RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 SPDYE2Q495Y8 402 aa12.9□□□□□ -0.34
PCM1-203ENST00000517545 SESTD1Q86VW0 696 aa12.9□□□□□ -0.34
PCM1-203ENST00000517545 CTAGE3PQ8IX95 158 aa12.9□□□□□ -0.34
PCM1-203ENST00000517545 CFAP36Q96G28 342 aa12.9□□□□□ -0.34
PCM1-203ENST00000517545 TAAR1Q96RJ0 339 aa12.9□□□□□ -0.34
PCM1-203ENST00000517545 TJP2Q9UDY2 1190 aa12.9□□□□□ -0.34
PCM1-203ENST00000517545 SLX4Q8IY92 1834 aa12.9□□□□□ -0.34
PCM1-203ENST00000517545 CXorf49A8MYA2 514 aaPredicted RBP12.9□□□□□ -0.34
PCM1-203ENST00000517545 I3L4J1 428 aa12.9□□□□□ -0.34
PCM1-203ENST00000517545 MRPS5P82675 430 aaKnown RBP12.9□□□□□ -0.34
PCM1-203ENST00000517545 BMPR2Q13873 1038 aa12.9□□□□□ -0.34
PCM1-203ENST00000517545 SFT2D3Q587I9 215 aa12.9□□□□□ -0.34
PCM1-203ENST00000517545 C6orf163Q5TEZ5 329 aa12.9□□□□□ -0.34
PCM1-203ENST00000517545 LPCAT4Q643R3 524 aa12.9□□□□□ -0.34
PCM1-203ENST00000517545 PODNQ7Z5L7 613 aa12.9□□□□□ -0.34
PCM1-203ENST00000517545 KIAA0319LQ8IZA0 1049 aa12.9□□□□□ -0.34
PCM1-203ENST00000517545 PPM1NQ8N819 430 aa12.9□□□□□ -0.34
PCM1-203ENST00000517545 NCSTNQ92542 709 aa12.9□□□□□ -0.34
PCM1-203ENST00000517545 CCDC106Q9BWC9 280 aa12.9□□□□□ -0.34
PCM1-203ENST00000517545 ANKEF1Q9NU02 776 aa12.9□□□□□ -0.34
PCM1-203ENST00000517545 TBC1D22BQ9NU19 505 aa12.9□□□□□ -0.34
PCM1-203ENST00000517545 RGS17Q9UGC6 210 aaPredicted RBP12.9□□□□□ -0.34
PCM1-203ENST00000517545 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.9□□□□□ -0.35
PCM1-203ENST00000517545 A6NJR5 290 aa12.9□□□□□ -0.35
PCM1-203ENST00000517545 WDR64B1ANS9 1081 aa12.9□□□□□ -0.35
PCM1-203ENST00000517545 ONECUT3O60422 494 aaPredicted RBP12.9□□□□□ -0.35
PCM1-203ENST00000517545 TOP3BO95985 862 aaKnown RBP12.9□□□□□ -0.35
PCM1-203ENST00000517545 HARSP12081 509 aaKnown RBP12.9□□□□□ -0.35
PCM1-203ENST00000517545 SLC25A3Q00325 362 aa12.9□□□□□ -0.35
PCM1-203ENST00000517545 TAF5Q15542 800 aa12.9□□□□□ -0.35
PCM1-203ENST00000517545 ZCCHC23Q6ZST2 131 aa12.9□□□□□ -0.35
PCM1-203ENST00000517545 CDAN1Q8IWY9 1227 aa12.9□□□□□ -0.35
PCM1-203ENST00000517545 SMYD3Q9H7B4 428 aa12.9□□□□□ -0.35
PCM1-203ENST00000517545 XPNPEP1Q9NQW7 623 aa12.9□□□□□ -0.35
PCM1-203ENST00000517545 DDX56Q9NY93 547 aaKnown RBP12.9□□□□□ -0.35
PCM1-203ENST00000517545 KLF11O14901 512 aa12.89□□□□□ -0.35
PCM1-203ENST00000517545 UGT1A9O60656 530 aa12.89□□□□□ -0.35
PCM1-203ENST00000517545 WEE2P0C1S8 567 aa12.89□□□□□ -0.35
PCM1-203ENST00000517545 STIP1P31948 543 aaKnown RBP12.89□□□□□ -0.35
PCM1-203ENST00000517545 RFC1P35251 1148 aaPredicted RBP12.89□□□□□ -0.35
PCM1-203ENST00000517545 SP4Q02446 784 aa12.89□□□□□ -0.35
PCM1-203ENST00000517545 CC2D2BQ6DHV5 1058 aa12.89□□□□□ -0.35
PCM1-203ENST00000517545 MARK2Q7KZI7 788 aaKnown RBP12.89□□□□□ -0.35
PCM1-203ENST00000517545 RASSF3Q86WH2 238 aa12.89□□□□□ -0.35
PCM1-203ENST00000517545 WDTC1Q8N5D0 677 aa12.89□□□□□ -0.35
PCM1-203ENST00000517545 USP6NLQ92738 828 aa12.89□□□□□ -0.35
PCM1-203ENST00000517545 PPP2R3CQ969Q6 453 aa12.89□□□□□ -0.35
PCM1-203ENST00000517545 E2F7Q96AV8 911 aa12.89□□□□□ -0.35
PCM1-203ENST00000517545 RILPQ96NA2 401 aa12.89□□□□□ -0.35
PCM1-203ENST00000517545 UGT1A7Q9HAW7 530 aa12.89□□□□□ -0.35
PCM1-203ENST00000517545 UGT1A10Q9HAW8 530 aa12.89□□□□□ -0.35
PCM1-203ENST00000517545 UGT1A8Q9HAW9 530 aa12.89□□□□□ -0.35
PCM1-203ENST00000517545 NRXN2Q9P2S2 1712 aa12.89□□□□□ -0.35
PCM1-203ENST00000517545 A0A088AWK7 358 aa12.89□□□□□ -0.35
PCM1-203ENST00000517545 TESPA1A2RU30 521 aaPredicted RBP12.89□□□□□ -0.35
PCM1-203ENST00000517545 OPHN1O60890 802 aa12.89□□□□□ -0.35
PCM1-203ENST00000517545 NPM3O75607 178 aaKnown RBP12.89□□□□□ -0.35
PCM1-203ENST00000517545 IL1BP01584 269 aa12.89□□□□□ -0.35
PCM1-203ENST00000517545 C6orf222P0C671 652 aaPredicted RBP12.89□□□□□ -0.35
PCM1-203ENST00000517545 SLC25A11Q02978 314 aaKnown RBP12.89□□□□□ -0.35
PCM1-203ENST00000517545 DPYSL3Q14195 570 aa12.89□□□□□ -0.35
PCM1-203ENST00000517545 PIGHQ14442 188 aaPredicted RBP12.89□□□□□ -0.35
PCM1-203ENST00000517545 TEX44Q53QW1 395 aa12.89□□□□□ -0.35
PCM1-203ENST00000517545 STRIP1Q5VSL9 837 aa12.89□□□□□ -0.35
PCM1-203ENST00000517545 NIPA1Q7RTP0 329 aa12.89□□□□□ -0.35
PCM1-203ENST00000517545 OR6Y1Q8NGX8 325 aa12.89□□□□□ -0.35
PCM1-203ENST00000517545 JOSD2Q8TAC2 188 aa12.89□□□□□ -0.35
PCM1-203ENST00000517545 SYTL5Q8TDW5 730 aaPredicted RBP12.89□□□□□ -0.35
PCM1-203ENST00000517545 MRIQ9BWK5 157 aa12.89□□□□□ -0.35
PCM1-203ENST00000517545 RBAKQ9NYW8 714 aaPredicted RBP12.89□□□□□ -0.35
PCM1-203ENST00000517545 GABBR1Q9UBS5 961 aa12.89□□□□□ -0.35
PCM1-203ENST00000517545 PCSK1NQ9UHG2 260 aa12.89□□□□□ -0.35
PCM1-203ENST00000517545 AGO2Q9UKV8 859 aaKnown RBP12.89□□□□□ -0.35
PCM1-203ENST00000517545 PLLPQ9Y342 182 aa12.89□□□□□ -0.35
PCM1-203ENST00000517545 CLRN2A0PK11 232 aa12.88□□□□□ -0.35
PCM1-203ENST00000517545 NDC80O14777 642 aa12.88□□□□□ -0.35
PCM1-203ENST00000517545 LRCH4O75427 683 aa12.88□□□□□ -0.35
PCM1-203ENST00000517545 CALB1P05937 261 aa12.88□□□□□ -0.35
PCM1-203ENST00000517545 PSMA2P25787 234 aa12.88□□□□□ -0.35
PCM1-203ENST00000517545 CCNFP41002 786 aa12.88□□□□□ -0.35
PCM1-203ENST00000517545 LRRC23Q53EV4 343 aaPredicted RBP12.88□□□□□ -0.35
PCM1-203ENST00000517545 RALGPS1Q5JS13 557 aa12.88□□□□□ -0.35
PCM1-203ENST00000517545 GPAT2Q6NUI2 795 aa12.88□□□□□ -0.35
PCM1-203ENST00000517545 NPNTQ6UXI9 565 aa12.88□□□□□ -0.35
PCM1-203ENST00000517545 BBS12Q6ZW61 710 aa12.88□□□□□ -0.35
PCM1-203ENST00000517545 ARHGAP18Q8N392 663 aa12.88□□□□□ -0.35
PCM1-203ENST00000517545 POU5F2Q8N7G0 328 aa12.88□□□□□ -0.35
PCM1-203ENST00000517545 FAM81AQ8TBF8 368 aa12.88□□□□□ -0.35
PCM1-203ENST00000517545 C7orf26Q96N11 449 aa12.88□□□□□ -0.35
PCM1-203ENST00000517545 TRIM56Q9BRZ2 755 aaKnown RBP12.88□□□□□ -0.35
PCM1-203ENST00000517545 CENPKQ9BS16 269 aa12.88□□□□□ -0.35
PCM1-203ENST00000517545 WWP1Q9H0M0 922 aa12.88□□□□□ -0.35
PCM1-203ENST00000517545 ZNF219Q9P2Y4 722 aaPredicted RBP12.88□□□□□ -0.35
PCM1-203ENST00000517545 CNTN6Q9UQ52 1028 aa12.88□□□□□ -0.35
PCM1-203ENST00000517545 TEX264Q9Y6I9 313 aa12.88□□□□□ -0.35
PCM1-203ENST00000517545 ARHGAP42A6NI28 874 aa12.88□□□□□ -0.35
PCM1-203ENST00000517545 OR6B1O95007 311 aa12.88□□□□□ -0.35
PCM1-203ENST00000517545 C1QAP02745 245 aa12.88□□□□□ -0.35
PCM1-203ENST00000517545 ICAM1P05362 532 aa12.88□□□□□ -0.35
PCM1-203ENST00000517545 CPOXP36551 454 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms