RNA–Protein interactions for RNA: ENST00000516595.1

SCARNA16.3-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 184 nt, Biotype scaRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.3-201ENST00000516595 PAX3P23760 479 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 CCNE1P24864 410 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ITGB8P26012 769 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 NMT1P30419 496 aaKnown RBP2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 HOXA11P31270 313 aaPredicted RBP2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 CD52P31358 61 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 CD96P40200 585 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 GRIA2P42262 883 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 AFMP43652 599 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 LIG4P49917 911 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 FKBP3Q00688 224 aaKnown RBP2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 FPGSQ05932 587 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ZP2Q05996 745 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 NCBP1Q09161 790 aaKnown RBP2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 STK4Q13043 487 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 PAK1Q13153 545 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 PRPF4BQ13523 1007 aaKnown RBP2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 STIM1Q13586 685 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 DHX8Q14562 1220 aaKnown RBP2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 LPIN1Q14693 890 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 NOLC1Q14978 699 aaKnown RBP eCLIP2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 SF1Q15637 639 aaKnown RBP2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 SLC14A2Q15849 920 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 STX1AQ16623 288 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 KNOP1Q1ED39 458 aaKnown RBP2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 C2orf27AQ580R0 203 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 XKR4Q5GH76 650 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 UBXN11Q5T124 520 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 CENPPQ6IPU0 288 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 TTI2Q6NXR4 508 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 CAVIN1Q6NZI2 390 aaKnown RBP2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 NOTUMQ6P988 496 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 SLC27A1Q6PCB7 646 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 MPZL3Q6UWV2 235 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 RNF111Q6ZNA4 994 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 LRRC55Q6ZSA7 311 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 C22orf34Q6ZV56 151 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 USP53Q70EK8 1073 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 SLC24A5Q71RS6 500 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 CATSPER4Q7RTX7 472 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 TRMT1LQ7Z2T5 733 aaKnown RBP2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 THAP5Q7Z6K1 395 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 MRPL10Q7Z7H8 261 aaKnown RBP2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ZNF227Q86WZ6 799 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 KSR1Q8IVT5 923 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 BRSK2Q8IWQ3 736 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 TRIM59Q8IWR1 403 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 CD302Q8IX05 232 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 GRAMD1CQ8IYS0 662 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 HACE1Q8IYU2 909 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 MYOCDQ8IZQ8 938 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ADSSL1Q8N142 457 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 FLCNQ8NFG4 579 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 DBF4BQ8NFT6 615 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 PHOSPHO2Q8TCD6 241 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 NOC3LQ8WTT2 800 aaKnown RBP2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 BTN2A2Q8WVV5 523 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 LINC01599Q8WXQ3 324 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 KCTD13Q8WZ19 329 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 HERVK_113Q902F9 699 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 STAMQ92783 540 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ZNF669Q96BR6 464 aaPredicted RBP2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ZBTB10Q96DT7 871 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 DHTKD1Q96HY7 919 aaPredicted RBP2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 FAXDC2Q96IV6 333 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 SCLT1Q96NL6 688 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 FCRL3Q96P31 734 aaPredicted RBP2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ACCSQ96QU6 501 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 PLIN2Q99541 437 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ACO2Q99798 780 aaKnown RBP2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 GDF15Q99988 308 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 BPIFA3Q9BQP9 254 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ADPGKQ9BRR6 497 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ANP32EQ9BTT0 268 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 DHRS4Q9BTZ2 278 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 KIFC3Q9BVG8 833 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 TARS2Q9BW92 718 aaKnown RBP2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 FGFBP2Q9BYJ0 223 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 PANK2Q9BZ23 570 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 FAM49AQ9H0Q0 323 aaPredicted RBP2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 CDT1Q9H211 546 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 BLZF1Q9H2G9 400 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 PRO3102Q9H379 93 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 KCTD10Q9H3F6 313 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 PDZD7Q9H5P4 517 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ASB7Q9H672 318 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 MINDY3Q9H8M7 445 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 AGO3Q9H9G7 860 aaKnown RBP2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 RC3H2Q9HBD1 1191 aaKnown RBP2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 KIAA1586Q9HCI6 787 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 PTPRHQ9HD43 1115 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 SLC39A2Q9NP94 309 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 IL23AQ9NPF7 189 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 UBN1Q9NPG3 1134 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 AGPAT3Q9NRZ7 376 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 RGS18Q9NS28 235 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 TOPORSQ9NS56 1045 aaPredicted RBP2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 SEMA3GQ9NS98 782 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 AP5S1Q9NUS5 200 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 DMAC2Q9NW81 257 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms