RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 DPYSL4O14531 572 aa9.66□□□□□ -0.86
CPNE4-210ENST00000512332 CHADO15335 359 aa9.66□□□□□ -0.86
CPNE4-210ENST00000512332 LGALS2P05162 132 aa9.66□□□□□ -0.86
CPNE4-210ENST00000512332 ARF4P18085 180 aaPredicted RBP9.66□□□□□ -0.86
CPNE4-210ENST00000512332 KRT4P19013 534 aa9.66□□□□□ -0.86
CPNE4-210ENST00000512332 ALDH3A1P30838 453 aa9.66□□□□□ -0.86
CPNE4-210ENST00000512332 SSTR1P30872 391 aa9.66□□□□□ -0.86
CPNE4-210ENST00000512332 ADCY1Q08828 1119 aa9.66□□□□□ -0.86
CPNE4-210ENST00000512332 SF3A3Q12874 501 aaKnown RBP eCLIP9.66□□□□□ -0.86
CPNE4-210ENST00000512332 SETDB1Q15047 1291 aa9.66□□□□□ -0.86
CPNE4-210ENST00000512332 HP1BP3Q5SSJ5 553 aaPredicted RBP9.66□□□□□ -0.86
CPNE4-210ENST00000512332 FAM102AQ5T9C2 384 aaPredicted RBP9.66□□□□□ -0.86
CPNE4-210ENST00000512332 ANKMY2Q8IV38 441 aa9.66□□□□□ -0.86
CPNE4-210ENST00000512332 PALM2Q8IXS6 379 aa9.66□□□□□ -0.86
CPNE4-210ENST00000512332 FAM71DQ8N9W8 422 aa9.66□□□□□ -0.86
CPNE4-210ENST00000512332 FBXO36Q8NEA4 188 aa9.66□□□□□ -0.86
CPNE4-210ENST00000512332 LRRC8CQ8TDW0 803 aa9.66□□□□□ -0.86
CPNE4-210ENST00000512332 FBF1Q8TES7 1133 aa9.66□□□□□ -0.86
CPNE4-210ENST00000512332 DCAKDQ8WVC6 231 aa9.66□□□□□ -0.86
CPNE4-210ENST00000512332 TEKT4Q8WW24 435 aa9.66□□□□□ -0.86
CPNE4-210ENST00000512332 TBCBQ99426 244 aa9.66□□□□□ -0.86
CPNE4-210ENST00000512332 PAFAH2Q99487 392 aa9.66□□□□□ -0.86
CPNE4-210ENST00000512332 FDXACB1Q9BRP7 624 aaPredicted RBP9.66□□□□□ -0.86
CPNE4-210ENST00000512332 WDR83Q9BRX9 315 aaKnown RBP9.66□□□□□ -0.86
CPNE4-210ENST00000512332 NT5C1AQ9BXI3 368 aa9.66□□□□□ -0.86
CPNE4-210ENST00000512332 CALN1Q9BXU9 219 aa9.66□□□□□ -0.86
CPNE4-210ENST00000512332 VPS11Q9H270 941 aa9.66□□□□□ -0.86
CPNE4-210ENST00000512332 YY1AP1Q9H869 796 aa9.66□□□□□ -0.86
CPNE4-210ENST00000512332 KIF9Q9HAQ2 790 aa9.66□□□□□ -0.86
CPNE4-210ENST00000512332 XPO7Q9UIA9 1087 aaKnown RBP9.66□□□□□ -0.86
CPNE4-210ENST00000512332 ZSWIM8A7E2V4 1837 aa9.65□□□□□ -0.86
CPNE4-210ENST00000512332 CFAP69A5D8W1 941 aa9.65□□□□□ -0.86
CPNE4-210ENST00000512332 GOLGA8MH3BSY2 632 aa9.65□□□□□ -0.86
CPNE4-210ENST00000512332 DCTN3O75935 186 aa9.65□□□□□ -0.86
CPNE4-210ENST00000512332 TMEM63AO94886 807 aa9.65□□□□□ -0.86
CPNE4-210ENST00000512332 SETSIPP0DME0 302 aa9.65□□□□□ -0.86
CPNE4-210ENST00000512332 PDGFRAP16234 1089 aa9.65□□□□□ -0.86
CPNE4-210ENST00000512332 GBP2P32456 591 aaPredicted RBP9.65□□□□□ -0.86
CPNE4-210ENST00000512332 MSH2P43246 934 aa9.65□□□□□ -0.86
CPNE4-210ENST00000512332 ROR1Q01973 937 aa9.65□□□□□ -0.86
CPNE4-210ENST00000512332 GAD2Q05329 585 aa9.65□□□□□ -0.86
CPNE4-210ENST00000512332 PDE4CQ08493 712 aa9.65□□□□□ -0.86
CPNE4-210ENST00000512332 DNAJC3Q13217 504 aa9.65□□□□□ -0.86
CPNE4-210ENST00000512332 KCNJ11Q14654 390 aa9.65□□□□□ -0.86
CPNE4-210ENST00000512332 TAF5Q15542 800 aa9.65□□□□□ -0.86
CPNE4-210ENST00000512332 SLC1A5Q15758 541 aa9.65□□□□□ -0.86
CPNE4-210ENST00000512332 HHATQ5VTY9 493 aa9.65□□□□□ -0.86
CPNE4-210ENST00000512332 MAP1SQ66K74 1059 aaPredicted RBP9.65□□□□□ -0.86
CPNE4-210ENST00000512332 C4orf33Q8N1A6 199 aa9.65□□□□□ -0.86
CPNE4-210ENST00000512332 BANPQ8N9N5 519 aa9.65□□□□□ -0.86
CPNE4-210ENST00000512332 ANKLE1Q8NAG6 615 aa9.65□□□□□ -0.86
CPNE4-210ENST00000512332 PPTC7Q8NI37 304 aa9.65□□□□□ -0.86
CPNE4-210ENST00000512332 STK32AQ8WU08 396 aa9.65□□□□□ -0.86
CPNE4-210ENST00000512332 GTF3C2Q8WUA4 911 aaPredicted RBP9.65□□□□□ -0.86
CPNE4-210ENST00000512332 RXFP2Q8WXD0 754 aa9.65□□□□□ -0.86
CPNE4-210ENST00000512332 ZNF668Q96K58 619 aaPredicted RBP9.65□□□□□ -0.86
CPNE4-210ENST00000512332 ACAP3Q96P50 834 aa9.65□□□□□ -0.86
CPNE4-210ENST00000512332 RNF157Q96PX1 679 aa9.65□□□□□ -0.86
CPNE4-210ENST00000512332 PEBP4Q96S96 227 aa9.65□□□□□ -0.86
CPNE4-210ENST00000512332 PAIP2Q9BPZ3 127 aaKnown RBP9.65□□□□□ -0.86
CPNE4-210ENST00000512332 PLEKHA5Q9HAU0 1116 aa9.65□□□□□ -0.86
CPNE4-210ENST00000512332 GBA2Q9HCG7 927 aaPredicted RBP9.65□□□□□ -0.86
CPNE4-210ENST00000512332 PNPLA8Q9NP80 782 aa9.65□□□□□ -0.86
CPNE4-210ENST00000512332 CYLDQ9NQC7 956 aa9.65□□□□□ -0.86
CPNE4-210ENST00000512332 PDGFCQ9NRA1 345 aa9.65□□□□□ -0.86
CPNE4-210ENST00000512332 TXLNGQ9NUQ3 528 aa9.65□□□□□ -0.86
CPNE4-210ENST00000512332 DPP3Q9NY33 737 aa9.65□□□□□ -0.86
CPNE4-210ENST00000512332 GRID1Q9ULK0 1009 aa9.65□□□□□ -0.86
CPNE4-210ENST00000512332 DERAQ9Y315 318 aa9.65□□□□□ -0.86
CPNE4-210ENST00000512332 TEX264Q9Y6I9 313 aa9.65□□□□□ -0.86
CPNE4-210ENST00000512332 TCRBV7S3A2A0A539 114 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 ADM5C9JUS6 153 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 IGF2BP3O00425 579 aaKnown RBP eCLIP9.64□□□□□ -0.87
CPNE4-210ENST00000512332 PRPSAP2O60256 369 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 TOMM70O94826 608 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 EZRP15311 586 aaKnown RBP9.64□□□□□ -0.87
CPNE4-210ENST00000512332 TGM2P21980 687 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 MAGEA6P43360 314 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 NDST1P52848 882 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 CDH6P55285 790 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 SNX16P57768 344 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 KCNJ2P63252 427 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 ORC1Q13415 861 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 PKDCCQ504Y2 493 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 TAPT1Q6NXT6 567 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 DARS2Q6PI48 645 aaKnown RBP9.64□□□□□ -0.87
CPNE4-210ENST00000512332 LVRNQ6Q4G3 990 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 DLK2Q6UY11 383 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 C4orf22Q6V702 233 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 FAM47EQ6ZV65 393 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 ARMCX2Q7L311 632 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 TMEM110Q86TL2 294 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 PNMA8AQ86V59 439 aaPredicted RBP9.64□□□□□ -0.87
CPNE4-210ENST00000512332 ZDHHC17Q8IUH5 632 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 ZNF276Q8N554 614 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 HSPH1Q92598 858 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 ZNF75CPQ92670 426 aaPredicted RBP9.64□□□□□ -0.87
CPNE4-210ENST00000512332 EVPLQ92817 2033 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 CLMNQ96JQ2 1002 aa9.64□□□□□ -0.87
CPNE4-210ENST00000512332 LRRC37BQ96QE4 947 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms