RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 SPON1Q9HCB6 807 aa3.83□□□□□ -1.8
RNU6-840P-201ENST00000517275 ALG13Q9NP73 1137 aaKnown RBP3.83□□□□□ -1.8
RNU6-840P-201ENST00000517275 KCNK9Q9NPC2 374 aa3.83□□□□□ -1.8
RNU6-840P-201ENST00000517275 FSCN3Q9NQT6 498 aa3.83□□□□□ -1.8
RNU6-840P-201ENST00000517275 NDUFAF4Q9P032 175 aa3.83□□□□□ -1.8
RNU6-840P-201ENST00000517275 NDRG4Q9ULP0 352 aaKnown RBP3.83□□□□□ -1.8
RNU6-840P-201ENST00000517275 TBC1D30Q9Y2I9 924 aa3.83□□□□□ -1.8
RNU6-840P-201ENST00000517275 A0A087X0M5 115 aa3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 A0A1B0GX30 115 aa3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 MYADML2A6NDP7 307 aa3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 FAM90A20PA6NIJ5 464 aa3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 SAC3D1A6NKF1 404 aa3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 A6NLC8 198 aa3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 EFCAB8A8MWE9 144 aa3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 GRXCR1A8MXD5 290 aa3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 GOLGA6L6A8MZA4 724 aa3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 ADM5C9JUS6 153 aa3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 CYP27B1O15528 508 aa3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 DNPH1O43598 174 aa3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 SNX2O60749 519 aa3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 SPATA31D3P0C874 917 aa3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 FGFR4P22455 802 aa3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 KRT9P35527 623 aa3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 KCNC1P48547 511 aa3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 NDUFV1P49821 464 aa3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 PDE6CP51160 858 aa3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 MC2RQ01718 297 aa3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 G3BP1Q13283 466 aaKnown RBP eCLIP3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 CUL4BQ13620 913 aa3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 FHL3Q13643 280 aa3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 ANKRD45Q5TZF3 282 aa3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 MCTP1Q6DN14 999 aa3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 DGAT2L7PQ6IED9 249 aa3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 FAM180BQ6P0A1 224 aa3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 SPOCD1Q6ZMY3 1216 aa3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 SPATA31D4Q6ZUB0 917 aa3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 MICALCLQ6ZW33 695 aa3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 CLNKQ7Z7G1 428 aa3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 TBC1D1Q86TI0 1168 aaPredicted RBP3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 TRABD2AQ86V40 505 aa3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 TAX1BP1Q86VP1 789 aa3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 CCDC117Q8IWD4 279 aaPredicted RBP3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 ELOA2Q8IYF1 753 aaPredicted RBP3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 SPARTQ8N0X7 666 aa3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 SUN3Q8TAQ9 357 aa3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 SLC2A12Q8TD20 617 aa3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 HDAC2Q92769 488 aaKnown RBP3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 RSPRY1Q96DX4 576 aa3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 MAELQ96JY0 434 aaKnown RBP3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 KCNC2Q96PR1 638 aa3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 LRRC37BQ96QE4 947 aa3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 TREX2Q9BQ50 279 aaPredicted RBP3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 VPS16Q9H269 839 aa3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 TBC1D22BQ9NU19 505 aa3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 TMEM74BQ9NUR3 256 aa3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 POGKQ9P215 609 aa3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 IFT80Q9P2H3 777 aaPredicted RBP3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 RIMKLBQ9ULI2 386 aa3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 CNTN6Q9UQ52 1028 aa3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 RPS6KL1Q9Y6S9 549 aa3.82□□□□□ -1.8
RNU6-840P-201ENST00000517275 KRTAP23-1A1A580 65 aa3.81□□□□□ -1.8
RNU6-840P-201ENST00000517275 GAGE12BA1L429 117 aa3.81□□□□□ -1.8
RNU6-840P-201ENST00000517275 GAGE12HA6NDE8 117 aa3.81□□□□□ -1.8
RNU6-840P-201ENST00000517275 HMX3A6NHT5 357 aa3.81□□□□□ -1.8
RNU6-840P-201ENST00000517275 J3KTA2 159 aa3.81□□□□□ -1.8
RNU6-840P-201ENST00000517275 LEFTY2O00292 366 aa3.81□□□□□ -1.8
RNU6-840P-201ENST00000517275 TIMM44O43615 452 aa3.81□□□□□ -1.8
RNU6-840P-201ENST00000517275 TSPAN3O60637 253 aa3.81□□□□□ -1.8
RNU6-840P-201ENST00000517275 ERN1O75460 977 aaKnown RBP3.81□□□□□ -1.8
RNU6-840P-201ENST00000517275 RASAL1O95294 804 aa3.81□□□□□ -1.8
RNU6-840P-201ENST00000517275 LARGE1O95461 756 aa3.81□□□□□ -1.8
RNU6-840P-201ENST00000517275 CFIP05156 583 aa3.81□□□□□ -1.8
RNU6-840P-201ENST00000517275 GYS1P13807 737 aa3.81□□□□□ -1.8
RNU6-840P-201ENST00000517275 JUPP14923 745 aa3.81□□□□□ -1.8
RNU6-840P-201ENST00000517275 CNTFP26441 200 aa3.81□□□□□ -1.8
RNU6-840P-201ENST00000517275 KLRK1P26718 216 aa3.81□□□□□ -1.8
RNU6-840P-201ENST00000517275 EPHA3P29320 983 aa3.81□□□□□ -1.8
RNU6-840P-201ENST00000517275 UQCRC1P31930 480 aa3.81□□□□□ -1.8
RNU6-840P-201ENST00000517275 MSX2P35548 267 aaPredicted RBP3.81□□□□□ -1.8
RNU6-840P-201ENST00000517275 AARSP49588 968 aaKnown RBP eCLIP3.81□□□□□ -1.8
RNU6-840P-201ENST00000517275 RPS7P62081 194 aaKnown RBP3.81□□□□□ -1.8
RNU6-840P-201ENST00000517275 JAG1P78504 1218 aa3.81□□□□□ -1.8
RNU6-840P-201ENST00000517275 NHLH2Q02577 135 aa3.81□□□□□ -1.8
RNU6-840P-201ENST00000517275 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.81□□□□□ -1.8
RNU6-840P-201ENST00000517275 DYRK1AQ13627 763 aa3.81□□□□□ -1.8
RNU6-840P-201ENST00000517275 E2F2Q14209 437 aa3.81□□□□□ -1.8
RNU6-840P-201ENST00000517275 CSHL1Q14406 222 aa3.81□□□□□ -1.8
RNU6-840P-201ENST00000517275 GRM4Q14833 912 aa3.81□□□□□ -1.8
RNU6-840P-201ENST00000517275 NFIXQ14938 502 aa3.81□□□□□ -1.8
RNU6-840P-201ENST00000517275 ACOX1Q15067 660 aa3.81□□□□□ -1.8
RNU6-840P-201ENST00000517275 NT5DC1Q5TFE4 455 aa3.81□□□□□ -1.8
RNU6-840P-201ENST00000517275 ICE2Q659A1 982 aa3.81□□□□□ -1.8
RNU6-840P-201ENST00000517275 SP5Q6BEB4 398 aaPredicted RBP3.81□□□□□ -1.8
RNU6-840P-201ENST00000517275 TTLL5Q6EMB2 1281 aa3.81□□□□□ -1.8
RNU6-840P-201ENST00000517275 TCTN3Q6NUS6 607 aa3.81□□□□□ -1.8
RNU6-840P-201ENST00000517275 MAMDC4Q6UXC1 1216 aa3.81□□□□□ -1.8
RNU6-840P-201ENST00000517275 TMEM108Q6UXF1 575 aa3.81□□□□□ -1.8
RNU6-840P-201ENST00000517275 NEK10Q6ZWH5 1172 aa3.81□□□□□ -1.8
RNU6-840P-201ENST00000517275 RASGRP2Q7LDG7 609 aa3.81□□□□□ -1.8
RNU6-840P-201ENST00000517275 SLC15A3Q8IY34 581 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms