RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 ZMYM5Q9UJ78 669 aa17.49■□□□□ 0.39
DDX41-213ENST00000512027 ZFHX2Q9C0A1 2572 aaPredicted RBP17.49■□□□□ 0.39
DDX41-213ENST00000512027 ZNF840PA6NDX5 716 aa17.48■□□□□ 0.39
DDX41-213ENST00000512027 OTOL1A6NHN0 477 aaPredicted RBP17.48■□□□□ 0.39
DDX41-213ENST00000512027 SPECC1L-ADORA2AF8WAN1 911 aa17.48■□□□□ 0.39
DDX41-213ENST00000512027 SCAMP3O14828 347 aaKnown RBP17.48■□□□□ 0.39
DDX41-213ENST00000512027 HDCP19113 662 aa17.48■□□□□ 0.39
DDX41-213ENST00000512027 HOXD11P31277 338 aaPredicted RBP17.48■□□□□ 0.39
DDX41-213ENST00000512027 MRE11P49959 708 aa17.48■□□□□ 0.39
DDX41-213ENST00000512027 USP4Q13107 963 aa17.48■□□□□ 0.39
DDX41-213ENST00000512027 PAK1Q13153 545 aa17.48■□□□□ 0.39
DDX41-213ENST00000512027 MTF1Q14872 753 aa17.48■□□□□ 0.39
DDX41-213ENST00000512027 ZNF77Q15935 545 aa17.48■□□□□ 0.39
DDX41-213ENST00000512027 GPRIN1Q7Z2K8 1008 aa17.48■□□□□ 0.39
DDX41-213ENST00000512027 FILIP1Q7Z7B0 1213 aa17.48■□□□□ 0.39
DDX41-213ENST00000512027 SH3RF2Q8TEC5 729 aa17.48■□□□□ 0.39
DDX41-213ENST00000512027 FBXO32Q969P5 355 aa17.48■□□□□ 0.39
DDX41-213ENST00000512027 FAM83CQ9BQN1 747 aa17.48■□□□□ 0.39
DDX41-213ENST00000512027 OSBPL6Q9BZF3 934 aa17.48■□□□□ 0.39
DDX41-213ENST00000512027 RNF38Q9H0F5 515 aa17.48■□□□□ 0.39
DDX41-213ENST00000512027 CISHQ9NSE2 258 aa17.48■□□□□ 0.39
DDX41-213ENST00000512027 RBM12Q9NTZ6 932 aaKnown RBP17.48■□□□□ 0.39
DDX41-213ENST00000512027 SPATA6Q9NWH7 488 aaPredicted RBP17.48■□□□□ 0.39
DDX41-213ENST00000512027 WNT6Q9Y6F9 365 aa17.48■□□□□ 0.39
DDX41-213ENST00000512027 MAN2B1O00754 1011 aa17.47■□□□□ 0.39
DDX41-213ENST00000512027 FAM200BP0CF97 657 aa17.47■□□□□ 0.39
DDX41-213ENST00000512027 YWHAQP27348 245 aa17.47■□□□□ 0.39
DDX41-213ENST00000512027 CTHP32929 405 aa17.47■□□□□ 0.39
DDX41-213ENST00000512027 PPP1R2P41236 205 aa17.47■□□□□ 0.39
DDX41-213ENST00000512027 FMO5P49326 533 aa17.47■□□□□ 0.39
DDX41-213ENST00000512027 PGFP49763 221 aa17.47■□□□□ 0.39
DDX41-213ENST00000512027 ZNF268Q14587 947 aaPredicted RBP17.47■□□□□ 0.39
DDX41-213ENST00000512027 PPP1R26Q5T8A7 1209 aaPredicted RBP17.47■□□□□ 0.39
DDX41-213ENST00000512027 NAIF1Q69YI7 327 aaPredicted RBP17.47■□□□□ 0.39
DDX41-213ENST00000512027 CLEC20AQ6ZU45 233 aa17.47■□□□□ 0.39
DDX41-213ENST00000512027 FRMD5Q7Z6J6 570 aa17.47■□□□□ 0.39
DDX41-213ENST00000512027 C1orf210Q8IVY1 113 aa17.47■□□□□ 0.39
DDX41-213ENST00000512027 MAML2Q8IZL2 1156 aaPredicted RBP17.47■□□□□ 0.39
DDX41-213ENST00000512027 SLC4A11Q8NBS3 891 aa17.47■□□□□ 0.39
DDX41-213ENST00000512027 CHFRQ96EP1 664 aa17.47■□□□□ 0.39
DDX41-213ENST00000512027 CYFIP2Q96F07 1278 aa17.47■□□□□ 0.39
DDX41-213ENST00000512027 SLITRK1Q96PX8 696 aa17.47■□□□□ 0.39
DDX41-213ENST00000512027 THG1LQ9NWX6 298 aaKnown RBP17.47■□□□□ 0.39
DDX41-213ENST00000512027 SMPD4Q9NXE4 827 aa17.47■□□□□ 0.39
DDX41-213ENST00000512027 GMIPQ9P107 970 aa17.47■□□□□ 0.39
DDX41-213ENST00000512027 CHORDC1Q9UHD1 332 aaPredicted RBP17.47■□□□□ 0.39
DDX41-213ENST00000512027 MRPS17Q9Y2R5 130 aaKnown RBP17.47■□□□□ 0.39
DDX41-213ENST00000512027 COQ4Q9Y3A0 265 aa17.47■□□□□ 0.39
DDX41-213ENST00000512027 BICDL2A1A5D9 508 aa17.46■□□□□ 0.39
DDX41-213ENST00000512027 SOBPA7XYQ1 873 aa17.46■□□□□ 0.39
DDX41-213ENST00000512027 RTN3O95197 1032 aaPredicted RBP17.46■□□□□ 0.39
DDX41-213ENST00000512027 PLCB2Q00722 1185 aa17.46■□□□□ 0.39
DDX41-213ENST00000512027 PON2Q15165 354 aa17.46■□□□□ 0.39
DDX41-213ENST00000512027 ITPRIPL2Q3MIP1 535 aa17.46■□□□□ 0.39
DDX41-213ENST00000512027 CLDN23Q96B33 292 aa17.46■□□□□ 0.39
DDX41-213ENST00000512027 MED15Q96RN5 788 aa17.46■□□□□ 0.39
DDX41-213ENST00000512027 HNRNPABQ99729 332 aaKnown RBP17.46■□□□□ 0.39
DDX41-213ENST00000512027 SRRTQ9BXP5 876 aaKnown RBP17.46■□□□□ 0.39
DDX41-213ENST00000512027 CLSTN2Q9H4D0 955 aa17.46■□□□□ 0.39
DDX41-213ENST00000512027 LMAN1LQ9HAT1 526 aa17.46■□□□□ 0.39
DDX41-213ENST00000512027 METTL14Q9HCE5 456 aaKnown RBP17.46■□□□□ 0.39
DDX41-213ENST00000512027 CSNK1G1Q9HCP0 422 aa17.46■□□□□ 0.39
DDX41-213ENST00000512027 EHD2Q9NZN4 543 aa17.46■□□□□ 0.39
DDX41-213ENST00000512027 CPQQ9Y646 472 aa17.46■□□□□ 0.39
DDX41-213ENST00000512027 FANCMQ8IYD8 2048 aa17.45■□□□□ 0.38
DDX41-213ENST00000512027 HHLA1C9JL84 531 aa17.45■□□□□ 0.38
DDX41-213ENST00000512027 LEFTY2O00292 366 aa17.45■□□□□ 0.38
DDX41-213ENST00000512027 OAS1P00973 400 aaKnown RBP17.45■□□□□ 0.38
DDX41-213ENST00000512027 RAD23BP54727 409 aa17.45■□□□□ 0.38
DDX41-213ENST00000512027 CUL2Q13617 745 aa17.45■□□□□ 0.38
DDX41-213ENST00000512027 RUNX3Q13761 415 aa17.45■□□□□ 0.38
DDX41-213ENST00000512027 CC2D1AQ6P1N0 951 aaPredicted RBP17.45■□□□□ 0.38
DDX41-213ENST00000512027 TRIML1Q8N9V2 468 aa17.45■□□□□ 0.38
DDX41-213ENST00000512027 KAT5Q92993 513 aa17.45■□□□□ 0.38
DDX41-213ENST00000512027 HEXIM2Q96MH2 286 aaKnown RBP17.45■□□□□ 0.38
DDX41-213ENST00000512027 NELL2Q99435 816 aa17.45■□□□□ 0.38
DDX41-213ENST00000512027 LINC00597Q9H2U6 94 aa17.45■□□□□ 0.38
DDX41-213ENST00000512027 C8orf33Q9H7E9 229 aaPredicted RBP17.45■□□□□ 0.38
DDX41-213ENST00000512027 CCSER2Q9H7U1 834 aa17.45■□□□□ 0.38
DDX41-213ENST00000512027 ARHGAP26Q9UNA1 814 aa17.45■□□□□ 0.38
DDX41-213ENST00000512027 R4GN57 208 aa17.45■□□□□ 0.38
DDX41-213ENST00000512027 ATG2BQ96BY7 2078 aa17.44■□□□□ 0.38
DDX41-213ENST00000512027 NCAM2O15394 837 aa17.44■□□□□ 0.38
DDX41-213ENST00000512027 CYP26A1O43174 497 aa17.44■□□□□ 0.38
DDX41-213ENST00000512027 OLFM2O95897 454 aa17.44■□□□□ 0.38
DDX41-213ENST00000512027 SP9P0CG40 484 aa17.44■□□□□ 0.38
DDX41-213ENST00000512027 MBL2P11226 248 aaPredicted RBP17.44■□□□□ 0.38
DDX41-213ENST00000512027 CHRNB1P11230 501 aa17.44■□□□□ 0.38
DDX41-213ENST00000512027 MTAPQ13126 283 aa17.44■□□□□ 0.38
DDX41-213ENST00000512027 GAS6Q14393 721 aa17.44■□□□□ 0.38
DDX41-213ENST00000512027 TSSK4Q6SA08 328 aa17.44■□□□□ 0.38
DDX41-213ENST00000512027 Q6ZS52 159 aa17.44■□□□□ 0.38
DDX41-213ENST00000512027 RALGPS2Q86X27 583 aaPredicted RBP17.44■□□□□ 0.38
DDX41-213ENST00000512027 TRIM59Q8IWR1 403 aa17.44■□□□□ 0.38
DDX41-213ENST00000512027 OSCP1Q8WVF1 389 aa17.44■□□□□ 0.38
DDX41-213ENST00000512027 TMEM176AQ96HP8 235 aa17.44■□□□□ 0.38
DDX41-213ENST00000512027 IRF2BPLQ9H1B7 796 aa17.44■□□□□ 0.38
DDX41-213ENST00000512027 LMBRD1Q9NUN5 540 aa17.44■□□□□ 0.38
DDX41-213ENST00000512027 DUS2Q9NX74 493 aaKnown RBP17.44■□□□□ 0.38
DDX41-213ENST00000512027 IL37Q9NZH6 218 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms