RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 ABCB1P08183 1280 aaPredicted RBP11.4□□□□□ -0.58
TRIM41-209ENST00000515834 MARSP56192 900 aaKnown RBP11.4□□□□□ -0.58
TRIM41-209ENST00000515834 COL23A1Q86Y22 540 aaPredicted RBP11.4□□□□□ -0.58
TRIM41-209ENST00000515834 PALB2Q86YC2 1186 aa11.4□□□□□ -0.58
TRIM41-209ENST00000515834 EME1Q96AY2 570 aa11.4□□□□□ -0.58
TRIM41-209ENST00000515834 CAMKK2Q96RR4 588 aa11.4□□□□□ -0.58
TRIM41-209ENST00000515834 APOL2Q9BQE5 337 aa11.4□□□□□ -0.58
TRIM41-209ENST00000515834 CYP4F12Q9HCS2 524 aa11.4□□□□□ -0.58
TRIM41-209ENST00000515834 SNTG2Q9NY99 539 aa11.4□□□□□ -0.58
TRIM41-209ENST00000515834 POLR1DQ9Y2S0 133 aa11.4□□□□□ -0.58
TRIM41-209ENST00000515834 TBX3O15119 743 aa11.4□□□□□ -0.58
TRIM41-209ENST00000515834 COMTP21964 271 aa11.4□□□□□ -0.58
TRIM41-209ENST00000515834 POU1F1P28069 291 aa11.4□□□□□ -0.58
TRIM41-209ENST00000515834 FEN1P39748 380 aaKnown RBP11.4□□□□□ -0.58
TRIM41-209ENST00000515834 SOHLH2Q9NX45 425 aa11.4□□□□□ -0.58
TRIM41-209ENST00000515834 SYBUQ9NX95 663 aa11.4□□□□□ -0.58
TRIM41-209ENST00000515834 IQSEC2Q5JU85 1478 aa11.4□□□□□ -0.58
TRIM41-209ENST00000515834 PREPLQ4J6C6 727 aaPredicted RBP11.4□□□□□ -0.58
TRIM41-209ENST00000515834 CEP78Q5JTW2 689 aa11.4□□□□□ -0.58
TRIM41-209ENST00000515834 TIGD7Q6NT04 549 aaPredicted RBP11.4□□□□□ -0.58
TRIM41-209ENST00000515834 NLRP14Q86W24 1093 aa11.4□□□□□ -0.58
TRIM41-209ENST00000515834 CYFIP2Q96F07 1278 aa11.4□□□□□ -0.58
TRIM41-209ENST00000515834 RIT2Q99578 217 aa11.4□□□□□ -0.58
TRIM41-209ENST00000515834 ANKEF1Q9NU02 776 aa11.4□□□□□ -0.58
TRIM41-209ENST00000515834 CYP39A1Q9NYL5 469 aa11.4□□□□□ -0.58
TRIM41-209ENST00000515834 SAMD9LQ8IVG5 1584 aa11.4□□□□□ -0.58
TRIM41-209ENST00000515834 PLA2G6O60733 806 aa11.4□□□□□ -0.59
TRIM41-209ENST00000515834 RBP3P10745 1247 aa11.4□□□□□ -0.59
TRIM41-209ENST00000515834 PCYT1AP49585 367 aa11.4□□□□□ -0.59
TRIM41-209ENST00000515834 MPZL3Q6UWV2 235 aa11.4□□□□□ -0.59
TRIM41-209ENST00000515834 KIAA1324Q6UXG2 1013 aaKnown RBP11.4□□□□□ -0.59
TRIM41-209ENST00000515834 TFAP2DQ7Z6R9 452 aa11.4□□□□□ -0.59
TRIM41-209ENST00000515834 SLFN11Q7Z7L1 901 aa11.4□□□□□ -0.59
TRIM41-209ENST00000515834 TUBGCP3Q96CW5 907 aa11.4□□□□□ -0.59
TRIM41-209ENST00000515834 FICDQ9BVA6 458 aa11.4□□□□□ -0.59
TRIM41-209ENST00000515834 ADGRE3Q9BY15 652 aa11.4□□□□□ -0.59
TRIM41-209ENST00000515834 RHBGQ9H310 441 aa11.4□□□□□ -0.59
TRIM41-209ENST00000515834 MIEF1Q9NQG6 463 aa11.4□□□□□ -0.59
TRIM41-209ENST00000515834 MCM8Q9UJA3 840 aa11.4□□□□□ -0.59
TRIM41-209ENST00000515834 TTC37Q6PGP7 1564 aa11.4□□□□□ -0.59
TRIM41-209ENST00000515834 A0A087WZ62 844 aa11.39□□□□□ -0.59
TRIM41-209ENST00000515834 MANSC4A6NHS7 340 aaPredicted RBP11.39□□□□□ -0.59
TRIM41-209ENST00000515834 STIP1P31948 543 aaKnown RBP11.39□□□□□ -0.59
TRIM41-209ENST00000515834 CUL2Q13617 745 aa11.39□□□□□ -0.59
TRIM41-209ENST00000515834 CHI3L2Q15782 390 aa11.39□□□□□ -0.59
TRIM41-209ENST00000515834 C2CD6Q53TS8 623 aa11.39□□□□□ -0.59
TRIM41-209ENST00000515834 CEP68Q76N32 757 aa11.39□□□□□ -0.59
TRIM41-209ENST00000515834 OMDQ99983 421 aa11.39□□□□□ -0.59
TRIM41-209ENST00000515834 FDXACB1Q9BRP7 624 aaPredicted RBP11.39□□□□□ -0.59
TRIM41-209ENST00000515834 PHF20Q9BVI0 1012 aa11.39□□□□□ -0.59
TRIM41-209ENST00000515834 PDGFDQ9GZP0 370 aaPredicted RBP11.39□□□□□ -0.59
TRIM41-209ENST00000515834 RPRD1BQ9NQG5 326 aaKnown RBP11.39□□□□□ -0.59
TRIM41-209ENST00000515834 IARS2Q9NSE4 1012 aaKnown RBP11.39□□□□□ -0.59
TRIM41-209ENST00000515834 SCN3BQ9NY72 215 aa11.39□□□□□ -0.59
TRIM41-209ENST00000515834 MKL2Q9ULH7 1088 aa11.39□□□□□ -0.59
TRIM41-209ENST00000515834 E9PBE3 544 aa11.39□□□□□ -0.59
TRIM41-209ENST00000515834 FNTAP49354 379 aa11.39□□□□□ -0.59
TRIM41-209ENST00000515834 E2F4Q16254 413 aa11.39□□□□□ -0.59
TRIM41-209ENST00000515834 AGAP9Q5VTM2 703 aa11.39□□□□□ -0.59
TRIM41-209ENST00000515834 ATG9AQ7Z3C6 839 aa11.39□□□□□ -0.59
TRIM41-209ENST00000515834 LPCAT1Q8NF37 534 aa11.39□□□□□ -0.59
TRIM41-209ENST00000515834 EPC1Q9H2F5 836 aa11.39□□□□□ -0.59
TRIM41-209ENST00000515834 PDGFCQ9NRA1 345 aa11.39□□□□□ -0.59
TRIM41-209ENST00000515834 DDX43Q9NXZ2 648 aaKnown RBP11.39□□□□□ -0.59
TRIM41-209ENST00000515834 SPG21Q9NZD8 308 aa11.39□□□□□ -0.59
TRIM41-209ENST00000515834 MOXD2PA6NHM9 499 aa11.39□□□□□ -0.59
TRIM41-209ENST00000515834 CAPN1P07384 714 aa11.39□□□□□ -0.59
TRIM41-209ENST00000515834 RRM2P31350 389 aa11.39□□□□□ -0.59
TRIM41-209ENST00000515834 DSG3P32926 999 aa11.39□□□□□ -0.59
TRIM41-209ENST00000515834 GLRBP48167 497 aa11.39□□□□□ -0.59
TRIM41-209ENST00000515834 KIAA2013Q8IYS2 634 aa11.39□□□□□ -0.59
TRIM41-209ENST00000515834 EDEM1Q92611 657 aa11.39□□□□□ -0.59
TRIM41-209ENST00000515834 OSBPL1AQ9BXW6 950 aa11.39□□□□□ -0.59
TRIM41-209ENST00000515834 FBXO2Q9UK22 296 aaPredicted RBP11.39□□□□□ -0.59
TRIM41-209ENST00000515834 ADM5C9JUS6 153 aa11.39□□□□□ -0.59
TRIM41-209ENST00000515834 HNRNPRO43390 633 aaKnown RBP11.39□□□□□ -0.59
TRIM41-209ENST00000515834 FBXO38Q6PIJ6 1188 aa11.39□□□□□ -0.59
TRIM41-209ENST00000515834 TPGS1Q6ZTW0 290 aa11.39□□□□□ -0.59
TRIM41-209ENST00000515834 UNC45BQ8IWX7 931 aa11.39□□□□□ -0.59
TRIM41-209ENST00000515834 ATP6V1G3Q96LB4 118 aa11.39□□□□□ -0.59
TRIM41-209ENST00000515834 THTPAQ9BU02 230 aa11.39□□□□□ -0.59
TRIM41-209ENST00000515834 UBP1Q9NZI7 540 aa11.39□□□□□ -0.59
TRIM41-209ENST00000515834 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.39□□□□□ -0.59
TRIM41-209ENST00000515834 TBC1D3BA6NDS4 549 aa11.39□□□□□ -0.59
TRIM41-209ENST00000515834 KLK7P49862 253 aa11.39□□□□□ -0.59
TRIM41-209ENST00000515834 SBK1Q52WX2 424 aa11.39□□□□□ -0.59
TRIM41-209ENST00000515834 TRAPPC11Q7Z392 1133 aa11.39□□□□□ -0.59
TRIM41-209ENST00000515834 MYCBPQ99417 103 aaPredicted RBP11.39□□□□□ -0.59
TRIM41-209ENST00000515834 ATP6V1HQ9UI12 483 aa11.39□□□□□ -0.59
TRIM41-209ENST00000515834 SHROOM2Q13796 1616 aa11.39□□□□□ -0.59
TRIM41-209ENST00000515834 C16orf96A6NNT2 1141 aa11.39□□□□□ -0.59
TRIM41-209ENST00000515834 LHX1P48742 406 aa11.39□□□□□ -0.59
TRIM41-209ENST00000515834 KCNT1Q5JUK3 1230 aa11.39□□□□□ -0.59
TRIM41-209ENST00000515834 NRKQ7Z2Y5 1582 aa11.39□□□□□ -0.59
TRIM41-209ENST00000515834 CENPLQ8N0S6 344 aaPredicted RBP11.39□□□□□ -0.59
TRIM41-209ENST00000515834 CYP4X1Q8N118 509 aa11.39□□□□□ -0.59
TRIM41-209ENST00000515834 AKT1S1Q96B36 256 aa11.39□□□□□ -0.59
TRIM41-209ENST00000515834 C7orf25Q9BPX7 421 aa11.39□□□□□ -0.59
TRIM41-209ENST00000515834 AAR2Q9Y312 384 aaKnown RBP11.39□□□□□ -0.59
TRIM41-209ENST00000515834 GAS2O43903 313 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms