RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 PDE1AP54750 535 aa-0.25□□□□□ -2.45
RNU6-539P-201ENST00000516665 ABATP80404 500 aa-0.25□□□□□ -2.45
RNU6-539P-201ENST00000516665 MEF2AQ02078 507 aaPredicted RBP-0.25□□□□□ -2.45
RNU6-539P-201ENST00000516665 SP2Q02086 613 aa-0.25□□□□□ -2.45
RNU6-539P-201ENST00000516665 TAP2Q03519 686 aa-0.25□□□□□ -2.45
RNU6-539P-201ENST00000516665 IFRD2Q12894 506 aaPredicted RBP-0.25□□□□□ -2.45
RNU6-539P-201ENST00000516665 SLC39A14Q15043 492 aa-0.25□□□□□ -2.45
RNU6-539P-201ENST00000516665 SEPT7Q16181 437 aaKnown RBP-0.25□□□□□ -2.45
RNU6-539P-201ENST00000516665 ZBTB41Q5SVQ8 909 aa-0.25□□□□□ -2.45
RNU6-539P-201ENST00000516665 L1TD1Q5T7N2 865 aaKnown RBP-0.25□□□□□ -2.45
RNU6-539P-201ENST00000516665 TEDDM1Q5T9Z0 273 aa-0.25□□□□□ -2.45
RNU6-539P-201ENST00000516665 TIGD7Q6NT04 549 aaPredicted RBP-0.25□□□□□ -2.45
RNU6-539P-201ENST00000516665 Q6ZVL8 140 aa-0.25□□□□□ -2.45
RNU6-539P-201ENST00000516665 OTOP1Q7RTM1 612 aa-0.25□□□□□ -2.45
RNU6-539P-201ENST00000516665 NME9Q86XW9 330 aa-0.25□□□□□ -2.45
RNU6-539P-201ENST00000516665 GLB1L2Q8IW92 636 aa-0.25□□□□□ -2.45
RNU6-539P-201ENST00000516665 CFAP52Q8N1V2 620 aa-0.25□□□□□ -2.45
RNU6-539P-201ENST00000516665 FAM109AQ8N4B1 249 aa-0.25□□□□□ -2.45
RNU6-539P-201ENST00000516665 ADAD2Q8NCV1 583 aaKnown RBP-0.25□□□□□ -2.45
RNU6-539P-201ENST00000516665 RP9Q8TA86 221 aaKnown RBP-0.25□□□□□ -2.45
RNU6-539P-201ENST00000516665 FAM76AQ8TAV0 307 aa-0.25□□□□□ -2.45
RNU6-539P-201ENST00000516665 SH3TC2Q8TF17 1288 aa-0.25□□□□□ -2.45
RNU6-539P-201ENST00000516665 INPP5DQ92835 1189 aa-0.25□□□□□ -2.45
RNU6-539P-201ENST00000516665 FAM136AQ96C01 138 aa-0.25□□□□□ -2.45
RNU6-539P-201ENST00000516665 RUNDC1Q96C34 613 aa-0.25□□□□□ -2.45
RNU6-539P-201ENST00000516665 VGLL1Q99990 258 aa-0.25□□□□□ -2.45
RNU6-539P-201ENST00000516665 BOCQ9BWV1 1114 aa-0.25□□□□□ -2.45
RNU6-539P-201ENST00000516665 CELF4Q9BZC1 486 aaKnown RBP-0.25□□□□□ -2.45
RNU6-539P-201ENST00000516665 SMOC2Q9H3U7 446 aa-0.25□□□□□ -2.45
RNU6-539P-201ENST00000516665 KANSL2Q9H9L4 492 aa-0.25□□□□□ -2.45
RNU6-539P-201ENST00000516665 NYAP2Q9P242 653 aa-0.25□□□□□ -2.45
RNU6-539P-201ENST00000516665 SPATA31A3Q5VYP0 1347 aa-0.26□□□□□ -2.45
RNU6-539P-201ENST00000516665 A0A0J9YWU9 116 aa-0.26□□□□□ -2.45
RNU6-539P-201ENST00000516665 PATL2C9JE40 543 aaKnown RBP-0.26□□□□□ -2.45
RNU6-539P-201ENST00000516665 TRIAP1O43715 76 aa-0.26□□□□□ -2.45
RNU6-539P-201ENST00000516665 CRTAMO95727 393 aa-0.26□□□□□ -2.45
RNU6-539P-201ENST00000516665 PRSS2P07478 247 aa-0.26□□□□□ -2.45
RNU6-539P-201ENST00000516665 CPA1P15085 419 aa-0.26□□□□□ -2.45
RNU6-539P-201ENST00000516665 ITGB8P26012 769 aa-0.26□□□□□ -2.45
RNU6-539P-201ENST00000516665 GUCY1A2P33402 732 aa-0.26□□□□□ -2.45
RNU6-539P-201ENST00000516665 GPR15P49685 360 aa-0.26□□□□□ -2.45
RNU6-539P-201ENST00000516665 IRX1P78414 480 aaPredicted RBP-0.26□□□□□ -2.45
RNU6-539P-201ENST00000516665 MRPS5P82675 430 aaKnown RBP-0.26□□□□□ -2.45
RNU6-539P-201ENST00000516665 GRIK2Q13002 908 aa-0.26□□□□□ -2.45
RNU6-539P-201ENST00000516665 PPIGQ13427 754 aaKnown RBP eCLIP-0.26□□□□□ -2.45
RNU6-539P-201ENST00000516665 HSP90AA2PQ14568 343 aaPredicted RBP-0.26□□□□□ -2.45
RNU6-539P-201ENST00000516665 CCDC178Q5BJE1 867 aa-0.26□□□□□ -2.45
RNU6-539P-201ENST00000516665 GPR158Q5T848 1215 aa-0.26□□□□□ -2.45
RNU6-539P-201ENST00000516665 TAPT1Q6NXT6 567 aa-0.26□□□□□ -2.45
RNU6-539P-201ENST00000516665 TMEM64Q6YI46 380 aa-0.26□□□□□ -2.45
RNU6-539P-201ENST00000516665 TRAPPC11Q7Z392 1133 aa-0.26□□□□□ -2.45
RNU6-539P-201ENST00000516665 LYSMD2Q8IV50 215 aa-0.26□□□□□ -2.45
RNU6-539P-201ENST00000516665 CLIP4Q8N3C7 705 aa-0.26□□□□□ -2.45
RNU6-539P-201ENST00000516665 ZNF248Q8NDW4 579 aa-0.26□□□□□ -2.45
RNU6-539P-201ENST00000516665 ABHD11Q8NFV4 315 aa-0.26□□□□□ -2.45
RNU6-539P-201ENST00000516665 OR7D4Q8NG98 312 aa-0.26□□□□□ -2.45
RNU6-539P-201ENST00000516665 JPH3Q8WXH2 748 aaPredicted RBP-0.26□□□□□ -2.45
RNU6-539P-201ENST00000516665 RTF1Q92541 710 aaKnown RBP-0.26□□□□□ -2.45
RNU6-539P-201ENST00000516665 URB1-AS1Q96HZ7 61 aa-0.26□□□□□ -2.45
RNU6-539P-201ENST00000516665 BRINP2Q9C0B6 783 aa-0.26□□□□□ -2.45
RNU6-539P-201ENST00000516665 PRDM12Q9H4Q4 367 aa-0.26□□□□□ -2.45
RNU6-539P-201ENST00000516665 FZD3Q9NPG1 666 aa-0.26□□□□□ -2.45
RNU6-539P-201ENST00000516665 SH2B3Q9UQQ2 575 aa-0.26□□□□□ -2.45
RNU6-539P-201ENST00000516665 USTQ9Y2C2 406 aa-0.26□□□□□ -2.45
RNU6-539P-201ENST00000516665 CSAG2Q9Y5P2 127 aa-0.26□□□□□ -2.45
RNU6-539P-201ENST00000516665 TRBV5-3A0A0A0MS03 114 aa-0.27□□□□□ -2.45
RNU6-539P-201ENST00000516665 SRRM4A7MD48 611 aaKnown RBP-0.27□□□□□ -2.45
RNU6-539P-201ENST00000516665 PRAC2D3DTV9 90 aa-0.27□□□□□ -2.45
RNU6-539P-201ENST00000516665 P2RY10O00398 339 aa-0.27□□□□□ -2.45
RNU6-539P-201ENST00000516665 AGFG2O95081 481 aa-0.27□□□□□ -2.45
RNU6-539P-201ENST00000516665 CYP17A1P05093 508 aa-0.27□□□□□ -2.45
RNU6-539P-201ENST00000516665 PCSK1P29120 753 aa-0.27□□□□□ -2.45
RNU6-539P-201ENST00000516665 LINC01547P58512 204 aaPredicted RBP-0.27□□□□□ -2.45
RNU6-539P-201ENST00000516665 HSF1Q00613 529 aa-0.27□□□□□ -2.45
RNU6-539P-201ENST00000516665 ROR2Q01974 943 aaKnown RBP-0.27□□□□□ -2.45
RNU6-539P-201ENST00000516665 RASA3Q14644 834 aa-0.27□□□□□ -2.45
RNU6-539P-201ENST00000516665 UGP2Q16851 508 aa-0.27□□□□□ -2.45
RNU6-539P-201ENST00000516665 EARS2Q5JPH6 523 aaKnown RBP-0.27□□□□□ -2.45
RNU6-539P-201ENST00000516665 GPR157Q5UAW9 335 aa-0.27□□□□□ -2.45
RNU6-539P-201ENST00000516665 ARHGAP17Q68EM7 881 aa-0.27□□□□□ -2.45
RNU6-539P-201ENST00000516665 TTLL5Q6EMB2 1281 aa-0.27□□□□□ -2.45
RNU6-539P-201ENST00000516665 ANKS3Q6ZW76 656 aa-0.27□□□□□ -2.45
RNU6-539P-201ENST00000516665 DPH6Q7L8W6 267 aa-0.27□□□□□ -2.45
RNU6-539P-201ENST00000516665 ZNF547Q8IVP9 402 aa-0.27□□□□□ -2.45
RNU6-539P-201ENST00000516665 C2orf69Q8N8R5 385 aa-0.27□□□□□ -2.45
RNU6-539P-201ENST00000516665 SLC44A5Q8NCS7 719 aa-0.27□□□□□ -2.45
RNU6-539P-201ENST00000516665 POC1BQ8TC44 478 aa-0.27□□□□□ -2.45
RNU6-539P-201ENST00000516665 ZNF668Q96K58 619 aaPredicted RBP-0.27□□□□□ -2.45
RNU6-539P-201ENST00000516665 CCDC17Q96LX7 622 aa-0.27□□□□□ -2.45
RNU6-539P-201ENST00000516665 KLHL32Q96NJ5 620 aa-0.27□□□□□ -2.45
RNU6-539P-201ENST00000516665 SCRT1Q9BWW7 348 aa-0.27□□□□□ -2.45
RNU6-539P-201ENST00000516665 IL25Q9H293 177 aa-0.27□□□□□ -2.45
RNU6-539P-201ENST00000516665 LDAHQ9H6V9 325 aa-0.27□□□□□ -2.45
RNU6-539P-201ENST00000516665 DIAPH3Q9NSV4 1193 aa-0.27□□□□□ -2.45
RNU6-539P-201ENST00000516665 ANAPC11Q9NYG5 84 aa-0.27□□□□□ -2.45
RNU6-539P-201ENST00000516665 MOCS1Q9NZB8 636 aa-0.27□□□□□ -2.45
RNU6-539P-201ENST00000516665 SERPINA10Q9UK55 444 aa-0.27□□□□□ -2.45
RNU6-539P-201ENST00000516665 UTS2RQ9UKP6 389 aa-0.27□□□□□ -2.45
RNU6-539P-201ENST00000516665 ACTL7AQ9Y615 435 aa-0.27□□□□□ -2.45
RNU6-539P-201ENST00000516665 PCNX3Q9H6A9 2034 aa-0.28□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms