RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 OAZ1P54368 228 aa17.3■□□□□ 0.36
PCDHGA11-202ENST00000518882 CDH8P55286 799 aa17.3■□□□□ 0.36
PCDHGA11-202ENST00000518882 ZNF200P98182 395 aaPredicted RBP17.3■□□□□ 0.36
PCDHGA11-202ENST00000518882 CNTN2Q02246 1040 aa17.3■□□□□ 0.36
PCDHGA11-202ENST00000518882 RCN1Q15293 331 aa17.3■□□□□ 0.36
PCDHGA11-202ENST00000518882 RAB6CQ53S08 254 aa17.3■□□□□ 0.36
PCDHGA11-202ENST00000518882 NAIF1Q69YI7 327 aaPredicted RBP17.3■□□□□ 0.36
PCDHGA11-202ENST00000518882 ZC3H18Q86VM9 953 aaKnown RBP17.3■□□□□ 0.36
PCDHGA11-202ENST00000518882 CMASQ8NFW8 434 aaPredicted RBP17.3■□□□□ 0.36
PCDHGA11-202ENST00000518882 NRG4Q8WWG1 115 aa17.3■□□□□ 0.36
PCDHGA11-202ENST00000518882 PEBP4Q96S96 227 aa17.3■□□□□ 0.36
PCDHGA11-202ENST00000518882 ACO2Q99798 780 aaKnown RBP17.3■□□□□ 0.36
PCDHGA11-202ENST00000518882 RAB6CQ9H0N0 254 aa17.3■□□□□ 0.36
PCDHGA11-202ENST00000518882 TAS2R1Q9NYW7 299 aa17.3■□□□□ 0.36
PCDHGA11-202ENST00000518882 IQANK1A0A1B0GTG1 560 aa17.29■□□□□ 0.36
PCDHGA11-202ENST00000518882 MCF2LO15068 1137 aa17.29■□□□□ 0.36
PCDHGA11-202ENST00000518882 OGTO15294 1046 aa17.29■□□□□ 0.36
PCDHGA11-202ENST00000518882 ACADSP16219 412 aa17.29■□□□□ 0.36
PCDHGA11-202ENST00000518882 POLR2BP30876 1174 aaKnown RBP17.29■□□□□ 0.36
PCDHGA11-202ENST00000518882 PEX19P40855 299 aa17.29■□□□□ 0.36
PCDHGA11-202ENST00000518882 OSTNP61366 133 aa17.29■□□□□ 0.36
PCDHGA11-202ENST00000518882 KCNJ11Q14654 390 aa17.29■□□□□ 0.36
PCDHGA11-202ENST00000518882 SH3PXD2AQ5TCZ1 1133 aa17.29■□□□□ 0.36
PCDHGA11-202ENST00000518882 WDR60Q8WVS4 1066 aa17.29■□□□□ 0.36
PCDHGA11-202ENST00000518882 TEX13BQ9BXU2 312 aa17.29■□□□□ 0.36
PCDHGA11-202ENST00000518882 MRPL4Q9BYD3 311 aaKnown RBP17.29■□□□□ 0.36
PCDHGA11-202ENST00000518882 LHX5Q9H2C1 402 aa17.29■□□□□ 0.36
PCDHGA11-202ENST00000518882 ARMCX1Q9P291 453 aa17.29■□□□□ 0.36
PCDHGA11-202ENST00000518882 MTO1Q9Y2Z2 717 aaKnown RBP17.29■□□□□ 0.36
PCDHGA11-202ENST00000518882 FAM237BA0A1B0GVD1 139 aa17.28■□□□□ 0.36
PCDHGA11-202ENST00000518882 TGDSO95455 350 aa17.28■□□□□ 0.36
PCDHGA11-202ENST00000518882 LMNAP02545 664 aaKnown RBP17.28■□□□□ 0.36
PCDHGA11-202ENST00000518882 C1QAP02745 245 aa17.28■□□□□ 0.36
PCDHGA11-202ENST00000518882 INHBAP08476 426 aa17.28■□□□□ 0.36
PCDHGA11-202ENST00000518882 SRGAP2CP0DJJ0 459 aa17.28■□□□□ 0.36
PCDHGA11-202ENST00000518882 MYL2P10916 166 aa17.28■□□□□ 0.36
PCDHGA11-202ENST00000518882 TSHRP16473 764 aa17.28■□□□□ 0.36
PCDHGA11-202ENST00000518882 RFC5P40937 340 aa17.28■□□□□ 0.36
PCDHGA11-202ENST00000518882 YWHAGP61981 247 aaKnown RBP eCLIP17.28■□□□□ 0.36
PCDHGA11-202ENST00000518882 ZBTB16Q05516 673 aa17.28■□□□□ 0.36
PCDHGA11-202ENST00000518882 CEP120Q8N960 986 aa17.28■□□□□ 0.36
PCDHGA11-202ENST00000518882 ZNF280CQ8ND82 737 aa17.28■□□□□ 0.36
PCDHGA11-202ENST00000518882 ZNF333Q96JL9 665 aa17.28■□□□□ 0.36
PCDHGA11-202ENST00000518882 ARHGEF4Q9NR80 690 aa17.28■□□□□ 0.36
PCDHGA11-202ENST00000518882 HMGXB4Q9UGU5 601 aa17.28■□□□□ 0.36
PCDHGA11-202ENST00000518882 USP18Q9UMW8 372 aa17.28■□□□□ 0.36
PCDHGA11-202ENST00000518882 LOC285556D6RIA3 1793 aa17.28■□□□□ 0.36
PCDHGA11-202ENST00000518882 TRUB2O95900 331 aaKnown RBP17.28■□□□□ 0.36
PCDHGA11-202ENST00000518882 NEFHP12036 1026 aa17.28■□□□□ 0.36
PCDHGA11-202ENST00000518882 KCNA3P22001 575 aa17.28■□□□□ 0.36
PCDHGA11-202ENST00000518882 UBA1P22314 1058 aaKnown RBP17.28■□□□□ 0.36
PCDHGA11-202ENST00000518882 RXRBP28702 533 aa17.28■□□□□ 0.36
PCDHGA11-202ENST00000518882 GCLCP48506 637 aaPredicted RBP17.28■□□□□ 0.36
PCDHGA11-202ENST00000518882 SERPINB4P48594 390 aa17.28■□□□□ 0.36
PCDHGA11-202ENST00000518882 TNFAIP1Q13829 316 aa17.28■□□□□ 0.36
PCDHGA11-202ENST00000518882 STXBP2Q15833 593 aa17.28■□□□□ 0.36
PCDHGA11-202ENST00000518882 MUM1Q2TAK8 710 aa17.28■□□□□ 0.36
PCDHGA11-202ENST00000518882 ALYREFQ86V81 257 aaKnown RBP17.28■□□□□ 0.36
PCDHGA11-202ENST00000518882 CDR2LQ86X02 465 aaPredicted RBP17.28■□□□□ 0.36
PCDHGA11-202ENST00000518882 OXNAD1Q96HP4 312 aaPredicted RBP17.28■□□□□ 0.36
PCDHGA11-202ENST00000518882 TWNKQ96RR1 684 aa17.28■□□□□ 0.36
PCDHGA11-202ENST00000518882 MECRQ9BV79 373 aa17.28■□□□□ 0.36
PCDHGA11-202ENST00000518882 NMUR2Q9GZQ4 415 aa17.28■□□□□ 0.36
PCDHGA11-202ENST00000518882 SDCBP2Q9H190 292 aa17.28■□□□□ 0.36
PCDHGA11-202ENST00000518882 SYNCQ9H7C4 482 aa17.28■□□□□ 0.36
PCDHGA11-202ENST00000518882 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.28■□□□□ 0.36
PCDHGA11-202ENST00000518882 IKBKGQ9Y6K9 419 aa17.28■□□□□ 0.36
PCDHGA11-202ENST00000518882 NVLO15381 856 aaKnown RBP17.27■□□□□ 0.36
PCDHGA11-202ENST00000518882 PEX10O60683 326 aa17.27■□□□□ 0.36
PCDHGA11-202ENST00000518882 CHRM1P11229 460 aaPredicted RBP17.27■□□□□ 0.36
PCDHGA11-202ENST00000518882 PTPRAP18433 802 aa17.27■□□□□ 0.36
PCDHGA11-202ENST00000518882 ICAM3P32942 547 aa17.27■□□□□ 0.36
PCDHGA11-202ENST00000518882 ROR1Q01973 937 aa17.27■□□□□ 0.36
PCDHGA11-202ENST00000518882 HSF5Q4G112 596 aaPredicted RBP17.27■□□□□ 0.36
PCDHGA11-202ENST00000518882 CES4AQ5XG92 561 aa17.27■□□□□ 0.36
PCDHGA11-202ENST00000518882 DARS2Q6PI48 645 aaKnown RBP17.27■□□□□ 0.36
PCDHGA11-202ENST00000518882 CYP4V2Q6ZWL3 525 aaPredicted RBP17.27■□□□□ 0.36
PCDHGA11-202ENST00000518882 ZNF668Q96K58 619 aaPredicted RBP17.27■□□□□ 0.36
PCDHGA11-202ENST00000518882 YIPF3Q9GZM5 350 aa17.27■□□□□ 0.36
PCDHGA11-202ENST00000518882 PDGFDQ9GZP0 370 aaPredicted RBP17.27■□□□□ 0.36
PCDHGA11-202ENST00000518882 CXorf49A8MYA2 514 aaPredicted RBP17.27■□□□□ 0.35
PCDHGA11-202ENST00000518882 SMAPO00193 183 aa17.27■□□□□ 0.35
PCDHGA11-202ENST00000518882 FCHO1O14526 889 aa17.27■□□□□ 0.35
PCDHGA11-202ENST00000518882 MAFO75444 373 aaPredicted RBP17.27■□□□□ 0.35
PCDHGA11-202ENST00000518882 NOMO1Q15155 1222 aa17.27■□□□□ 0.35
PCDHGA11-202ENST00000518882 TSNAXIP1Q2TAA8 658 aa17.27■□□□□ 0.35
PCDHGA11-202ENST00000518882 SNX30Q5VWJ9 437 aa17.27■□□□□ 0.35
PCDHGA11-202ENST00000518882 LMNTD2Q8IXW0 634 aa17.27■□□□□ 0.35
PCDHGA11-202ENST00000518882 SCYL3Q8IZE3 742 aa17.27■□□□□ 0.35
PCDHGA11-202ENST00000518882 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.27■□□□□ 0.35
PCDHGA11-202ENST00000518882 FAM136AQ96C01 138 aa17.27■□□□□ 0.35
PCDHGA11-202ENST00000518882 CFAP36Q96G28 342 aa17.27■□□□□ 0.35
PCDHGA11-202ENST00000518882 SRPK1Q96SB4 655 aaKnown RBP17.27■□□□□ 0.35
PCDHGA11-202ENST00000518882 SYT15Q9BQS2 421 aa17.27■□□□□ 0.35
PCDHGA11-202ENST00000518882 STOML1Q9UBI4 398 aa17.27■□□□□ 0.35
PCDHGA11-202ENST00000518882 TTLL3Q9Y4R7 772 aa17.27■□□□□ 0.35
PCDHGA11-202ENST00000518882 AFG3L2Q9Y4W6 797 aa17.27■□□□□ 0.35
PCDHGA11-202ENST00000518882 TRIM49D1C9J1S8 452 aa17.26■□□□□ 0.35
PCDHGA11-202ENST00000518882 MAP3K13O43283 966 aa17.26■□□□□ 0.35
PCDHGA11-202ENST00000518882 TBX10O75333 385 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms