RNA–Protein interactions for RNA: ENST00000513588.5

CTNND2-215, Transcript of catenin delta 2, humanhuman

TSL 1 (best)

Gene CTNND2, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2-215ENST00000513588 EFCAB12Q6NXP0 572 aa11.96□□□□□ -0.49
CTNND2-215ENST00000513588 POLNQ7Z5Q5 900 aa11.96□□□□□ -0.49
CTNND2-215ENST00000513588 APOBEC3FQ8IUX4 373 aaKnown RBP11.96□□□□□ -0.49
CTNND2-215ENST00000513588 CDKL3Q8IVW4 592 aaPredicted RBP11.96□□□□□ -0.49
CTNND2-215ENST00000513588 UNC45BQ8IWX7 931 aa11.96□□□□□ -0.49
CTNND2-215ENST00000513588 RXFP2Q8WXD0 754 aa11.96□□□□□ -0.49
CTNND2-215ENST00000513588 HPDLQ96IR7 371 aa11.96□□□□□ -0.49
CTNND2-215ENST00000513588 VPS11Q9H270 941 aa11.96□□□□□ -0.49
CTNND2-215ENST00000513588 LRMDAQ9H2I8 198 aa11.96□□□□□ -0.49
CTNND2-215ENST00000513588 ZNF541Q9H0D2 1346 aa11.96□□□□□ -0.49
CTNND2-215ENST00000513588 CAPN9O14815 690 aa11.96□□□□□ -0.49
CTNND2-215ENST00000513588 NCF2P19878 526 aaPredicted RBP11.96□□□□□ -0.49
CTNND2-215ENST00000513588 UBA1P22314 1058 aaKnown RBP11.96□□□□□ -0.49
CTNND2-215ENST00000513588 SERPINB6P35237 376 aa11.96□□□□□ -0.49
CTNND2-215ENST00000513588 ANKRD22Q5VYY1 191 aa11.96□□□□□ -0.49
CTNND2-215ENST00000513588 TDRPQ86YL5 185 aa11.96□□□□□ -0.49
CTNND2-215ENST00000513588 CNPY3Q9BT09 278 aa11.96□□□□□ -0.49
CTNND2-215ENST00000513588 SMYD3Q9H7B4 428 aa11.96□□□□□ -0.49
CTNND2-215ENST00000513588 FAM49BQ9NUQ9 324 aa11.96□□□□□ -0.49
CTNND2-215ENST00000513588 SLC17A7Q9P2U7 560 aa11.96□□□□□ -0.49
CTNND2-215ENST00000513588 MAGED2Q9UNF1 606 aaPredicted RBP11.96□□□□□ -0.49
CTNND2-215ENST00000513588 APOBEC2Q9Y235 224 aaKnown RBP11.96□□□□□ -0.49
CTNND2-215ENST00000513588 SERPINB4P48594 390 aa11.96□□□□□ -0.5
CTNND2-215ENST00000513588 BMPR2Q13873 1038 aa11.96□□□□□ -0.5
CTNND2-215ENST00000513588 PARP6Q2NL67 630 aa11.96□□□□□ -0.5
CTNND2-215ENST00000513588 WASHC2DQ5SRD0 308 aa11.96□□□□□ -0.5
CTNND2-215ENST00000513588 FAM13CQ8NE31 585 aa11.96□□□□□ -0.5
CTNND2-215ENST00000513588 HIPK4Q8NE63 616 aa11.96□□□□□ -0.5
CTNND2-215ENST00000513588 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.96□□□□□ -0.5
CTNND2-215ENST00000513588 CPT1BQ92523 772 aa11.96□□□□□ -0.5
CTNND2-215ENST00000513588 KIF12Q96FN5 646 aa11.96□□□□□ -0.5
CTNND2-215ENST00000513588 TSC22D3Q99576 134 aa11.96□□□□□ -0.5
CTNND2-215ENST00000513588 THTPAQ9BU02 230 aa11.96□□□□□ -0.5
CTNND2-215ENST00000513588 DHX33Q9H6R0 707 aaKnown RBP11.96□□□□□ -0.5
CTNND2-215ENST00000513588 SAR1AQ9NR31 198 aa11.96□□□□□ -0.5
CTNND2-215ENST00000513588 C2CD2LO14523 706 aa11.95□□□□□ -0.5
CTNND2-215ENST00000513588 LRCH4O75427 683 aa11.95□□□□□ -0.5
CTNND2-215ENST00000513588 STX3Q13277 289 aa11.95□□□□□ -0.5
CTNND2-215ENST00000513588 THOC5Q13769 683 aaKnown RBP11.95□□□□□ -0.5
CTNND2-215ENST00000513588 TMEM132DQ14C87 1099 aa11.95□□□□□ -0.5
CTNND2-215ENST00000513588 LY6KQ17RY6 165 aa11.95□□□□□ -0.5
CTNND2-215ENST00000513588 DRICH1Q6PGQ1 229 aaPredicted RBP11.95□□□□□ -0.5
CTNND2-215ENST00000513588 NPNTQ6UXI9 565 aa11.95□□□□□ -0.5
CTNND2-215ENST00000513588 TAS1R3Q7RTX0 852 aa11.95□□□□□ -0.5
CTNND2-215ENST00000513588 CCDC33Q8N5R6 958 aa11.95□□□□□ -0.5
CTNND2-215ENST00000513588 CEP120Q8N960 986 aa11.95□□□□□ -0.5
CTNND2-215ENST00000513588 DNERQ8NFT8 737 aa11.95□□□□□ -0.5
CTNND2-215ENST00000513588 TRAPPC12Q8WVT3 735 aa11.95□□□□□ -0.5
CTNND2-215ENST00000513588 TMEM176AQ96HP8 235 aa11.95□□□□□ -0.5
CTNND2-215ENST00000513588 APOPT1Q96IL0 206 aa11.95□□□□□ -0.5
CTNND2-215ENST00000513588 NT5C1AQ9BXI3 368 aa11.95□□□□□ -0.5
CTNND2-215ENST00000513588 ARMCX1Q9P291 453 aa11.95□□□□□ -0.5
CTNND2-215ENST00000513588 SMCHD1A6NHR9 2005 aa11.95□□□□□ -0.5
CTNND2-215ENST00000513588 NRAPQ86VF7 1730 aa11.95□□□□□ -0.5
CTNND2-215ENST00000513588 TXNP10599 105 aaKnown RBP11.95□□□□□ -0.5
CTNND2-215ENST00000513588 SAT1P21673 171 aa11.95□□□□□ -0.5
CTNND2-215ENST00000513588 VHLP40337 213 aa11.95□□□□□ -0.5
CTNND2-215ENST00000513588 GARSP41250 739 aaKnown RBP11.95□□□□□ -0.5
CTNND2-215ENST00000513588 EPHB1P54762 984 aa11.95□□□□□ -0.5
CTNND2-215ENST00000513588 SESN2P58004 480 aaPredicted RBP11.95□□□□□ -0.5
CTNND2-215ENST00000513588 ENPEPQ07075 957 aa11.95□□□□□ -0.5
CTNND2-215ENST00000513588 RASA2Q15283 850 aa11.95□□□□□ -0.5
CTNND2-215ENST00000513588 BOLA3Q53S33 107 aa11.95□□□□□ -0.5
CTNND2-215ENST00000513588 FNBP1LQ5T0N5 605 aa11.95□□□□□ -0.5
CTNND2-215ENST00000513588 RASIP1Q5U651 963 aa11.95□□□□□ -0.5
CTNND2-215ENST00000513588 BZW1Q7L1Q6 419 aaKnown RBP11.95□□□□□ -0.5
CTNND2-215ENST00000513588 TEX9Q8N6V9 391 aa11.95□□□□□ -0.5
CTNND2-215ENST00000513588 TFAP2BQ92481 460 aa11.95□□□□□ -0.5
CTNND2-215ENST00000513588 SRPK1Q96SB4 655 aaKnown RBP11.95□□□□□ -0.5
CTNND2-215ENST00000513588 BTBD10Q9BSF8 475 aa11.95□□□□□ -0.5
CTNND2-215ENST00000513588 TTLL3Q9Y4R7 772 aa11.95□□□□□ -0.5
CTNND2-215ENST00000513588 SNX9Q9Y5X1 595 aa11.95□□□□□ -0.5
CTNND2-215ENST00000513588 ALADP13716 330 aa11.95□□□□□ -0.5
CTNND2-215ENST00000513588 RPS12P25398 132 aaKnown RBP11.95□□□□□ -0.5
CTNND2-215ENST00000513588 HIRAP54198 1017 aaPredicted RBP11.95□□□□□ -0.5
CTNND2-215ENST00000513588 MMRN1Q13201 1228 aa11.95□□□□□ -0.5
CTNND2-215ENST00000513588 EFHC2Q5JST6 749 aa11.95□□□□□ -0.5
CTNND2-215ENST00000513588 DNAAF3Q8N9W5 541 aa11.95□□□□□ -0.5
CTNND2-215ENST00000513588 GMLQ99445 158 aa11.95□□□□□ -0.5
CTNND2-215ENST00000513588 CCDC160A6NGH7 325 aa11.94□□□□□ -0.5
CTNND2-215ENST00000513588 FCHO1O14526 889 aa11.94□□□□□ -0.5
CTNND2-215ENST00000513588 GAS2O43903 313 aaKnown RBP11.94□□□□□ -0.5
CTNND2-215ENST00000513588 BAG6P46379 1132 aa11.94□□□□□ -0.5
CTNND2-215ENST00000513588 MRPS35P82673 323 aaKnown RBP11.94□□□□□ -0.5
CTNND2-215ENST00000513588 RBP5P82980 135 aa11.94□□□□□ -0.5
CTNND2-215ENST00000513588 TMEM154Q6P9G4 183 aa11.94□□□□□ -0.5
CTNND2-215ENST00000513588 METTL7BQ6UX53 244 aa11.94□□□□□ -0.5
CTNND2-215ENST00000513588 FRMD8Q9BZ67 464 aaPredicted RBP11.94□□□□□ -0.5
CTNND2-215ENST00000513588 FBXO6Q9NRD1 293 aaPredicted RBP11.94□□□□□ -0.5
CTNND2-215ENST00000513588 GGA3Q9NZ52 723 aa11.94□□□□□ -0.5
CTNND2-215ENST00000513588 IRF6O14896 467 aa11.94□□□□□ -0.5
CTNND2-215ENST00000513588 OPHN1O60890 802 aa11.94□□□□□ -0.5
CTNND2-215ENST00000513588 MICAL2O94851 1124 aa11.94□□□□□ -0.5
CTNND2-215ENST00000513588 VDRP11473 427 aa11.94□□□□□ -0.5
CTNND2-215ENST00000513588 ARL2P36404 184 aa11.94□□□□□ -0.5
CTNND2-215ENST00000513588 GDF10P55107 478 aa11.94□□□□□ -0.5
CTNND2-215ENST00000513588 CLNKQ7Z7G1 428 aa11.94□□□□□ -0.5
CTNND2-215ENST00000513588 PRPF39Q86UA1 669 aaKnown RBP11.94□□□□□ -0.5
CTNND2-215ENST00000513588 SULF1Q8IWU6 871 aa11.94□□□□□ -0.5
CTNND2-215ENST00000513588 TTC8Q8TAM2 541 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms