RNA–Protein interactions for RNA: ENST00000516409.1

SCARNA15.2-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.2-201ENST00000516409 TMEM176AQ96HP8 235 aa3.69□□□□□ -1.82
SCARNA15.2-201ENST00000516409 SIGLEC10Q96LC7 697 aa3.69□□□□□ -1.82
SCARNA15.2-201ENST00000516409 GPR20Q99678 358 aa3.69□□□□□ -1.82
SCARNA15.2-201ENST00000516409 SDF4Q9BRK5 362 aa3.69□□□□□ -1.82
SCARNA15.2-201ENST00000516409 ABHD16BQ9H3Z7 469 aa3.69□□□□□ -1.82
SCARNA15.2-201ENST00000516409 RNPEPQ9H4A4 650 aa3.69□□□□□ -1.82
SCARNA15.2-201ENST00000516409 CXorf36Q9H7Y0 433 aa3.69□□□□□ -1.82
SCARNA15.2-201ENST00000516409 ACAD9Q9H845 621 aa3.69□□□□□ -1.82
SCARNA15.2-201ENST00000516409 PRKRIP1Q9H875 184 aaPredicted RBP3.69□□□□□ -1.82
SCARNA15.2-201ENST00000516409 GBA2Q9HCG7 927 aaPredicted RBP3.69□□□□□ -1.82
SCARNA15.2-201ENST00000516409 G6PC2Q9NQR9 355 aa3.69□□□□□ -1.82
SCARNA15.2-201ENST00000516409 POGKQ9P215 609 aa3.69□□□□□ -1.82
SCARNA15.2-201ENST00000516409 CNTN6Q9UQ52 1028 aa3.69□□□□□ -1.82
SCARNA15.2-201ENST00000516409 DNAJC16Q9Y2G8 782 aa3.69□□□□□ -1.82
SCARNA15.2-201ENST00000516409 DERAQ9Y315 318 aa3.69□□□□□ -1.82
SCARNA15.2-201ENST00000516409 RAD54BQ9Y620 910 aa3.69□□□□□ -1.82
SCARNA15.2-201ENST00000516409 OAS3Q9Y6K5 1087 aaKnown RBP3.69□□□□□ -1.82
SCARNA15.2-201ENST00000516409 CARMIL2Q6F5E8 1435 aa3.69□□□□□ -1.82
SCARNA15.2-201ENST00000516409 CCDC196A0A1B0GTZ2 297 aa3.68□□□□□ -1.82
SCARNA15.2-201ENST00000516409 CCDC78A2IDD5 438 aa3.68□□□□□ -1.82
SCARNA15.2-201ENST00000516409 BTBD11A6QL63 1104 aa3.68□□□□□ -1.82
SCARNA15.2-201ENST00000516409 AGPSO00116 658 aa3.68□□□□□ -1.82
SCARNA15.2-201ENST00000516409 SPTLC2O15270 562 aa3.68□□□□□ -1.82
SCARNA15.2-201ENST00000516409 CD3EAPO15446 510 aaKnown RBP3.68□□□□□ -1.82
SCARNA15.2-201ENST00000516409 AHCYL1O43865 530 aa3.68□□□□□ -1.82
SCARNA15.2-201ENST00000516409 B4GALT4O60513 344 aa3.68□□□□□ -1.82
SCARNA15.2-201ENST00000516409 CDC14BO60729 498 aa3.68□□□□□ -1.82
SCARNA15.2-201ENST00000516409 ZBED4O75132 1171 aa3.68□□□□□ -1.82
SCARNA15.2-201ENST00000516409 CYP21A2P08686 494 aa3.68□□□□□ -1.82
SCARNA15.2-201ENST00000516409 CNPP09543 421 aaKnown RBP3.68□□□□□ -1.82
SCARNA15.2-201ENST00000516409 HK1P19367 917 aa3.68□□□□□ -1.82
SCARNA15.2-201ENST00000516409 LRPAP1P30533 357 aa3.68□□□□□ -1.82
SCARNA15.2-201ENST00000516409 RAD52P43351 418 aa3.68□□□□□ -1.82
SCARNA15.2-201ENST00000516409 MAGEA10P43363 369 aaPredicted RBP3.68□□□□□ -1.82
SCARNA15.2-201ENST00000516409 KCNC1P48547 511 aa3.68□□□□□ -1.82
SCARNA15.2-201ENST00000516409 RBM5P52756 815 aaKnown RBP eCLIP3.68□□□□□ -1.82
SCARNA15.2-201ENST00000516409 LOXL3P58215 753 aa3.68□□□□□ -1.82
SCARNA15.2-201ENST00000516409 SATB1Q01826 763 aa3.68□□□□□ -1.82
SCARNA15.2-201ENST00000516409 GALNT2Q10471 571 aa3.68□□□□□ -1.82
SCARNA15.2-201ENST00000516409 FHL3Q13643 280 aa3.68□□□□□ -1.82
SCARNA15.2-201ENST00000516409 LRP8Q14114 963 aa3.68□□□□□ -1.82
SCARNA15.2-201ENST00000516409 SMAD1Q15797 465 aaKnown RBP3.68□□□□□ -1.82
SCARNA15.2-201ENST00000516409 TRIM60Q495X7 471 aa3.68□□□□□ -1.82
SCARNA15.2-201ENST00000516409 PDXDC1Q6P996 788 aa3.68□□□□□ -1.82
SCARNA15.2-201ENST00000516409 TMEM108Q6UXF1 575 aa3.68□□□□□ -1.82
SCARNA15.2-201ENST00000516409 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.68□□□□□ -1.82
SCARNA15.2-201ENST00000516409 KBTBD2Q8IY47 623 aa3.68□□□□□ -1.82
SCARNA15.2-201ENST00000516409 ELOA2Q8IYF1 753 aaPredicted RBP3.68□□□□□ -1.82
SCARNA15.2-201ENST00000516409 SPARTQ8N0X7 666 aa3.68□□□□□ -1.82
SCARNA15.2-201ENST00000516409 CARFQ8N187 725 aa3.68□□□□□ -1.82
SCARNA15.2-201ENST00000516409 HMGB4Q8WW32 186 aa3.68□□□□□ -1.82
SCARNA15.2-201ENST00000516409 CPT1BQ92523 772 aa3.68□□□□□ -1.82
SCARNA15.2-201ENST00000516409 RSRC1Q96IZ7 334 aaKnown RBP3.68□□□□□ -1.82
SCARNA15.2-201ENST00000516409 LCORQ96JN0 433 aaPredicted RBP3.68□□□□□ -1.82
SCARNA15.2-201ENST00000516409 ZBTB45Q96K62 511 aaPredicted RBP3.68□□□□□ -1.82
SCARNA15.2-201ENST00000516409 C7orf26Q96N11 449 aa3.68□□□□□ -1.82
SCARNA15.2-201ENST00000516409 MECRQ9BV79 373 aa3.68□□□□□ -1.82
SCARNA15.2-201ENST00000516409 UNKLQ9H9P5 680 aaKnown RBP3.68□□□□□ -1.82
SCARNA15.2-201ENST00000516409 NOD2Q9HC29 1040 aa3.68□□□□□ -1.82
SCARNA15.2-201ENST00000516409 KRT84Q9NSB2 600 aa3.68□□□□□ -1.82
SCARNA15.2-201ENST00000516409 NDUFAF4Q9P032 175 aa3.68□□□□□ -1.82
SCARNA15.2-201ENST00000516409 HSFX1Q9UBD0 423 aa3.68□□□□□ -1.82
SCARNA15.2-201ENST00000516409 PI4KBQ9UBF8 816 aa3.68□□□□□ -1.82
SCARNA15.2-201ENST00000516409 DNAJB11Q9UBS4 358 aa3.68□□□□□ -1.82
SCARNA15.2-201ENST00000516409 VPS51Q9UID3 782 aa3.68□□□□□ -1.82
SCARNA15.2-201ENST00000516409 HSF4Q9ULV5 492 aa3.68□□□□□ -1.82
SCARNA15.2-201ENST00000516409 TBX20Q9UMR3 447 aa3.68□□□□□ -1.82
SCARNA15.2-201ENST00000516409 CNPY2Q9Y2B0 182 aa3.68□□□□□ -1.82
SCARNA15.2-201ENST00000516409 AATKQ6ZMQ8 1374 aa3.67□□□□□ -1.82
SCARNA15.2-201ENST00000516409 A0A0U1RQG5 324 aaPredicted RBP3.67□□□□□ -1.82
SCARNA15.2-201ENST00000516409 CCDC195A0A1B0GUA6 201 aa3.67□□□□□ -1.82
SCARNA15.2-201ENST00000516409 SH3D21A4FU49 640 aa3.67□□□□□ -1.82
SCARNA15.2-201ENST00000516409 VWA3AA6NCI4 1184 aa3.67□□□□□ -1.82
SCARNA15.2-201ENST00000516409 C9orf118A6NHY6 69 aa3.67□□□□□ -1.82
SCARNA15.2-201ENST00000516409 FAM90A20PA6NIJ5 464 aa3.67□□□□□ -1.82
SCARNA15.2-201ENST00000516409 ADM5C9JUS6 153 aa3.67□□□□□ -1.82
SCARNA15.2-201ENST00000516409 FFAR3O14843 346 aa3.67□□□□□ -1.82
SCARNA15.2-201ENST00000516409 KLK10O43240 276 aa3.67□□□□□ -1.82
SCARNA15.2-201ENST00000516409 TMCC2O75069 709 aa3.67□□□□□ -1.82
SCARNA15.2-201ENST00000516409 TIPRLO75663 272 aa3.67□□□□□ -1.82
SCARNA15.2-201ENST00000516409 CER1O95813 267 aa3.67□□□□□ -1.82
SCARNA15.2-201ENST00000516409 SPATA31D3P0C874 917 aa3.67□□□□□ -1.82
SCARNA15.2-201ENST00000516409 CPA1P15085 419 aa3.67□□□□□ -1.82
SCARNA15.2-201ENST00000516409 GNAT2P19087 354 aa3.67□□□□□ -1.82
SCARNA15.2-201ENST00000516409 GCSHP23434 173 aa3.67□□□□□ -1.82
SCARNA15.2-201ENST00000516409 ABCD3P28288 659 aa3.67□□□□□ -1.82
SCARNA15.2-201ENST00000516409 ADORA2AP29274 412 aa3.67□□□□□ -1.82
SCARNA15.2-201ENST00000516409 MAN2A2P49641 1150 aa3.67□□□□□ -1.82
SCARNA15.2-201ENST00000516409 PGDP52209 483 aa3.67□□□□□ -1.82
SCARNA15.2-201ENST00000516409 ATXN1P54253 815 aaKnown RBP3.67□□□□□ -1.82
SCARNA15.2-201ENST00000516409 DRG2P55039 364 aaKnown RBP3.67□□□□□ -1.82
SCARNA15.2-201ENST00000516409 RAC3P60763 192 aa3.67□□□□□ -1.82
SCARNA15.2-201ENST00000516409 POU5F1Q01860 360 aaKnown RBP3.67□□□□□ -1.82
SCARNA15.2-201ENST00000516409 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.67□□□□□ -1.82
SCARNA15.2-201ENST00000516409 ZNF844Q08AG5 666 aa3.67□□□□□ -1.82
SCARNA15.2-201ENST00000516409 SF3A3Q12874 501 aaKnown RBP eCLIP3.67□□□□□ -1.82
SCARNA15.2-201ENST00000516409 ERV3-1Q14264 604 aa3.67□□□□□ -1.82
SCARNA15.2-201ENST00000516409 ANKRD1Q15327 319 aa3.67□□□□□ -1.82
SCARNA15.2-201ENST00000516409 MEA1Q16626 185 aa3.67□□□□□ -1.82
SCARNA15.2-201ENST00000516409 P3H1Q32P28 736 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms