RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 ASXL3Q9C0F0 2248 aa11.25□□□□□ -0.61
CLDND1-227ENST00000513452 URB1O60287 2271 aaKnown RBP11.25□□□□□ -0.61
CLDND1-227ENST00000513452 CEP192Q8TEP8 1941 aa11.25□□□□□ -0.61
CLDND1-227ENST00000513452 KALRNO60229 2985 aa11.24□□□□□ -0.61
CLDND1-227ENST00000513452 NAV2Q8IVL1 2488 aa11.24□□□□□ -0.61
CLDND1-227ENST00000513452 TBC1D3BA6NDS4 549 aa11.24□□□□□ -0.61
CLDND1-227ENST00000513452 TRABD2BA6NFA1 517 aa11.24□□□□□ -0.61
CLDND1-227ENST00000513452 GOLGA8CPA6NN73 597 aa11.24□□□□□ -0.61
CLDND1-227ENST00000513452 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.24□□□□□ -0.61
CLDND1-227ENST00000513452 TULP1O00294 542 aaPredicted RBP11.24□□□□□ -0.61
CLDND1-227ENST00000513452 HCRTO43612 131 aa11.24□□□□□ -0.61
CLDND1-227ENST00000513452 NDUFS2O75306 463 aa11.24□□□□□ -0.61
CLDND1-227ENST00000513452 ATXN1LP0C7T5 689 aaKnown RBP11.24□□□□□ -0.61
CLDND1-227ENST00000513452 GNSP15586 552 aa11.24□□□□□ -0.61
CLDND1-227ENST00000513452 NDUFV2P19404 249 aa11.24□□□□□ -0.61
CLDND1-227ENST00000513452 MAOBP27338 520 aa11.24□□□□□ -0.61
CLDND1-227ENST00000513452 MYL7Q01449 175 aa11.24□□□□□ -0.61
CLDND1-227ENST00000513452 GNL2Q13823 731 aaKnown RBP11.24□□□□□ -0.61
CLDND1-227ENST00000513452 CFAP221Q4G0U5 840 aa11.24□□□□□ -0.61
CLDND1-227ENST00000513452 C10orf76Q5T2E6 689 aa11.24□□□□□ -0.61
CLDND1-227ENST00000513452 SYCP2LQ5T4T6 812 aa11.24□□□□□ -0.61
CLDND1-227ENST00000513452 SCUBE3Q8IX30 993 aa11.24□□□□□ -0.61
CLDND1-227ENST00000513452 ACBD6Q9BR61 282 aa11.24□□□□□ -0.61
CLDND1-227ENST00000513452 FOXP1Q9H334 677 aaPredicted RBP11.24□□□□□ -0.61
CLDND1-227ENST00000513452 IL21RQ9HBE5 538 aa11.24□□□□□ -0.61
CLDND1-227ENST00000513452 TOR4AQ9NXH8 423 aa11.24□□□□□ -0.61
CLDND1-227ENST00000513452 TRPM5Q9NZQ8 1165 aa11.24□□□□□ -0.61
CLDND1-227ENST00000513452 KIAA1522Q9P206 1035 aaPredicted RBP11.24□□□□□ -0.61
CLDND1-227ENST00000513452 CFAP97Q9P2B7 532 aa11.24□□□□□ -0.61
CLDND1-227ENST00000513452 NOL7Q9UMY1 257 aaKnown RBP11.24□□□□□ -0.61
CLDND1-227ENST00000513452 ANAPC1Q9H1A4 1944 aa11.24□□□□□ -0.61
CLDND1-227ENST00000513452 PTPRBP23467 1997 aa11.24□□□□□ -0.61
CLDND1-227ENST00000513452 TENM4Q6N022 2769 aa11.24□□□□□ -0.61
CLDND1-227ENST00000513452 MYH11P35749 1972 aa11.23□□□□□ -0.61
CLDND1-227ENST00000513452 A0A0A0MRY4 1105 aa11.23□□□□□ -0.61
CLDND1-227ENST00000513452 A0A1W2PQF6 199 aa11.23□□□□□ -0.61
CLDND1-227ENST00000513452 FAM149AA5PLN7 773 aa11.23□□□□□ -0.61
CLDND1-227ENST00000513452 TISP43B9A030 160 aa11.23□□□□□ -0.61
CLDND1-227ENST00000513452 TK2O00142 265 aa11.23□□□□□ -0.61
CLDND1-227ENST00000513452 ATXN7O15265 892 aaPredicted RBP11.23□□□□□ -0.61
CLDND1-227ENST00000513452 ZBTB24O43167 697 aaPredicted RBP11.23□□□□□ -0.61
CLDND1-227ENST00000513452 HUS1O60921 280 aa11.23□□□□□ -0.61
CLDND1-227ENST00000513452 ZNF217O75362 1048 aa11.23□□□□□ -0.61
CLDND1-227ENST00000513452 POLR2BP30876 1174 aaKnown RBP11.23□□□□□ -0.61
CLDND1-227ENST00000513452 PNPLA4P41247 253 aa11.23□□□□□ -0.61
CLDND1-227ENST00000513452 TRAPPC10P48553 1259 aa11.23□□□□□ -0.61
CLDND1-227ENST00000513452 SLC12A3P55017 1021 aa11.23□□□□□ -0.61
CLDND1-227ENST00000513452 USP46P62068 366 aa11.23□□□□□ -0.61
CLDND1-227ENST00000513452 SLC7A9P82251 487 aa11.23□□□□□ -0.61
CLDND1-227ENST00000513452 IL17AQ16552 155 aa11.23□□□□□ -0.61
CLDND1-227ENST00000513452 LY6G5CQ5SRR4 150 aa11.23□□□□□ -0.61
CLDND1-227ENST00000513452 ZNF605Q86T29 641 aa11.23□□□□□ -0.61
CLDND1-227ENST00000513452 OSTM1Q86WC4 334 aa11.23□□□□□ -0.61
CLDND1-227ENST00000513452 MIB1Q86YT6 1006 aa11.23□□□□□ -0.61
CLDND1-227ENST00000513452 PHTF2Q8N3S3 785 aa11.23□□□□□ -0.61
CLDND1-227ENST00000513452 ZCCHC9Q8N567 271 aaKnown RBP11.23□□□□□ -0.61
CLDND1-227ENST00000513452 NAT16Q8N8M0 369 aa11.23□□□□□ -0.61
CLDND1-227ENST00000513452 SYT2Q8N9I0 419 aaPredicted RBP11.23□□□□□ -0.61
CLDND1-227ENST00000513452 FUBP3Q96I24 572 aaKnown RBP eCLIP11.23□□□□□ -0.61
CLDND1-227ENST00000513452 C8orf76Q96K31 380 aa11.23□□□□□ -0.61
CLDND1-227ENST00000513452 ZDHHC5Q9C0B5 715 aa11.23□□□□□ -0.61
CLDND1-227ENST00000513452 RNF38Q9H0F5 515 aa11.23□□□□□ -0.61
CLDND1-227ENST00000513452 SLC6A17Q9H1V8 727 aa11.23□□□□□ -0.61
CLDND1-227ENST00000513452 PRDM16Q9HAZ2 1276 aa11.23□□□□□ -0.61
CLDND1-227ENST00000513452 KCND2Q9NZV8 630 aa11.23□□□□□ -0.61
CLDND1-227ENST00000513452 CFAP46Q8IYW2 2715 aa11.22□□□□□ -0.61
CLDND1-227ENST00000513452 MEI4A8MW99 385 aa11.22□□□□□ -0.61
CLDND1-227ENST00000513452 ANKRD63C9JTQ0 380 aa11.22□□□□□ -0.61
CLDND1-227ENST00000513452 TULP3O75386 442 aa11.22□□□□□ -0.61
CLDND1-227ENST00000513452 ABL1P00519 1130 aa11.22□□□□□ -0.61
CLDND1-227ENST00000513452 PLA2G4BP0C869 781 aa11.22□□□□□ -0.61
CLDND1-227ENST00000513452 PFKLP17858 780 aa11.22□□□□□ -0.61
CLDND1-227ENST00000513452 ITPKBP27987 946 aa11.22□□□□□ -0.61
CLDND1-227ENST00000513452 NTSR1P30989 418 aa11.22□□□□□ -0.61
CLDND1-227ENST00000513452 MAGEA11P43364 429 aa11.22□□□□□ -0.61
CLDND1-227ENST00000513452 CAMK2BQ13554 666 aa11.22□□□□□ -0.61
CLDND1-227ENST00000513452 WDR45BQ5MNZ6 344 aa11.22□□□□□ -0.61
CLDND1-227ENST00000513452 BTBD8Q5XKL5 378 aa11.22□□□□□ -0.61
CLDND1-227ENST00000513452 EGFLAMQ63HQ2 1017 aa11.22□□□□□ -0.61
CLDND1-227ENST00000513452 LARP1BQ659C4 914 aaKnown RBP11.22□□□□□ -0.61
CLDND1-227ENST00000513452 ADALQ6DHV7 355 aa11.22□□□□□ -0.61
CLDND1-227ENST00000513452 ADGRF2Q8IZF7 708 aa11.22□□□□□ -0.61
CLDND1-227ENST00000513452 GALNT15Q8N3T1 639 aa11.22□□□□□ -0.61
CLDND1-227ENST00000513452 MYCT1Q8N699 235 aa11.22□□□□□ -0.61
CLDND1-227ENST00000513452 KIAA1958Q8N8K9 716 aa11.22□□□□□ -0.61
CLDND1-227ENST00000513452 TERB1Q8NA31 727 aa11.22□□□□□ -0.61
CLDND1-227ENST00000513452 BAHD1Q8TBE0 780 aaPredicted RBP11.22□□□□□ -0.61
CLDND1-227ENST00000513452 FOXJ1Q92949 421 aa11.22□□□□□ -0.61
CLDND1-227ENST00000513452 KCNN1Q92952 543 aa11.22□□□□□ -0.61
CLDND1-227ENST00000513452 ZNF419Q96HQ0 510 aaPredicted RBP11.22□□□□□ -0.61
CLDND1-227ENST00000513452 REEP2Q9BRK0 252 aa11.22□□□□□ -0.61
CLDND1-227ENST00000513452 GAREM1Q9H706 876 aa11.22□□□□□ -0.61
CLDND1-227ENST00000513452 HCN2Q9UL51 889 aa11.22□□□□□ -0.61
CLDND1-227ENST00000513452 AGAP1Q9UPQ3 857 aa11.22□□□□□ -0.61
CLDND1-227ENST00000513452 FNDC3AQ9Y2H6 1198 aaKnown RBP11.22□□□□□ -0.61
CLDND1-227ENST00000513452 PCDHB6Q9Y5E3 794 aa11.22□□□□□ -0.61
CLDND1-227ENST00000513452 RAI2Q9Y5P3 530 aa11.22□□□□□ -0.61
CLDND1-227ENST00000513452 A0A1B0GTW7 788 aa11.21□□□□□ -0.61
CLDND1-227ENST00000513452 ZNF840PA6NDX5 716 aa11.21□□□□□ -0.61
CLDND1-227ENST00000513452 ATP2C2O75185 946 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms