RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 PIGHQ14442 188 aaPredicted RBP12.71□□□□□ -0.38
PCDHGA6-201ENST00000517434 GLYCTKQ8IVS8 523 aa12.71□□□□□ -0.38
PCDHGA6-201ENST00000517434 PCYOX1LQ8NBM8 494 aa12.71□□□□□ -0.38
PCDHGA6-201ENST00000517434 TMEM245Q9H330 911 aa12.71□□□□□ -0.38
PCDHGA6-201ENST00000517434 MANSC1Q9H8J5 431 aa12.71□□□□□ -0.38
PCDHGA6-201ENST00000517434 SMARCAL1Q9NZC9 954 aa12.71□□□□□ -0.38
PCDHGA6-201ENST00000517434 MARCOQ9UEW3 520 aaPredicted RBP12.71□□□□□ -0.38
PCDHGA6-201ENST00000517434 PHTF1Q9UMS5 762 aa12.71□□□□□ -0.38
PCDHGA6-201ENST00000517434 TBKBP1A7MCY6 615 aa12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 PP2D1A8MPX8 630 aa12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 ASNA1O43681 348 aa12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 TBC1D12O60347 775 aa12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 XYLBO75191 536 aa12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 ALBP02768 609 aa12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 CALB2P22676 271 aa12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 PLOD1Q02809 727 aaPredicted RBP12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 KCTD21Q4G0X4 260 aa12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 ZNF410Q86VK4 478 aa12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 MAGEB18Q96M61 343 aa12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 AGPAT1Q99943 283 aa12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 ANKZF1Q9H8Y5 726 aa12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 C20orf96Q9NUD7 363 aaPredicted RBP12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 THG1LQ9NWX6 298 aaKnown RBP12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 PCSK1NQ9UHG2 260 aa12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 DISP2A7MBM2 1401 aa12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 TSPAN9O75954 239 aa12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 PDGFRAP16234 1089 aa12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 ATP1A4Q13733 1029 aa12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 DMC1Q14565 340 aa12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 WDR18Q9BV38 432 aa12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 HEY2Q9UBP5 337 aa12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 DAPK2Q9UIK4 370 aa12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 TMA7Q9Y2S6 64 aaKnown RBP12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 C3orf70A6NLC5 250 aaPredicted RBP12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 MSH4O15457 936 aa12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 EFCAB14O75071 495 aa12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 KRT16P08779 473 aa12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 TM4SF1P30408 202 aa12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 FMO5P49326 533 aa12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 CREMQ03060 361 aa12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 PTK2BQ14289 1009 aa12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 TRADDQ15628 312 aa12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 P3H1Q32P28 736 aa12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 HABP4Q5JVS0 413 aaKnown RBP12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 IYDQ6PHW0 289 aa12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 C4orf22Q6V702 233 aa12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 RIOX2Q8IUF8 465 aa12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 ZNF557Q8N988 423 aaPredicted RBP12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 STK32AQ8WU08 396 aa12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 CASKIN2Q8WXE0 1202 aa12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 EXT2Q93063 718 aa12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 P2RX7Q99572 595 aaKnown RBP12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 TARS2Q9BW92 718 aaKnown RBP12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 STN1Q9H668 368 aaKnown RBP12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 TULP2O00295 520 aa12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 SASH3O75995 380 aa12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 HLA-DRAP01903 254 aa12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 GTF2H1P32780 548 aa12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 BTG3Q14201 252 aaPredicted RBP12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 KAZALD1Q96I82 304 aa12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 SPATA17Q96L03 361 aa12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 MAF1Q9H063 256 aa12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 GGA2Q9UJY4 613 aa12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 NAGPAQ9UK23 515 aa12.7□□□□□ -0.38
PCDHGA6-201ENST00000517434 MYO1DO94832 1006 aa12.69□□□□□ -0.38
PCDHGA6-201ENST00000517434 PYGLP06737 847 aa12.69□□□□□ -0.38
PCDHGA6-201ENST00000517434 GSTT1P30711 240 aa12.69□□□□□ -0.38
PCDHGA6-201ENST00000517434 SERPINB9P50453 376 aa12.69□□□□□ -0.38
PCDHGA6-201ENST00000517434 ACVR2BQ13705 512 aa12.69□□□□□ -0.38
PCDHGA6-201ENST00000517434 IKBKEQ14164 716 aa12.69□□□□□ -0.38
PCDHGA6-201ENST00000517434 PCBP1Q15365 356 aaKnown RBP eCLIP12.69□□□□□ -0.38
PCDHGA6-201ENST00000517434 PAPD7Q5XG87 772 aaKnown RBP12.69□□□□□ -0.38
PCDHGA6-201ENST00000517434 STX19Q8N4C7 294 aa12.69□□□□□ -0.38
PCDHGA6-201ENST00000517434 RUBCNLQ9H714 662 aa12.69□□□□□ -0.38
PCDHGA6-201ENST00000517434 DDX18Q9NVP1 670 aaKnown RBP12.69□□□□□ -0.38
PCDHGA6-201ENST00000517434 AIPL1Q9NZN9 384 aa12.69□□□□□ -0.38
PCDHGA6-201ENST00000517434 RABGEF1Q9UJ41 708 aa12.69□□□□□ -0.38
PCDHGA6-201ENST00000517434 TBX20Q9UMR3 447 aa12.69□□□□□ -0.38
PCDHGA6-201ENST00000517434 F8VZ95 297 aa12.69□□□□□ -0.38
PCDHGA6-201ENST00000517434 PTPRAP18433 802 aa12.69□□□□□ -0.38
PCDHGA6-201ENST00000517434 GUCY1A2P33402 732 aa12.69□□□□□ -0.38
PCDHGA6-201ENST00000517434 OXCT1P55809 520 aa12.69□□□□□ -0.38
PCDHGA6-201ENST00000517434 C21orf59P57076 290 aa12.69□□□□□ -0.38
PCDHGA6-201ENST00000517434 FSCN1Q16658 493 aaKnown RBP12.69□□□□□ -0.38
PCDHGA6-201ENST00000517434 RSBN1Q5VWQ0 802 aaPredicted RBP12.69□□□□□ -0.38
PCDHGA6-201ENST00000517434 CHSY1Q86X52 802 aa12.69□□□□□ -0.38
PCDHGA6-201ENST00000517434 ATPAF2Q8N5M1 289 aa12.69□□□□□ -0.38
PCDHGA6-201ENST00000517434 GORASP1Q9BQQ3 440 aa12.69□□□□□ -0.38
PCDHGA6-201ENST00000517434 BBS2Q9BXC9 721 aa12.69□□□□□ -0.38
PCDHGA6-201ENST00000517434 MUC3BQ9H195 1237 aa12.69□□□□□ -0.38
PCDHGA6-201ENST00000517434 RIOX1Q9H6W3 641 aa12.69□□□□□ -0.38
PCDHGA6-201ENST00000517434 DMAP1Q9NPF5 467 aaPredicted RBP12.69□□□□□ -0.38
PCDHGA6-201ENST00000517434 DPP3Q9NY33 737 aa12.69□□□□□ -0.38
PCDHGA6-201ENST00000517434 SCAF8Q9UPN6 1271 aaKnown RBP12.69□□□□□ -0.38
PCDHGA6-201ENST00000517434 ZC3H11AO75152 810 aaKnown RBP eCLIP12.69□□□□□ -0.38
PCDHGA6-201ENST00000517434 FAM58BPP0C7Q3 252 aa12.69□□□□□ -0.38
PCDHGA6-201ENST00000517434 ELF3P78545 371 aaPredicted RBP12.69□□□□□ -0.38
PCDHGA6-201ENST00000517434 THEMIS2Q5TEJ8 643 aa12.69□□□□□ -0.38
PCDHGA6-201ENST00000517434 RINLQ6ZS11 566 aa12.69□□□□□ -0.38
PCDHGA6-201ENST00000517434 SLC7A14Q8TBB6 771 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms