RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 TTC3P53804 2025 aa9.6□□□□□ -0.87
NR1I3-228ENST00000511676 TCRBV5S1A1TA0A578 114 aa9.6□□□□□ -0.87
NR1I3-228ENST00000511676 TBKBP1A7MCY6 615 aa9.6□□□□□ -0.87
NR1I3-228ENST00000511676 TMCO5BA8MYB1 307 aa9.6□□□□□ -0.87
NR1I3-228ENST00000511676 M0QYV0 167 aa9.6□□□□□ -0.87
NR1I3-228ENST00000511676 BUB1O43683 1085 aa9.6□□□□□ -0.87
NR1I3-228ENST00000511676 BUB1BO60566 1050 aaPredicted RBP9.6□□□□□ -0.87
NR1I3-228ENST00000511676 FGF18O76093 207 aa9.6□□□□□ -0.87
NR1I3-228ENST00000511676 MICAL2O94851 1124 aa9.6□□□□□ -0.87
NR1I3-228ENST00000511676 SLU7O95391 586 aaKnown RBP9.6□□□□□ -0.87
NR1I3-228ENST00000511676 ITGB1P05556 798 aa9.6□□□□□ -0.87
NR1I3-228ENST00000511676 LTBRP36941 435 aa9.6□□□□□ -0.87
NR1I3-228ENST00000511676 RNASELQ05823 741 aaKnown RBP9.6□□□□□ -0.87
NR1I3-228ENST00000511676 SMARCB1Q12824 385 aa9.6□□□□□ -0.87
NR1I3-228ENST00000511676 PDCLQ13371 301 aa9.6□□□□□ -0.87
NR1I3-228ENST00000511676 MAMLD1Q13495 774 aa9.6□□□□□ -0.87
NR1I3-228ENST00000511676 MTMR3Q13615 1198 aa9.6□□□□□ -0.87
NR1I3-228ENST00000511676 RPS6KA1Q15418 735 aa9.6□□□□□ -0.87
NR1I3-228ENST00000511676 DUSP6Q16828 381 aa9.6□□□□□ -0.87
NR1I3-228ENST00000511676 ZNF394Q53GI3 561 aa9.6□□□□□ -0.87
NR1I3-228ENST00000511676 PPP1R15BQ5SWA1 713 aa9.6□□□□□ -0.87
NR1I3-228ENST00000511676 DSTYKQ6XUX3 929 aa9.6□□□□□ -0.87
NR1I3-228ENST00000511676 HFE2Q6ZVN8 426 aa9.6□□□□□ -0.87
NR1I3-228ENST00000511676 PEX26Q7Z412 305 aa9.6□□□□□ -0.87
NR1I3-228ENST00000511676 TMEM110Q86TL2 294 aa9.6□□□□□ -0.87
NR1I3-228ENST00000511676 NT5DC3Q86UY8 548 aa9.6□□□□□ -0.87
NR1I3-228ENST00000511676 WDTC1Q8N5D0 677 aa9.6□□□□□ -0.87
NR1I3-228ENST00000511676 UBL4BQ8N7F7 174 aa9.6□□□□□ -0.87
NR1I3-228ENST00000511676 SLC35F5Q8WV83 523 aa9.6□□□□□ -0.87
NR1I3-228ENST00000511676 CPA5Q8WXQ8 436 aa9.6□□□□□ -0.87
NR1I3-228ENST00000511676 ELMO3Q96BJ8 720 aa9.6□□□□□ -0.87
NR1I3-228ENST00000511676 C18orf8Q96DM3 657 aa9.6□□□□□ -0.87
NR1I3-228ENST00000511676 MCRS1Q96EZ8 462 aa9.6□□□□□ -0.87
NR1I3-228ENST00000511676 TMEM169Q96HH4 297 aa9.6□□□□□ -0.87
NR1I3-228ENST00000511676 HSFY1Q96LI6 401 aa9.6□□□□□ -0.87
NR1I3-228ENST00000511676 FAM193BQ96PV7 902 aaPredicted RBP9.6□□□□□ -0.87
NR1I3-228ENST00000511676 NUP85Q9BW27 656 aa9.6□□□□□ -0.87
NR1I3-228ENST00000511676 SLC4A5Q9BY07 1137 aa9.6□□□□□ -0.87
NR1I3-228ENST00000511676 CARD9Q9H257 536 aa9.6□□□□□ -0.87
NR1I3-228ENST00000511676 SEMA4AQ9H3S1 761 aa9.6□□□□□ -0.87
NR1I3-228ENST00000511676 CD320Q9NPF0 282 aa9.6□□□□□ -0.87
NR1I3-228ENST00000511676 TMEM51Q9NW97 253 aa9.6□□□□□ -0.87
NR1I3-228ENST00000511676 RAPGEFL1Q9UHV5 662 aa9.6□□□□□ -0.87
NR1I3-228ENST00000511676 MUTYHQ9UIF7 546 aa9.6□□□□□ -0.87
NR1I3-228ENST00000511676 TSPAN16Q9UKR8 245 aa9.6□□□□□ -0.87
NR1I3-228ENST00000511676 AMFRQ9UKV5 643 aa9.6□□□□□ -0.87
NR1I3-228ENST00000511676 TTC7AQ9ULT0 858 aaPredicted RBP9.6□□□□□ -0.87
NR1I3-228ENST00000511676 TFR2Q9UP52 801 aa9.6□□□□□ -0.87
NR1I3-228ENST00000511676 USTQ9Y2C2 406 aa9.6□□□□□ -0.87
NR1I3-228ENST00000511676 MRPL42Q9Y6G3 142 aaKnown RBP9.6□□□□□ -0.87
NR1I3-228ENST00000511676 SF3B1O75533 1304 aaKnown RBP eCLIP9.59□□□□□ -0.87
NR1I3-228ENST00000511676 TMEM191CA6NGB0 347 aa9.59□□□□□ -0.87
NR1I3-228ENST00000511676 CASTOR2A6NHX0 329 aa9.59□□□□□ -0.87
NR1I3-228ENST00000511676 SIGLEC16A6NMB1 481 aa9.59□□□□□ -0.87
NR1I3-228ENST00000511676 EFCAB8A8MWE9 144 aa9.59□□□□□ -0.87
NR1I3-228ENST00000511676 MYO1FO00160 1098 aa9.59□□□□□ -0.87
NR1I3-228ENST00000511676 XPO1O14980 1071 aaKnown RBP9.59□□□□□ -0.87
NR1I3-228ENST00000511676 SART1O43290 800 aaKnown RBP9.59□□□□□ -0.87
NR1I3-228ENST00000511676 CTIFO43310 598 aaKnown RBP9.59□□□□□ -0.87
NR1I3-228ENST00000511676 PROSCO94903 275 aa9.59□□□□□ -0.87
NR1I3-228ENST00000511676 OAZ2O95190 189 aa9.59□□□□□ -0.87
NR1I3-228ENST00000511676 C1RP00736 705 aa9.59□□□□□ -0.87
NR1I3-228ENST00000511676 POMCP01189 267 aa9.59□□□□□ -0.87
NR1I3-228ENST00000511676 ERBB2P04626 1255 aa9.59□□□□□ -0.87
NR1I3-228ENST00000511676 ATP1A1P05023 1023 aaKnown RBP9.59□□□□□ -0.87
NR1I3-228ENST00000511676 TUBBP07437 444 aa9.59□□□□□ -0.87
NR1I3-228ENST00000511676 DESP17661 470 aa9.59□□□□□ -0.87
NR1I3-228ENST00000511676 PTPN1P18031 435 aaKnown RBP9.59□□□□□ -0.87
NR1I3-228ENST00000511676 RRM1P23921 792 aa9.59□□□□□ -0.87
NR1I3-228ENST00000511676 CTNNA2P26232 953 aa9.59□□□□□ -0.87
NR1I3-228ENST00000511676 PLA2G4AP47712 749 aa9.59□□□□□ -0.87
NR1I3-228ENST00000511676 AFF1P51825 1210 aaKnown RBP9.59□□□□□ -0.87
NR1I3-228ENST00000511676 PIGHQ14442 188 aaPredicted RBP9.59□□□□□ -0.87
NR1I3-228ENST00000511676 PTPN20Q4JDL3 420 aa9.59□□□□□ -0.87
NR1I3-228ENST00000511676 LRRC38Q5VT99 294 aa9.59□□□□□ -0.87
NR1I3-228ENST00000511676 WSCD1Q658N2 575 aa9.59□□□□□ -0.87
NR1I3-228ENST00000511676 DENND1BQ6P3S1 775 aa9.59□□□□□ -0.87
NR1I3-228ENST00000511676 DNAJC24Q6P3W2 148 aa9.59□□□□□ -0.87
NR1I3-228ENST00000511676 CD300LGQ6UXG3 332 aa9.59□□□□□ -0.87
NR1I3-228ENST00000511676 MMS22LQ6ZRQ5 1243 aa9.59□□□□□ -0.87
NR1I3-228ENST00000511676 ACOT1Q86TX2 421 aa9.59□□□□□ -0.87
NR1I3-228ENST00000511676 GPR65Q8IYL9 337 aa9.59□□□□□ -0.87
NR1I3-228ENST00000511676 THEM5Q8N1Q8 247 aa9.59□□□□□ -0.87
NR1I3-228ENST00000511676 SCML4Q8N228 414 aa9.59□□□□□ -0.87
NR1I3-228ENST00000511676 C3orf58Q8NDZ4 430 aa9.59□□□□□ -0.87
NR1I3-228ENST00000511676 KCTD13Q8WZ19 329 aa9.59□□□□□ -0.87
NR1I3-228ENST00000511676 CD101Q93033 1021 aa9.59□□□□□ -0.87
NR1I3-228ENST00000511676 NXPE3Q969Y0 559 aa9.59□□□□□ -0.87
NR1I3-228ENST00000511676 CASD1Q96PB1 797 aa9.59□□□□□ -0.87
NR1I3-228ENST00000511676 OSBPL9Q96SU4 736 aa9.59□□□□□ -0.87
NR1I3-228ENST00000511676 NAP1L3Q99457 506 aaPredicted RBP9.59□□□□□ -0.87
NR1I3-228ENST00000511676 C11orf70Q9BRQ4 267 aa9.59□□□□□ -0.87
NR1I3-228ENST00000511676 SELENOOQ9BVL4 669 aa9.59□□□□□ -0.87
NR1I3-228ENST00000511676 COLEC11Q9BWP8 271 aa9.59□□□□□ -0.87
NR1I3-228ENST00000511676 EMILIN2Q9BXX0 1053 aa9.59□□□□□ -0.87
NR1I3-228ENST00000511676 MFSD1Q9H3U5 465 aa9.59□□□□□ -0.87
NR1I3-228ENST00000511676 OSGEPQ9NPF4 335 aa9.59□□□□□ -0.87
NR1I3-228ENST00000511676 IP6K2Q9UHH9 426 aa9.59□□□□□ -0.87
NR1I3-228ENST00000511676 SORCS3Q9UPU3 1222 aa9.59□□□□□ -0.87
NR1I3-228ENST00000511676 INPP5FQ9Y2H2 1132 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms