COL13A1-213ENST00000520267 PAPSS1O43252 624 aaPredicted RBP26.9■■□□□ 1.9
COL13A1-213ENST00000520267 ZNF200P98182 395 aaPredicted RBP26.9■■□□□ 1.9
COL13A1-213ENST00000520267 MORN1Q5T089 497 aa26.9■■□□□ 1.9
COL13A1-213ENST00000520267 ZC3H18Q86VM9 953 aaKnown RBP26.9■■□□□ 1.9
COL13A1-213ENST00000520267 TDRPQ86YL5 185 aa26.9■■□□□ 1.9
COL13A1-213ENST00000520267 HESX1Q9UBX0 185 aa26.9■■□□□ 1.9
COL13A1-213ENST00000520267 PCNTO95613 3336 aa26.89■■□□□ 1.9
COL13A1-213ENST00000520267 A8MXQ7 604 aa26.89■■□□□ 1.9
COL13A1-213ENST00000520267 TCP11X1B4DZS4 312 aa26.89■■□□□ 1.9
COL13A1-213ENST00000520267 TMEM63AO94886 807 aa26.89■■□□□ 1.9
COL13A1-213ENST00000520267 SETSIPP0DME0 302 aa26.89■■□□□ 1.9
COL13A1-213ENST00000520267 ZC3H12AQ5D1E8 599 aaKnown RBP26.89■■□□□ 1.9
COL13A1-213ENST00000520267 FAM172AQ8WUF8 416 aa26.89■■□□□ 1.9
COL13A1-213ENST00000520267 CKAP2Q8WWK9 683 aa26.89■■□□□ 1.9
COL13A1-213ENST00000520267 RNF157Q96PX1 679 aa26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms