RNA–Protein interactions for RNA: ENST00000513506.5

POLR2J3-218, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-218ENST00000513506 SLC47A2Q86VL8 602 aa16.41■□□□□ 0.22
POLR2J3-218ENST00000513506 HS6ST3Q8IZP7 471 aa16.41■□□□□ 0.22
POLR2J3-218ENST00000513506 SHKBP1Q8TBC3 707 aa16.41■□□□□ 0.22
POLR2J3-218ENST00000513506 EPS8L1Q8TE68 723 aa16.41■□□□□ 0.22
POLR2J3-218ENST00000513506 SYN2Q92777 582 aaPredicted RBP16.41■□□□□ 0.22
POLR2J3-218ENST00000513506 FBXO44Q9H4M3 255 aa16.41■□□□□ 0.22
POLR2J3-218ENST00000513506 TRPV4Q9HBA0 871 aa16.41■□□□□ 0.22
POLR2J3-218ENST00000513506 ACP6Q9NPH0 428 aa16.41■□□□□ 0.22
POLR2J3-218ENST00000513506 AIPL1Q9NZN9 384 aa16.41■□□□□ 0.22
POLR2J3-218ENST00000513506 NOCTQ9UK39 431 aaKnown RBP16.41■□□□□ 0.22
POLR2J3-218ENST00000513506 CDH7Q9ULB5 785 aa16.41■□□□□ 0.22
POLR2J3-218ENST00000513506 SCML2Q9UQR0 700 aa16.41■□□□□ 0.22
POLR2J3-218ENST00000513506 DENND4AQ7Z401 1863 aa16.4■□□□□ 0.22
POLR2J3-218ENST00000513506 NRG2O14511 850 aaPredicted RBP16.4■□□□□ 0.22
POLR2J3-218ENST00000513506 AP5Z1O43299 807 aa16.4■□□□□ 0.22
POLR2J3-218ENST00000513506 DDX6P26196 483 aaKnown RBP eCLIP16.4■□□□□ 0.22
POLR2J3-218ENST00000513506 CDR1P51861 262 aa16.4■□□□□ 0.22
POLR2J3-218ENST00000513506 POTEHQ6S545 545 aa16.4■□□□□ 0.22
POLR2J3-218ENST00000513506 PDZD4Q76G19 769 aaPredicted RBP16.4■□□□□ 0.22
POLR2J3-218ENST00000513506 IRF2BP2Q7Z5L9 587 aa16.4■□□□□ 0.22
POLR2J3-218ENST00000513506 PIGZQ86VD9 579 aa16.4■□□□□ 0.22
POLR2J3-218ENST00000513506 NPAS3Q8IXF0 933 aa16.4■□□□□ 0.22
POLR2J3-218ENST00000513506 PLCD3Q8N3E9 789 aa16.4■□□□□ 0.22
POLR2J3-218ENST00000513506 ITFG1Q8TB96 612 aa16.4■□□□□ 0.22
POLR2J3-218ENST00000513506 GPR152Q8TDT2 470 aa16.4■□□□□ 0.22
POLR2J3-218ENST00000513506 FGF13Q92913 245 aa16.4■□□□□ 0.22
POLR2J3-218ENST00000513506 TCEAL4Q96EI5 215 aa16.4■□□□□ 0.22
POLR2J3-218ENST00000513506 SPAG5Q96R06 1193 aa16.4■□□□□ 0.22
POLR2J3-218ENST00000513506 SYT11Q9BT88 431 aa16.4■□□□□ 0.22
POLR2J3-218ENST00000513506 NUCKS1Q9H1E3 243 aaKnown RBP16.4■□□□□ 0.22
POLR2J3-218ENST00000513506 NLRC4Q9NPP4 1024 aa16.4■□□□□ 0.22
POLR2J3-218ENST00000513506 CAPN11Q9UMQ6 739 aa16.4■□□□□ 0.22
POLR2J3-218ENST00000513506 MRPS23Q9Y3D9 190 aaKnown RBP16.4■□□□□ 0.22
POLR2J3-218ENST00000513506 NR2E1Q9Y466 385 aa16.4■□□□□ 0.22
POLR2J3-218ENST00000513506 VCANP13611 3396 aa16.39■□□□□ 0.21
POLR2J3-218ENST00000513506 TADA3O75528 432 aa16.39■□□□□ 0.21
POLR2J3-218ENST00000513506 GABBR2O75899 941 aa16.39■□□□□ 0.21
POLR2J3-218ENST00000513506 PNMA6AP0CW24 399 aaPredicted RBP16.39■□□□□ 0.21
POLR2J3-218ENST00000513506 LAMP2P13473 410 aa16.39■□□□□ 0.21
POLR2J3-218ENST00000513506 YWHAQP27348 245 aa16.39■□□□□ 0.21
POLR2J3-218ENST00000513506 HNRNPH3P31942 346 aaKnown RBP16.39■□□□□ 0.21
POLR2J3-218ENST00000513506 PRKCIP41743 596 aa16.39■□□□□ 0.21
POLR2J3-218ENST00000513506 SPECC1LQ69YQ0 1117 aa16.39■□□□□ 0.21
POLR2J3-218ENST00000513506 CCDC186Q7Z3E2 898 aa16.39■□□□□ 0.21
POLR2J3-218ENST00000513506 TMEM110Q86TL2 294 aa16.39■□□□□ 0.21
POLR2J3-218ENST00000513506 VSTM4Q8IW00 320 aa16.39■□□□□ 0.21
POLR2J3-218ENST00000513506 WDTC1Q8N5D0 677 aa16.39■□□□□ 0.21
POLR2J3-218ENST00000513506 PDZD8Q8NEN9 1154 aa16.39■□□□□ 0.21
POLR2J3-218ENST00000513506 SCAMP5Q8TAC9 235 aa16.39■□□□□ 0.21
POLR2J3-218ENST00000513506 NXPE3Q969Y0 559 aa16.39■□□□□ 0.21
POLR2J3-218ENST00000513506 PCMTD1Q96MG8 357 aaPredicted RBP16.39■□□□□ 0.21
POLR2J3-218ENST00000513506 MYADMQ96S97 322 aa16.39■□□□□ 0.21
POLR2J3-218ENST00000513506 SLC4A5Q9BY07 1137 aa16.39■□□□□ 0.21
POLR2J3-218ENST00000513506 C2orf16Q68DN1 1984 aa16.38■□□□□ 0.21
POLR2J3-218ENST00000513506 ZNF840PA6NDX5 716 aa16.38■□□□□ 0.21
POLR2J3-218ENST00000513506 ANHXE9PGG2 379 aa16.38■□□□□ 0.21
POLR2J3-218ENST00000513506 TULP2O00295 520 aa16.38■□□□□ 0.21
POLR2J3-218ENST00000513506 THAP12O43422 761 aa16.38■□□□□ 0.21
POLR2J3-218ENST00000513506 LSM8O95777 96 aaKnown RBP16.38■□□□□ 0.21
POLR2J3-218ENST00000513506 OLFM2O95897 454 aa16.38■□□□□ 0.21
POLR2J3-218ENST00000513506 CALCAP01258 141 aa16.38■□□□□ 0.21
POLR2J3-218ENST00000513506 CCDC172P0C7W6 258 aa16.38■□□□□ 0.21
POLR2J3-218ENST00000513506 GABRR2P28476 465 aa16.38■□□□□ 0.21
POLR2J3-218ENST00000513506 USP8P40818 1118 aa16.38■□□□□ 0.21
POLR2J3-218ENST00000513506 TUBP50607 506 aa16.38■□□□□ 0.21
POLR2J3-218ENST00000513506 ZBED6P86452 979 aa16.38■□□□□ 0.21
POLR2J3-218ENST00000513506 CDR2Q01850 454 aa16.38■□□□□ 0.21
POLR2J3-218ENST00000513506 TAF12Q16514 161 aa16.38■□□□□ 0.21
POLR2J3-218ENST00000513506 PMF1Q6P1K2 205 aa16.38■□□□□ 0.21
POLR2J3-218ENST00000513506 DENND1BQ6P3S1 775 aa16.38■□□□□ 0.21
POLR2J3-218ENST00000513506 GPRIN1Q7Z2K8 1008 aa16.38■□□□□ 0.21
POLR2J3-218ENST00000513506 CACNA2D4Q7Z3S7 1137 aa16.38■□□□□ 0.21
POLR2J3-218ENST00000513506 NOP9Q86U38 636 aaKnown RBP16.38■□□□□ 0.21
POLR2J3-218ENST00000513506 MON1AQ86VX9 555 aa16.38■□□□□ 0.21
POLR2J3-218ENST00000513506 ACSF2Q96CM8 615 aaPredicted RBP16.38■□□□□ 0.21
POLR2J3-218ENST00000513506 MRFAP1L1Q96HT8 127 aa16.38■□□□□ 0.21
POLR2J3-218ENST00000513506 TASP1Q9H6P5 420 aa16.38■□□□□ 0.21
POLR2J3-218ENST00000513506 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.38■□□□□ 0.21
POLR2J3-218ENST00000513506 M0QYV0 167 aa16.37■□□□□ 0.21
POLR2J3-218ENST00000513506 GFPT2O94808 682 aa16.37■□□□□ 0.21
POLR2J3-218ENST00000513506 GYPCP04921 128 aa16.37■□□□□ 0.21
POLR2J3-218ENST00000513506 CFHP08603 1231 aa16.37■□□□□ 0.21
POLR2J3-218ENST00000513506 MYL4P12829 197 aa16.37■□□□□ 0.21
POLR2J3-218ENST00000513506 FERP16591 822 aa16.37■□□□□ 0.21
POLR2J3-218ENST00000513506 CEBPBP17676 345 aa16.37■□□□□ 0.21
POLR2J3-218ENST00000513506 CHRNB2P17787 502 aa16.37■□□□□ 0.21
POLR2J3-218ENST00000513506 TAF10Q12962 218 aa16.37■□□□□ 0.21
POLR2J3-218ENST00000513506 TRIM14Q14142 442 aa16.37■□□□□ 0.21
POLR2J3-218ENST00000513506 BHLHA9Q7RTU4 235 aa16.37■□□□□ 0.21
POLR2J3-218ENST00000513506 KIAA1958Q8N8K9 716 aa16.37■□□□□ 0.21
POLR2J3-218ENST00000513506 OLIG1Q8TAK6 271 aa16.37■□□□□ 0.21
POLR2J3-218ENST00000513506 UBA3Q8TBC4 463 aa16.37■□□□□ 0.21
POLR2J3-218ENST00000513506 SECISBP2LQ93073 1101 aaKnown RBP16.37■□□□□ 0.21
POLR2J3-218ENST00000513506 SLITRK1Q96PX8 696 aa16.37■□□□□ 0.21
POLR2J3-218ENST00000513506 CNGB3Q9NQW8 809 aa16.37■□□□□ 0.21
POLR2J3-218ENST00000513506 CLIC5Q9NZA1 410 aa16.37■□□□□ 0.21
POLR2J3-218ENST00000513506 TRPM5Q9NZQ8 1165 aa16.37■□□□□ 0.21
POLR2J3-218ENST00000513506 CYTH4Q9UIA0 394 aa16.37■□□□□ 0.21
POLR2J3-218ENST00000513506 DOCK6Q96HP0 2047 aa16.36■□□□□ 0.21
POLR2J3-218ENST00000513506 A0A1W2PRU2 124 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms