RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 C3orf20Q8ND61 904 aa8.52□□□□□ -1.05
HTT-209ENST00000512068 UBA3Q8TBC4 463 aa8.52□□□□□ -1.05
HTT-209ENST00000512068 FEZF2Q8TBJ5 459 aa8.52□□□□□ -1.05
HTT-209ENST00000512068 SYT15Q9BQS2 421 aa8.52□□□□□ -1.05
HTT-209ENST00000512068 PRDM5Q9NQX1 630 aaPredicted RBP8.52□□□□□ -1.05
HTT-209ENST00000512068 RAB6BQ9NRW1 208 aa8.52□□□□□ -1.05
HTT-209ENST00000512068 MIOSQ9NXC5 875 aa8.52□□□□□ -1.05
HTT-209ENST00000512068 DDX43Q9NXZ2 648 aaKnown RBP8.52□□□□□ -1.05
HTT-209ENST00000512068 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.52□□□□□ -1.05
HTT-209ENST00000512068 CDH9Q9ULB4 789 aa8.52□□□□□ -1.05
HTT-209ENST00000512068 COG5Q9UP83 839 aa8.52□□□□□ -1.05
HTT-209ENST00000512068 STXBP5LQ9Y2K9 1186 aa8.52□□□□□ -1.05
HTT-209ENST00000512068 HRH3Q9Y5N1 445 aa8.52□□□□□ -1.05
HTT-209ENST00000512068 ALG6Q9Y672 507 aa8.52□□□□□ -1.05
HTT-209ENST00000512068 V9GYY5 206 aaPredicted RBP8.52□□□□□ -1.05
HTT-209ENST00000512068 SCN5AQ14524 2016 aa8.51□□□□□ -1.05
HTT-209ENST00000512068 MICAL3Q7RTP6 2002 aa8.51□□□□□ -1.05
HTT-209ENST00000512068 AXIN1O15169 862 aa8.51□□□□□ -1.05
HTT-209ENST00000512068 ZNF185O15231 689 aa8.51□□□□□ -1.05
HTT-209ENST00000512068 INPPL1O15357 1258 aa8.51□□□□□ -1.05
HTT-209ENST00000512068 SPINT1O43278 529 aa8.51□□□□□ -1.05
HTT-209ENST00000512068 TADA2AO75478 443 aa8.51□□□□□ -1.05
HTT-209ENST00000512068 FAM200BP0CF97 657 aa8.51□□□□□ -1.05
HTT-209ENST00000512068 HSPA1AP0DMV8 641 aaKnown RBP8.51□□□□□ -1.05
HTT-209ENST00000512068 HSPA1BP0DMV9 641 aaKnown RBP8.51□□□□□ -1.05
HTT-209ENST00000512068 FGFR1P11362 822 aa8.51□□□□□ -1.05
HTT-209ENST00000512068 KRT3P12035 628 aa8.51□□□□□ -1.05
HTT-209ENST00000512068 PTPN1P18031 435 aaKnown RBP8.51□□□□□ -1.05
HTT-209ENST00000512068 PSMA2P25787 234 aa8.51□□□□□ -1.05
HTT-209ENST00000512068 MAN1A1P33908 653 aa8.51□□□□□ -1.05
HTT-209ENST00000512068 GJC1P36383 396 aa8.51□□□□□ -1.05
HTT-209ENST00000512068 RWDD2BP57060 319 aa8.51□□□□□ -1.05
HTT-209ENST00000512068 FAM189BP81408 668 aa8.51□□□□□ -1.05
HTT-209ENST00000512068 MAMLD1Q13495 774 aa8.51□□□□□ -1.05
HTT-209ENST00000512068 IKBKEQ14164 716 aa8.51□□□□□ -1.05
HTT-209ENST00000512068 SMC1AQ14683 1233 aaKnown RBP8.51□□□□□ -1.05
HTT-209ENST00000512068 MAPRE1Q15691 268 aaKnown RBP8.51□□□□□ -1.05
HTT-209ENST00000512068 ELF2Q15723 593 aa8.51□□□□□ -1.05
HTT-209ENST00000512068 PTPN20Q4JDL3 420 aa8.51□□□□□ -1.05
HTT-209ENST00000512068 PAN2Q504Q3 1202 aaKnown RBP8.51□□□□□ -1.05
HTT-209ENST00000512068 C2CD6Q53TS8 623 aa8.51□□□□□ -1.05
HTT-209ENST00000512068 FAM102AQ5T9C2 384 aaPredicted RBP8.51□□□□□ -1.05
HTT-209ENST00000512068 PLEKHA7Q6IQ23 1121 aa8.51□□□□□ -1.05
HTT-209ENST00000512068 MRPL14Q6P1L8 145 aaKnown RBP8.51□□□□□ -1.05
HTT-209ENST00000512068 CNKSR3Q6P9H4 555 aa8.51□□□□□ -1.05
HTT-209ENST00000512068 ZDHHC17Q8IUH5 632 aa8.51□□□□□ -1.05
HTT-209ENST00000512068 NPAS4Q8IUM7 802 aa8.51□□□□□ -1.05
HTT-209ENST00000512068 RHOT1Q8IXI2 618 aa8.51□□□□□ -1.05
HTT-209ENST00000512068 CRYBG2Q8N1P7 616 aa8.51□□□□□ -1.05
HTT-209ENST00000512068 C12orf29Q8N999 325 aa8.51□□□□□ -1.05
HTT-209ENST00000512068 GSTCDQ8NEC7 633 aa8.51□□□□□ -1.05
HTT-209ENST00000512068 HASPINQ8TF76 798 aa8.51□□□□□ -1.05
HTT-209ENST00000512068 COG1Q8WTW3 980 aa8.51□□□□□ -1.05
HTT-209ENST00000512068 KBTBD7Q8WVZ9 684 aa8.51□□□□□ -1.05
HTT-209ENST00000512068 RABGGTAQ92696 567 aa8.51□□□□□ -1.05
HTT-209ENST00000512068 HES6Q96HZ4 224 aa8.51□□□□□ -1.05
HTT-209ENST00000512068 SCLYQ96I15 445 aa8.51□□□□□ -1.05
HTT-209ENST00000512068 BTBD6Q96KE9 485 aa8.51□□□□□ -1.05
HTT-209ENST00000512068 MCEEQ96PE7 176 aa8.51□□□□□ -1.05
HTT-209ENST00000512068 ZSWIM1Q9BR11 485 aa8.51□□□□□ -1.05
HTT-209ENST00000512068 COLEC11Q9BWP8 271 aa8.51□□□□□ -1.05
HTT-209ENST00000512068 OSBPL7Q9BZF2 842 aa8.51□□□□□ -1.05
HTT-209ENST00000512068 CARD9Q9H257 536 aa8.51□□□□□ -1.05
HTT-209ENST00000512068 GOLPH3Q9H4A6 298 aa8.51□□□□□ -1.05
HTT-209ENST00000512068 DPEP3Q9H4B8 488 aa8.51□□□□□ -1.05
HTT-209ENST00000512068 ZNF395Q9H8N7 513 aaPredicted RBP8.51□□□□□ -1.05
HTT-209ENST00000512068 METTL5Q9NRN9 209 aaKnown RBP8.51□□□□□ -1.05
HTT-209ENST00000512068 PRKAG2Q9UGJ0 569 aa8.51□□□□□ -1.05
HTT-209ENST00000512068 CHORDC1Q9UHD1 332 aaPredicted RBP8.51□□□□□ -1.05
HTT-209ENST00000512068 MTUS1Q9ULD2 1270 aa8.51□□□□□ -1.05
HTT-209ENST00000512068 TBKBP1A7MCY6 615 aa8.5□□□□□ -1.05
HTT-209ENST00000512068 ENPP3O14638 875 aa8.5□□□□□ -1.05
HTT-209ENST00000512068 PSTPIP1O43586 416 aa8.5□□□□□ -1.05
HTT-209ENST00000512068 EFCAB14O75071 495 aa8.5□□□□□ -1.05
HTT-209ENST00000512068 RNF8O76064 485 aa8.5□□□□□ -1.05
HTT-209ENST00000512068 PROSCO94903 275 aa8.5□□□□□ -1.05
HTT-209ENST00000512068 TUBBP07437 444 aa8.5□□□□□ -1.05
HTT-209ENST00000512068 CCDC130P13994 396 aa8.5□□□□□ -1.05
HTT-209ENST00000512068 RAG1P15918 1043 aa8.5□□□□□ -1.05
HTT-209ENST00000512068 TYMPP19971 482 aa8.5□□□□□ -1.05
HTT-209ENST00000512068 ACAT1P24752 427 aaKnown RBP8.5□□□□□ -1.05
HTT-209ENST00000512068 CTNNA2P26232 953 aa8.5□□□□□ -1.05
HTT-209ENST00000512068 CYP2C18P33260 490 aa8.5□□□□□ -1.05
HTT-209ENST00000512068 CTNNA1P35221 906 aaKnown RBP8.5□□□□□ -1.05
HTT-209ENST00000512068 GPD2P43304 727 aa8.5□□□□□ -1.05
HTT-209ENST00000512068 RGS7P49802 495 aa8.5□□□□□ -1.05
HTT-209ENST00000512068 GSCP56915 257 aaPredicted RBP8.5□□□□□ -1.05
HTT-209ENST00000512068 ITIH3Q06033 890 aa8.5□□□□□ -1.05
HTT-209ENST00000512068 C2orf54Q08AI8 447 aa8.5□□□□□ -1.05
HTT-209ENST00000512068 FAAP100Q0VG06 881 aa8.5□□□□□ -1.05
HTT-209ENST00000512068 PTP4A2Q12974 167 aa8.5□□□□□ -1.05
HTT-209ENST00000512068 PPP2R5EQ16537 467 aa8.5□□□□□ -1.05
HTT-209ENST00000512068 HADHQ16836 314 aaKnown RBP8.5□□□□□ -1.05
HTT-209ENST00000512068 LONRF2Q1L5Z9 754 aa8.5□□□□□ -1.05
HTT-209ENST00000512068 ERCC6LQ2NKX8 1250 aa8.5□□□□□ -1.05
HTT-209ENST00000512068 MDH1BQ5I0G3 518 aa8.5□□□□□ -1.05
HTT-209ENST00000512068 SPOUT1Q5T280 376 aaKnown RBP8.5□□□□□ -1.05
HTT-209ENST00000512068 OVOS1Q6IE37 1185 aa8.5□□□□□ -1.05
HTT-209ENST00000512068 C8orf74Q6P047 294 aa8.5□□□□□ -1.05
HTT-209ENST00000512068 OSTM1Q86WC4 334 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms