RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 TMC5Q6UXY8 1006 aa10.44□□□□□ -0.74
CLN8-202ENST00000517514 RTL10Q7L3V2 364 aa10.44□□□□□ -0.74
CLN8-202ENST00000517514 CCDC186Q7Z3E2 898 aa10.44□□□□□ -0.74
CLN8-202ENST00000517514 DNAJB7Q7Z6W7 309 aaPredicted RBP10.44□□□□□ -0.74
CLN8-202ENST00000517514 CNGA4Q8IV77 575 aa10.44□□□□□ -0.74
CLN8-202ENST00000517514 DRC7Q8IY82 874 aa10.44□□□□□ -0.74
CLN8-202ENST00000517514 ZNF397Q8NF99 534 aaPredicted RBP10.44□□□□□ -0.74
CLN8-202ENST00000517514 CPA5Q8WXQ8 436 aa10.44□□□□□ -0.74
CLN8-202ENST00000517514 KCTD13Q8WZ19 329 aa10.44□□□□□ -0.74
CLN8-202ENST00000517514 NDRG1Q92597 394 aaKnown RBP10.44□□□□□ -0.74
CLN8-202ENST00000517514 PPP2R3CQ969Q6 453 aa10.44□□□□□ -0.74
CLN8-202ENST00000517514 PANX2Q96RD6 677 aa10.44□□□□□ -0.74
CLN8-202ENST00000517514 CPXM1Q96SM3 734 aa10.44□□□□□ -0.74
CLN8-202ENST00000517514 TTLL2Q9BWV7 592 aa10.44□□□□□ -0.74
CLN8-202ENST00000517514 APOL5Q9BWW9 433 aa10.44□□□□□ -0.74
CLN8-202ENST00000517514 PRKD2Q9BZL6 878 aa10.44□□□□□ -0.74
CLN8-202ENST00000517514 PNPLA8Q9NP80 782 aa10.44□□□□□ -0.74
CLN8-202ENST00000517514 PRDM6Q9NQX0 595 aa10.44□□□□□ -0.74
CLN8-202ENST00000517514 CLDND1Q9NY35 253 aa10.44□□□□□ -0.74
CLN8-202ENST00000517514 USP3Q9Y6I4 520 aa10.44□□□□□ -0.74
CLN8-202ENST00000517514 NCANO14594 1321 aa10.43□□□□□ -0.74
CLN8-202ENST00000517514 PIK3R2O00459 728 aa10.43□□□□□ -0.74
CLN8-202ENST00000517514 TRIM66O15016 1216 aa10.43□□□□□ -0.74
CLN8-202ENST00000517514 ERBB2P04626 1255 aa10.43□□□□□ -0.74
CLN8-202ENST00000517514 ALDH1A3P47895 512 aa10.43□□□□□ -0.74
CLN8-202ENST00000517514 SLC5A3P53794 718 aa10.43□□□□□ -0.74
CLN8-202ENST00000517514 EPHA5P54756 1037 aa10.43□□□□□ -0.74
CLN8-202ENST00000517514 RPL10AP62906 217 aaKnown RBP10.43□□□□□ -0.74
CLN8-202ENST00000517514 CENPCQ03188 943 aa10.43□□□□□ -0.74
CLN8-202ENST00000517514 PDCLQ13371 301 aa10.43□□□□□ -0.74
CLN8-202ENST00000517514 MTF1Q14872 753 aa10.43□□□□□ -0.74
CLN8-202ENST00000517514 C2CD6Q53TS8 623 aa10.43□□□□□ -0.74
CLN8-202ENST00000517514 PRSS36Q5K4E3 855 aa10.43□□□□□ -0.74
CLN8-202ENST00000517514 LIN9Q5TKA1 542 aa10.43□□□□□ -0.74
CLN8-202ENST00000517514 GPR149Q86SP6 731 aa10.43□□□□□ -0.74
CLN8-202ENST00000517514 TMEM110Q86TL2 294 aa10.43□□□□□ -0.74
CLN8-202ENST00000517514 NUP93Q8N1F7 819 aa10.43□□□□□ -0.74
CLN8-202ENST00000517514 CLEC4CQ8WTT0 213 aa10.43□□□□□ -0.74
CLN8-202ENST00000517514 STK32AQ8WU08 396 aa10.43□□□□□ -0.74
CLN8-202ENST00000517514 KHSRPQ92945 711 aaKnown RBP eCLIP10.43□□□□□ -0.74
CLN8-202ENST00000517514 PSMG2Q969U7 264 aa10.43□□□□□ -0.74
CLN8-202ENST00000517514 PIWIL1Q96J94 861 aaKnown RBP10.43□□□□□ -0.74
CLN8-202ENST00000517514 MYRFLQ96LU7 910 aa10.43□□□□□ -0.74
CLN8-202ENST00000517514 UBE2ZQ9H832 354 aaPredicted RBP10.43□□□□□ -0.74
CLN8-202ENST00000517514 SFXN1Q9H9B4 322 aa10.43□□□□□ -0.74
CLN8-202ENST00000517514 DZANK1Q9NVP4 752 aa10.43□□□□□ -0.74
CLN8-202ENST00000517514 HESX1Q9UBX0 185 aa10.43□□□□□ -0.74
CLN8-202ENST00000517514 ADAMTS1Q9UHI8 967 aa10.43□□□□□ -0.74
CLN8-202ENST00000517514 HELZP42694 1942 aaKnown RBP10.43□□□□□ -0.74
CLN8-202ENST00000517514 SSU72P8A0A1W2PR75 194 aa10.42□□□□□ -0.74
CLN8-202ENST00000517514 TCRBV5S1A1TA0A578 114 aa10.42□□□□□ -0.74
CLN8-202ENST00000517514 GRXCR2A6NFK2 248 aa10.42□□□□□ -0.74
CLN8-202ENST00000517514 E5RJQ4 531 aa10.42□□□□□ -0.74
CLN8-202ENST00000517514 PAPSS1O43252 624 aaPredicted RBP10.42□□□□□ -0.74
CLN8-202ENST00000517514 LSM8O95777 96 aaKnown RBP10.42□□□□□ -0.74
CLN8-202ENST00000517514 LRG1P02750 347 aa10.42□□□□□ -0.74
CLN8-202ENST00000517514 F11P03951 625 aa10.42□□□□□ -0.74
CLN8-202ENST00000517514 ZDHHC11BP0C7U3 371 aa10.42□□□□□ -0.74
CLN8-202ENST00000517514 TNFAIP3P21580 790 aa10.42□□□□□ -0.74
CLN8-202ENST00000517514 MMP8P22894 467 aa10.42□□□□□ -0.74
CLN8-202ENST00000517514 GABRB2P47870 512 aa10.42□□□□□ -0.74
CLN8-202ENST00000517514 SLC5A9Q2M3M2 681 aa10.42□□□□□ -0.74
CLN8-202ENST00000517514 TDRD12Q587J7 1177 aaKnown RBP10.42□□□□□ -0.74
CLN8-202ENST00000517514 PM20D1Q6GTS8 502 aa10.42□□□□□ -0.74
CLN8-202ENST00000517514 RAD9BQ6WBX8 426 aa10.42□□□□□ -0.74
CLN8-202ENST00000517514 DENND5BQ6ZUT9 1274 aa10.42□□□□□ -0.74
CLN8-202ENST00000517514 HFE2Q6ZVN8 426 aa10.42□□□□□ -0.74
CLN8-202ENST00000517514 GAREM2Q75VX8 874 aa10.42□□□□□ -0.74
CLN8-202ENST00000517514 MON1BQ7L1V2 547 aa10.42□□□□□ -0.74
CLN8-202ENST00000517514 GRASPQ7Z6J2 395 aaPredicted RBP10.42□□□□□ -0.74
CLN8-202ENST00000517514 SCD5Q86SK9 330 aa10.42□□□□□ -0.74
CLN8-202ENST00000517514 PHF13Q86YI8 300 aaPredicted RBP10.42□□□□□ -0.74
CLN8-202ENST00000517514 FMNL3Q8IVF7 1028 aa10.42□□□□□ -0.74
CLN8-202ENST00000517514 SMRP1Q8NCR6 262 aa10.42□□□□□ -0.74
CLN8-202ENST00000517514 TMEM35BQ8NCS4 154 aa10.42□□□□□ -0.74
CLN8-202ENST00000517514 PPM1EQ8WY54 764 aa10.42□□□□□ -0.74
CLN8-202ENST00000517514 SUSD6Q92537 303 aa10.42□□□□□ -0.74
CLN8-202ENST00000517514 TCEAL4Q96EI5 215 aa10.42□□□□□ -0.74
CLN8-202ENST00000517514 TRMT2BQ96GJ1 504 aaKnown RBP10.42□□□□□ -0.74
CLN8-202ENST00000517514 HSFY1Q96LI6 401 aa10.42□□□□□ -0.74
CLN8-202ENST00000517514 CEP295NLQ96MC4 621 aa10.42□□□□□ -0.74
CLN8-202ENST00000517514 PPP1R9BQ96SB3 815 aa10.42□□□□□ -0.74
CLN8-202ENST00000517514 ULBP1Q9BZM6 244 aa10.42□□□□□ -0.74
CLN8-202ENST00000517514 DNAI2Q9GZS0 605 aa10.42□□□□□ -0.74
CLN8-202ENST00000517514 ISCUQ9H1K1 167 aa10.42□□□□□ -0.74
CLN8-202ENST00000517514 ADAM7Q9H2U9 754 aa10.42□□□□□ -0.74
CLN8-202ENST00000517514 NHEJ1Q9H9Q4 299 aaPredicted RBP10.42□□□□□ -0.74
CLN8-202ENST00000517514 NMUR1Q9HB89 426 aa10.42□□□□□ -0.74
CLN8-202ENST00000517514 CYLDQ9NQC7 956 aa10.42□□□□□ -0.74
CLN8-202ENST00000517514 OSER1Q9NX31 292 aa10.42□□□□□ -0.74
CLN8-202ENST00000517514 NAGPAQ9UK23 515 aa10.42□□□□□ -0.74
CLN8-202ENST00000517514 ASB3Q9Y575 518 aa10.42□□□□□ -0.74
CLN8-202ENST00000517514 BZW2Q9Y6E2 419 aaKnown RBP10.42□□□□□ -0.74
CLN8-202ENST00000517514 NUP210Q8TEM1 1887 aaPredicted RBP10.41□□□□□ -0.74
CLN8-202ENST00000517514 SOWAHDA6NJG2 315 aa10.41□□□□□ -0.74
CLN8-202ENST00000517514 H3BQ06 376 aaPredicted RBP10.41□□□□□ -0.74
CLN8-202ENST00000517514 NCK2O43639 380 aa10.41□□□□□ -0.74
CLN8-202ENST00000517514 FYNP06241 537 aa10.41□□□□□ -0.74
CLN8-202ENST00000517514 RHOP08100 348 aa10.41□□□□□ -0.74
CLN8-202ENST00000517514 TPM1P09493 284 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms