RNA–Protein interactions for RNA: ENST00000516211.1

SCARNA17.1-201, small Cajal body-specific RNA 17, humanhuman

BASIC

Gene SCARNA17, Length 143 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA17.1-201ENST00000516211 NSUN4Q96CB9 384 aaKnown RBP3□□□□□ -1.93
SCARNA17.1-201ENST00000516211 RNF125Q96EQ8 232 aa3□□□□□ -1.93
SCARNA17.1-201ENST00000516211 NEIL1Q96FI4 390 aaPredicted RBP3□□□□□ -1.93
SCARNA17.1-201ENST00000516211 TSPAN17Q96FV3 270 aa3□□□□□ -1.93
SCARNA17.1-201ENST00000516211 CALML4Q96GE6 196 aa3□□□□□ -1.93
SCARNA17.1-201ENST00000516211 FEM1CQ96JP0 617 aa3□□□□□ -1.93
SCARNA17.1-201ENST00000516211 ASB2Q96Q27 587 aa3□□□□□ -1.93
SCARNA17.1-201ENST00000516211 GDF15Q99988 308 aa3□□□□□ -1.93
SCARNA17.1-201ENST00000516211 MS4A7Q9GZW8 240 aaPredicted RBP3□□□□□ -1.93
SCARNA17.1-201ENST00000516211 GHITMQ9H3K2 345 aa3□□□□□ -1.93
SCARNA17.1-201ENST00000516211 FAM83DQ9H4H8 585 aa3□□□□□ -1.93
SCARNA17.1-201ENST00000516211 LDAHQ9H6V9 325 aa3□□□□□ -1.93
SCARNA17.1-201ENST00000516211 ACAD9Q9H845 621 aa3□□□□□ -1.93
SCARNA17.1-201ENST00000516211 CHODLQ9H9P2 273 aa3□□□□□ -1.93
SCARNA17.1-201ENST00000516211 VEZTQ9HBM0 779 aa3□□□□□ -1.93
SCARNA17.1-201ENST00000516211 ZBTB26Q9HCK0 441 aa3□□□□□ -1.93
SCARNA17.1-201ENST00000516211 PRDM8Q9NQV8 689 aa3□□□□□ -1.93
SCARNA17.1-201ENST00000516211 TLR9Q9NR96 1032 aa3□□□□□ -1.93
SCARNA17.1-201ENST00000516211 CWC25Q9NXE8 425 aaPredicted RBP3□□□□□ -1.93
SCARNA17.1-201ENST00000516211 GPRC5DQ9NZD1 345 aa3□□□□□ -1.93
SCARNA17.1-201ENST00000516211 TBC1D29Q9UFV1 150 aa3□□□□□ -1.93
SCARNA17.1-201ENST00000516211 Q9UFV3 132 aa3□□□□□ -1.93
SCARNA17.1-201ENST00000516211 TRPS1Q9UHF7 1281 aa3□□□□□ -1.93
SCARNA17.1-201ENST00000516211 GPR160Q9UJ42 338 aa3□□□□□ -1.93
SCARNA17.1-201ENST00000516211 ISY1Q9ULR0 285 aaKnown RBP3□□□□□ -1.93
SCARNA17.1-201ENST00000516211 VWA7Q9Y334 891 aa3□□□□□ -1.93
SCARNA17.1-201ENST00000516211 SNX8Q9Y5X2 465 aa3□□□□□ -1.93
SCARNA17.1-201ENST00000516211 TROQ12816 1431 aaPredicted RBP3□□□□□ -1.93
SCARNA17.1-201ENST00000516211 RIMS2Q9UQ26 1411 aa3□□□□□ -1.93
SCARNA17.1-201ENST00000516211 CUL9Q8IWT3 2517 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 CDC42BPAQ5VT25 1732 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 PEAK1Q9H792 1746 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 ADGRL2O95490 1459 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 PRXQ9BXM0 1461 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 MBD5Q9P267 1494 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 VIRMAQ69YN4 1812 aaKnown RBP2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 A0A0A6YYK5 440 aaPredicted RBP2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 SMTNL1A8MU46 457 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 E7EVH7 732 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 H7C0S8 307 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 RBAK-RBAKDNI3L0D1 243 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 FYB1O15117 783 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 SPTLC2O15270 562 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 GRM6O15303 877 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 KCNQ3O43525 872 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 DOK2O60496 412 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 ITGA10O75578 1167 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 KRT38O76015 456 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 URI1O94763 535 aaPredicted RBP2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 ALDH1A2O94788 518 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 VIPP01282 170 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 LRG1P02750 347 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 TFRCP02786 760 aaKnown RBP2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 AMY1AP04745 511 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 GJB1P08034 283 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 CNPP09543 421 aaKnown RBP2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 GAAP10253 952 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 IL1R1P14778 569 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 PFKLP17858 780 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 BTF3P20290 206 aaKnown RBP2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 SP100P23497 879 aaPredicted RBP2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 SLC5A2P31639 672 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 UBA7P41226 1012 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 GLRBP48167 497 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 SLC11A2P49281 568 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 MEOX1P50221 254 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 PRKAA2P54646 552 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 WNT3P56703 355 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 RPP30P78346 268 aaKnown RBP2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 IL13RA1P78552 427 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 ATP8B2P98198 1209 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 ZP2Q05996 745 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 MPP3Q13368 585 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 DCTN1Q14203 1278 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 SEC23BQ15437 767 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 BAK1Q16611 211 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 KANK2Q63ZY3 851 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 KRT40Q6A162 431 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 MCTP2Q6DN12 878 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 RINT1Q6NUQ1 792 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 TMC5Q6UXY8 1006 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 Q6ZNB5 142 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 USP49Q70CQ1 688 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 RRAGAQ7L523 313 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 KDELC2Q7Z4H8 507 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 ANKS1BQ7Z6G8 1248 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 MIB1Q86YT6 1006 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 PLXDC1Q8IUK5 500 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 CCDC28AQ8IWP9 274 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 RTKN2Q8IZC4 609 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 NDUFAF2Q8N183 169 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 ZGPATQ8N5A5 531 aaKnown RBP2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 ANKRD44Q8N8A2 993 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 IL17RDQ8NFM7 739 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 OR56A3Q8NH54 315 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 GCDHQ92947 438 aaPredicted RBP2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 JAKMIP2Q96AA8 810 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 ZNF668Q96K58 619 aaPredicted RBP2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 CLIC6Q96NY7 704 aa2.99□□□□□ -1.93
SCARNA17.1-201ENST00000516211 YME1L1Q96TA2 773 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms