RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 LIX1LQ8IVB5 337 aa-0.69□□□□□ -2.52
SNORA40.16-201ENST00000517238 CNBD1Q8NA66 436 aa-0.69□□□□□ -2.52
SNORA40.16-201ENST00000517238 LILRB1Q8NHL6 650 aaPredicted RBP-0.69□□□□□ -2.52
SNORA40.16-201ENST00000517238 PNISRQ8TF01 805 aaKnown RBP-0.69□□□□□ -2.52
SNORA40.16-201ENST00000517238 SECTM1Q8WVN6 248 aa-0.69□□□□□ -2.52
SNORA40.16-201ENST00000517238 FEM1CQ96JP0 617 aa-0.69□□□□□ -2.52
SNORA40.16-201ENST00000517238 ZBTB45Q96K62 511 aaPredicted RBP-0.69□□□□□ -2.52
SNORA40.16-201ENST00000517238 POM121L2Q96KW2 1035 aa-0.69□□□□□ -2.52
SNORA40.16-201ENST00000517238 FIZ1Q96SL8 496 aa-0.69□□□□□ -2.52
SNORA40.16-201ENST00000517238 TM9SF2Q99805 663 aa-0.69□□□□□ -2.52
SNORA40.16-201ENST00000517238 ZNF670Q9BS34 389 aa-0.69□□□□□ -2.52
SNORA40.16-201ENST00000517238 PIMREGQ9BSJ6 248 aa-0.69□□□□□ -2.52
SNORA40.16-201ENST00000517238 MCRIP2Q9BUT9 160 aaKnown RBP-0.69□□□□□ -2.52
SNORA40.16-201ENST00000517238 NOC4LQ9BVI4 516 aaKnown RBP-0.69□□□□□ -2.52
SNORA40.16-201ENST00000517238 LGR4Q9BXB1 951 aa-0.69□□□□□ -2.52
SNORA40.16-201ENST00000517238 FSD1LQ9BXM9 530 aa-0.69□□□□□ -2.52
SNORA40.16-201ENST00000517238 TINAGL1Q9GZM7 467 aaPredicted RBP-0.69□□□□□ -2.52
SNORA40.16-201ENST00000517238 ERVMER34-1Q9H9K5 563 aa-0.69□□□□□ -2.52
SNORA40.16-201ENST00000517238 TLR8Q9NR97 1041 aaKnown RBP-0.69□□□□□ -2.52
SNORA40.16-201ENST00000517238 NEU3Q9UQ49 428 aa-0.69□□□□□ -2.52
SNORA40.16-201ENST00000517238 PNPLA7Q6ZV29 1317 aa-0.69□□□□□ -2.52
SNORA40.16-201ENST00000517238 ROBO2Q9HCK4 1378 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 TCRBV5S1A1TA0A578 114 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 ANKRD34BA5PLL1 514 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 UNCXA6NJT0 531 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 MINDY4BA8MYZ0 360 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 MCIDASD6RGH6 385 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 CLGNO14967 610 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 BCL2L11O43521 198 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 TLX3O43711 291 aaPredicted RBP-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 CCNT1O60563 726 aaKnown RBP-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 PDE8BO95263 885 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 POMCP01189 267 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 PRLP01236 227 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 ATP1A1P05023 1023 aaKnown RBP-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 IGKV4-1P06312 121 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 ATP6V1B1P15313 513 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 ZNF12P17014 697 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 EIF4BP23588 611 aaKnown RBP-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 GUCY2CP25092 1073 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 HOXD3P31249 432 aaPredicted RBP-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 FLT3LGP49771 235 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 YPEL5P62699 121 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 TUBA1BP68363 451 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 NOMO3P69849 1222 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 GPSM2P81274 684 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 SLC7A5Q01650 507 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 CD69Q07108 199 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 PDCD1Q15116 288 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 NOMO1Q15155 1222 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 SEC23AQ15436 765 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 SEC23BQ15437 767 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 ACCSLQ4AC99 568 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 NOMO2Q5JPE7 1267 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 DACT2Q5SW24 774 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 TEDDM1Q5T9Z0 273 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 MEI1Q5TIA1 1274 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 UBE2Q1Q7Z7E8 422 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 LRRC71Q8N4P6 559 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 TMEM145Q8NBT3 493 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 KLHDC4Q8TBB5 520 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 NUP133Q8WUM0 1156 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 THAP4Q8WY91 577 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 MOCOSQ96EN8 888 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 ADGRG7Q96K78 797 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 C18orf12Q96KH6 178 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 TMEM74Q96NL1 305 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 SOX7Q9BT81 388 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 FSD1Q9BTV5 496 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 RSRP1Q9BUV0 290 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 PHF20Q9BVI0 1012 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 CIPCQ9C0C6 399 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 IPPKQ9H8X2 491 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 PRDM16Q9HAZ2 1276 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 ARHGEF4Q9NR80 690 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 ZFP57Q9NU63 452 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 GTSE1Q9NYZ3 720 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 THEGQ9P2T0 379 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 PCDHB10Q9UN67 800 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 TNPO3Q9Y5L0 923 aaKnown RBP-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 UMODL1Q5DID0 1318 aa-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 DMBT1Q9UGM3 2413 aaPredicted RBP-0.7□□□□□ -2.52
SNORA40.16-201ENST00000517238 SOWAHDA6NJG2 315 aa-0.71□□□□□ -2.52
SNORA40.16-201ENST00000517238 BTBD19C9JJ37 291 aa-0.71□□□□□ -2.52
SNORA40.16-201ENST00000517238 TULP2O00295 520 aa-0.71□□□□□ -2.52
SNORA40.16-201ENST00000517238 SCDO00767 359 aa-0.71□□□□□ -2.52
SNORA40.16-201ENST00000517238 TBX1O43435 398 aa-0.71□□□□□ -2.52
SNORA40.16-201ENST00000517238 STRNO43815 780 aa-0.71□□□□□ -2.52
SNORA40.16-201ENST00000517238 CTNND1O60716 968 aaKnown RBP-0.71□□□□□ -2.52
SNORA40.16-201ENST00000517238 ZNF821O75541 412 aaPredicted RBP-0.71□□□□□ -2.52
SNORA40.16-201ENST00000517238 LY86O95711 162 aa-0.71□□□□□ -2.52
SNORA40.16-201ENST00000517238 IGLV1-44P01699 117 aa-0.71□□□□□ -2.52
SNORA40.16-201ENST00000517238 AMY2AP04746 511 aa-0.71□□□□□ -2.52
SNORA40.16-201ENST00000517238 CAPN2P17655 700 aa-0.71□□□□□ -2.52
SNORA40.16-201ENST00000517238 HDCP19113 662 aa-0.71□□□□□ -2.52
SNORA40.16-201ENST00000517238 AMY2BP19961 511 aa-0.71□□□□□ -2.52
SNORA40.16-201ENST00000517238 KLK2P20151 261 aa-0.71□□□□□ -2.52
SNORA40.16-201ENST00000517238 UBA1P22314 1058 aaKnown RBP-0.71□□□□□ -2.52
SNORA40.16-201ENST00000517238 KCNA5P22460 613 aa-0.71□□□□□ -2.52
SNORA40.16-201ENST00000517238 HNRNPA2B1P22626 353 aaKnown RBP-0.71□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms