RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 ZMIZ2Q8NF64 920 aa13.54□□□□□ -0.24
CLCN3-210ENST00000515420 PRSS33Q8NF86 280 aa13.54□□□□□ -0.24
CLCN3-210ENST00000515420 CSGALNACT1Q8TDX6 532 aa13.54□□□□□ -0.24
CLCN3-210ENST00000515420 TATDN2Q93075 761 aa13.54□□□□□ -0.24
CLCN3-210ENST00000515420 CYFIP2Q96F07 1278 aa13.54□□□□□ -0.24
CLCN3-210ENST00000515420 LRRC3BQ96PB8 259 aa13.54□□□□□ -0.24
CLCN3-210ENST00000515420 KCNK16Q96T55 309 aa13.54□□□□□ -0.24
CLCN3-210ENST00000515420 SMOQ99835 787 aa13.54□□□□□ -0.24
CLCN3-210ENST00000515420 FBXO44Q9H4M3 255 aa13.54□□□□□ -0.24
CLCN3-210ENST00000515420 C8orf33Q9H7E9 229 aaPredicted RBP13.54□□□□□ -0.24
CLCN3-210ENST00000515420 LTB4R2Q9NPC1 389 aa13.54□□□□□ -0.24
CLCN3-210ENST00000515420 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.54□□□□□ -0.242e-6■■■■■ 41.9
CLCN3-210ENST00000515420 FAM49BQ9NUQ9 324 aa13.54□□□□□ -0.24
CLCN3-210ENST00000515420 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.54□□□□□ -0.24
CLCN3-210ENST00000515420 CACNA1HO95180 2353 aa13.54□□□□□ -0.24
CLCN3-210ENST00000515420 MYO16Q9Y6X6 1858 aa13.54□□□□□ -0.24
CLCN3-210ENST00000515420 C2orf78A6NCI8 922 aa13.53□□□□□ -0.24
CLCN3-210ENST00000515420 NCAM2O15394 837 aa13.53□□□□□ -0.24
CLCN3-210ENST00000515420 PI15O43692 258 aa13.53□□□□□ -0.24
CLCN3-210ENST00000515420 OAS1P00973 400 aaKnown RBP13.53□□□□□ -0.24
CLCN3-210ENST00000515420 AFPP02771 609 aaKnown RBP13.53□□□□□ -0.24
CLCN3-210ENST00000515420 CKMP06732 381 aa13.53□□□□□ -0.24
CLCN3-210ENST00000515420 PRKCSHP14314 528 aaPredicted RBP13.53□□□□□ -0.24
CLCN3-210ENST00000515420 ERCC5P28715 1186 aaPredicted RBP13.53□□□□□ -0.24
CLCN3-210ENST00000515420 PLA2G5P39877 138 aa13.53□□□□□ -0.24
CLCN3-210ENST00000515420 GCNT1Q02742 428 aa13.53□□□□□ -0.24
CLCN3-210ENST00000515420 KCNH2Q12809 1159 aa13.53□□□□□ -0.24
CLCN3-210ENST00000515420 TAF10Q12962 218 aa13.53□□□□□ -0.24
CLCN3-210ENST00000515420 ORC1Q13415 861 aa13.53□□□□□ -0.24
CLCN3-210ENST00000515420 SMYD5Q6GMV2 418 aa13.53□□□□□ -0.24
CLCN3-210ENST00000515420 RBM43Q6ZSC3 357 aaKnown RBP13.53□□□□□ -0.24
CLCN3-210ENST00000515420 CLEC20AQ6ZU45 233 aa13.53□□□□□ -0.24
CLCN3-210ENST00000515420 UBR7Q8N806 425 aa13.53□□□□□ -0.24
CLCN3-210ENST00000515420 SLC4A11Q8NBS3 891 aa13.53□□□□□ -0.24
CLCN3-210ENST00000515420 LMO3Q8TAP4 145 aa13.53□□□□□ -0.24
CLCN3-210ENST00000515420 FBXO32Q969P5 355 aa13.53□□□□□ -0.24
CLCN3-210ENST00000515420 TMEM176AQ96HP8 235 aa13.53□□□□□ -0.24
CLCN3-210ENST00000515420 NT5C1BQ96P26 610 aa13.53□□□□□ -0.24
CLCN3-210ENST00000515420 ARID3AQ99856 593 aa13.53□□□□□ -0.24
CLCN3-210ENST00000515420 TRPC7Q9HCX4 862 aa13.53□□□□□ -0.24
CLCN3-210ENST00000515420 DLGAP2Q9P1A6 1054 aa13.53□□□□□ -0.24
CLCN3-210ENST00000515420 ARHGAP26Q9UNA1 814 aa13.53□□□□□ -0.24
CLCN3-210ENST00000515420 CCL26Q9Y258 94 aa13.53□□□□□ -0.24
CLCN3-210ENST00000515420 SHISA7A6NL88 538 aa13.52□□□□□ -0.25
CLCN3-210ENST00000515420 ZDHHC11BP0C7U3 371 aa13.52□□□□□ -0.25
CLCN3-210ENST00000515420 HDCP19113 662 aa13.52□□□□□ -0.25
CLCN3-210ENST00000515420 ADORA2BP29275 332 aa13.52□□□□□ -0.25
CLCN3-210ENST00000515420 RPS9P46781 194 aaKnown RBP13.52□□□□□ -0.25
CLCN3-210ENST00000515420 RAD23BP54727 409 aa13.52□□□□□ -0.25
CLCN3-210ENST00000515420 MAP3K7CLP57077 242 aa13.52□□□□□ -0.25
CLCN3-210ENST00000515420 SLC7A9P82251 487 aa13.52□□□□□ -0.25
CLCN3-210ENST00000515420 TCF15Q12870 199 aa13.52□□□□□ -0.25
CLCN3-210ENST00000515420 ZNF77Q15935 545 aa13.52□□□□□ -0.25
CLCN3-210ENST00000515420 PPP1R26Q5T8A7 1209 aaPredicted RBP13.52□□□□□ -0.25
CLCN3-210ENST00000515420 ARHGAP17Q68EM7 881 aa13.52□□□□□ -0.25
CLCN3-210ENST00000515420 CC2D1AQ6P1N0 951 aaPredicted RBP13.52□□□□□ -0.25
CLCN3-210ENST00000515420 RALGPS2Q86X27 583 aaPredicted RBP13.52□□□□□ -0.25
CLCN3-210ENST00000515420 DDX42Q86XP3 938 aaKnown RBP eCLIP13.52□□□□□ -0.25
CLCN3-210ENST00000515420 ARL14EPQ8N8R7 260 aaPredicted RBP13.52□□□□□ -0.25
CLCN3-210ENST00000515420 DTWD2Q8NBA8 298 aa13.52□□□□□ -0.25
CLCN3-210ENST00000515420 CLDN23Q96B33 292 aa13.52□□□□□ -0.25
CLCN3-210ENST00000515420 CNOT6LQ96LI5 555 aaKnown RBP13.52□□□□□ -0.25
CLCN3-210ENST00000515420 HEXIM2Q96MH2 286 aaKnown RBP13.52□□□□□ -0.25
CLCN3-210ENST00000515420 MED15Q96RN5 788 aa13.52□□□□□ -0.25
CLCN3-210ENST00000515420 SLC22A12Q96S37 553 aa13.52□□□□□ -0.25
CLCN3-210ENST00000515420 FAM83CQ9BQN1 747 aa13.52□□□□□ -0.25
CLCN3-210ENST00000515420 IER2Q9BTL4 223 aa13.52□□□□□ -0.25
CLCN3-210ENST00000515420 DUSP16Q9BY84 665 aa13.52□□□□□ -0.25
CLCN3-210ENST00000515420 UBXN6Q9BZV1 441 aa13.52□□□□□ -0.25
CLCN3-210ENST00000515420 FOXQ1Q9C009 403 aa13.52□□□□□ -0.25
CLCN3-210ENST00000515420 SMG9Q9H0W8 520 aaKnown RBP13.52□□□□□ -0.25
CLCN3-210ENST00000515420 THAP9Q9H5L6 903 aa13.52□□□□□ -0.25
CLCN3-210ENST00000515420 KIAA1257Q9ULG3 409 aa13.52□□□□□ -0.25
CLCN3-210ENST00000515420 PIAS3Q9Y6X2 628 aa13.52□□□□□ -0.25
CLCN3-210ENST00000515420 COL4A3Q01955 1670 aa13.51□□□□□ -0.25
CLCN3-210ENST00000515420 HHLA1C9JL84 531 aa13.51□□□□□ -0.25
CLCN3-210ENST00000515420 BEST1O76090 585 aa13.51□□□□□ -0.25
CLCN3-210ENST00000515420 MBD3O95983 291 aa13.51□□□□□ -0.25
CLCN3-210ENST00000515420 PAEPP09466 180 aa13.51□□□□□ -0.25
CLCN3-210ENST00000515420 SLC8A3P57103 927 aa13.51□□□□□ -0.25
CLCN3-210ENST00000515420 MTF1Q14872 753 aa13.51□□□□□ -0.25
CLCN3-210ENST00000515420 UBXN2BQ14CS0 331 aa13.51□□□□□ -0.25
CLCN3-210ENST00000515420 PDGFRLQ15198 375 aa13.51□□□□□ -0.25
CLCN3-210ENST00000515420 ITPRIPL2Q3MIP1 535 aa13.51□□□□□ -0.25
CLCN3-210ENST00000515420 DPCR1Q3MIW9 517 aa13.51□□□□□ -0.25
CLCN3-210ENST00000515420 ZNF394Q53GI3 561 aa13.51□□□□□ -0.25
CLCN3-210ENST00000515420 FAM114A1Q8IWE2 563 aa13.51□□□□□ -0.25
CLCN3-210ENST00000515420 EHBP1Q8NDI1 1231 aa13.51□□□□□ -0.25
CLCN3-210ENST00000515420 SCAMP5Q8TAC9 235 aa13.51□□□□□ -0.25
CLCN3-210ENST00000515420 JAKMIP2Q96AA8 810 aa13.51□□□□□ -0.25
CLCN3-210ENST00000515420 FAM122AQ96E09 287 aa13.51□□□□□ -0.25
CLCN3-210ENST00000515420 FAM81BQ96LP2 452 aa13.51□□□□□ -0.25
CLCN3-210ENST00000515420 CYP2S1Q96SQ9 504 aa13.51□□□□□ -0.25
CLCN3-210ENST00000515420 GTPBP10A4D1E9 387 aaKnown RBP13.5□□□□□ -0.25
CLCN3-210ENST00000515420 FAM170BA6NMN3 283 aa13.5□□□□□ -0.25
CLCN3-210ENST00000515420 TARSP26639 723 aaKnown RBP13.5□□□□□ -0.25
CLCN3-210ENST00000515420 CTHP32929 405 aa13.5□□□□□ -0.25
CLCN3-210ENST00000515420 KPNA1P52294 538 aaPredicted RBP13.5□□□□□ -0.25
CLCN3-210ENST00000515420 NHLH1Q02575 133 aa13.5□□□□□ -0.25
CLCN3-210ENST00000515420 IFRD2Q12894 506 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms