RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 CRYBG2Q8N1P7 616 aa24.39■■□□□ 1.49
SNF8-209ENST00000510558 ERCC4Q92889 916 aaPredicted RBP24.39■■□□□ 1.49
SNF8-209ENST00000510558 CHFRQ96EP1 664 aa24.39■■□□□ 1.49
SNF8-209ENST00000510558 EEF2KMTQ96G04 330 aa24.39■■□□□ 1.49
SNF8-209ENST00000510558 APOBEC3GQ9HC16 384 aaKnown RBP24.39■■□□□ 1.49
SNF8-209ENST00000510558 TMEM8AQ9HCN3 771 aa24.39■■□□□ 1.49
SNF8-209ENST00000510558 DMAP1Q9NPF5 467 aaPredicted RBP24.39■■□□□ 1.49
SNF8-209ENST00000510558 WNT6Q9Y6F9 365 aa24.39■■□□□ 1.49
SNF8-209ENST00000510558 GVINP1Q7Z2Y8 2422 aa24.38■■□□□ 1.49
SNF8-209ENST00000510558 AP1G2O75843 785 aa24.38■■□□□ 1.49
SNF8-209ENST00000510558 SMC2O95347 1197 aa24.38■■□□□ 1.49
SNF8-209ENST00000510558 ABL1P00519 1130 aa24.38■■□□□ 1.49
SNF8-209ENST00000510558 CCDC130P13994 396 aa24.38■■□□□ 1.49
SNF8-209ENST00000510558 CXCL12P48061 93 aa24.38■■□□□ 1.49
SNF8-209ENST00000510558 COBLL1Q53SF7 1204 aa24.38■■□□□ 1.49
SNF8-209ENST00000510558 CPA6Q8N4T0 437 aa24.38■■□□□ 1.49
SNF8-209ENST00000510558 SUMF1Q8NBK3 374 aa24.38■■□□□ 1.49
SNF8-209ENST00000510558 SPATA20Q8TB22 786 aa24.38■■□□□ 1.49
SNF8-209ENST00000510558 ATP2A3Q93084 1043 aa24.38■■□□□ 1.49
SNF8-209ENST00000510558 SMARCE1Q969G3 411 aa24.38■■□□□ 1.49
SNF8-209ENST00000510558 TIGD1Q96MW7 591 aa24.38■■□□□ 1.49
SNF8-209ENST00000510558 ECT2Q9H8V3 914 aa24.38■■□□□ 1.49
SNF8-209ENST00000510558 KRT82Q9NSB4 513 aa24.38■■□□□ 1.49
SNF8-209ENST00000510558 PCDHA5Q9Y5H7 936 aa24.38■■□□□ 1.49
SNF8-209ENST00000510558 ATG2BQ96BY7 2078 aa24.38■■□□□ 1.49
SNF8-209ENST00000510558 CETN3O15182 167 aa24.37■■□□□ 1.49
SNF8-209ENST00000510558 LILRB5O75023 590 aa24.37■■□□□ 1.49
SNF8-209ENST00000510558 OLFM2O95897 454 aa24.37■■□□□ 1.49
SNF8-209ENST00000510558 OAS1P00973 400 aaKnown RBP24.37■■□□□ 1.49
SNF8-209ENST00000510558 EPB41P11171 864 aaKnown RBP24.37■■□□□ 1.49
SNF8-209ENST00000510558 GTF2H1P32780 548 aa24.37■■□□□ 1.49
SNF8-209ENST00000510558 NRLP54845 237 aa24.37■■□□□ 1.49
SNF8-209ENST00000510558 MCCD1P59942 119 aaPredicted RBP24.37■■□□□ 1.49
SNF8-209ENST00000510558 ZXDBP98169 803 aa24.37■■□□□ 1.49
SNF8-209ENST00000510558 AMPD2Q01433 879 aa24.37■■□□□ 1.49
SNF8-209ENST00000510558 INCA1Q0VD86 236 aa24.37■■□□□ 1.49
SNF8-209ENST00000510558 TMEM196Q5HYL7 178 aa24.37■■□□□ 1.49
SNF8-209ENST00000510558 SYNPOQ8N3V7 929 aa24.37■■□□□ 1.49
SNF8-209ENST00000510558 SLC2A14Q8TDB8 520 aa24.37■■□□□ 1.49
SNF8-209ENST00000510558 FBXO32Q969P5 355 aa24.37■■□□□ 1.49
SNF8-209ENST00000510558 NIF3L1Q9GZT8 377 aa24.37■■□□□ 1.49
SNF8-209ENST00000510558 RNF38Q9H0F5 515 aa24.37■■□□□ 1.49
SNF8-209ENST00000510558 CYP3A43Q9HB55 503 aa24.37■■□□□ 1.49
SNF8-209ENST00000510558 FAM49BQ9NUQ9 324 aa24.37■■□□□ 1.49
SNF8-209ENST00000510558 HOOK1Q9UJC3 728 aaKnown RBP24.37■■□□□ 1.49
SNF8-209ENST00000510558 EP300Q09472 2414 aaPredicted RBP24.37■■□□□ 1.49
SNF8-209ENST00000510558 OTOGLQ3ZCN5 2332 aa24.36■■□□□ 1.49
SNF8-209ENST00000510558 MYO16Q9Y6X6 1858 aa24.36■■□□□ 1.49
SNF8-209ENST00000510558 LEFTY2O00292 366 aa24.36■■□□□ 1.49
SNF8-209ENST00000510558 TRDMT1O14717 391 aaKnown RBP24.36■■□□□ 1.49
SNF8-209ENST00000510558 TNFRSF10BO14763 440 aa24.36■■□□□ 1.49
SNF8-209ENST00000510558 GJA4P35212 333 aa24.36■■□□□ 1.49
SNF8-209ENST00000510558 SLC5A3P53794 718 aa24.36■■□□□ 1.49
SNF8-209ENST00000510558 SLC7A9P82251 487 aa24.36■■□□□ 1.49
SNF8-209ENST00000510558 GRSF1Q12849 480 aaKnown RBP eCLIP24.36■■□□□ 1.491e-7■■■□□ 16.4
SNF8-209ENST00000510558 EML3Q32P44 896 aa24.36■■□□□ 1.49
SNF8-209ENST00000510558 KRT39Q6A163 491 aa24.36■■□□□ 1.49
SNF8-209ENST00000510558 FSTL4Q6MZW2 842 aa24.36■■□□□ 1.49
SNF8-209ENST00000510558 C12orf29Q8N999 325 aa24.36■■□□□ 1.49
SNF8-209ENST00000510558 CCDC150Q8NCX0 1101 aa24.36■■□□□ 1.49
SNF8-209ENST00000510558 PDZD8Q8NEN9 1154 aa24.36■■□□□ 1.49
SNF8-209ENST00000510558 ZMIZ2Q8NF64 920 aa24.36■■□□□ 1.49
SNF8-209ENST00000510558 SCAMP5Q8TAC9 235 aa24.36■■□□□ 1.49
SNF8-209ENST00000510558 OVCA2Q8WZ82 227 aa24.36■■□□□ 1.49
SNF8-209ENST00000510558 TSG101Q99816 390 aa24.36■■□□□ 1.49
SNF8-209ENST00000510558 SMOQ99835 787 aa24.36■■□□□ 1.49
SNF8-209ENST00000510558 CFAP54Q96N23 3096 aa24.35■■□□□ 1.49
SNF8-209ENST00000510558 TRIM21P19474 475 aaKnown RBP24.35■■□□□ 1.49
SNF8-209ENST00000510558 TWNKQ96RR1 684 aa24.35■■□□□ 1.49
SNF8-209ENST00000510558 LINC00597Q9H2U6 94 aa24.35■■□□□ 1.49
SNF8-209ENST00000510558 IL37Q9NZH6 218 aa24.35■■□□□ 1.49
SNF8-209ENST00000510558 CPQQ9Y646 472 aa24.35■■□□□ 1.49
SNF8-209ENST00000510558 BEST1O76090 585 aa24.34■■□□□ 1.49
SNF8-209ENST00000510558 PAPSS2O95340 614 aaPredicted RBP24.34■■□□□ 1.49
SNF8-209ENST00000510558 MXI1P50539 228 aa24.34■■□□□ 1.49
SNF8-209ENST00000510558 ZC3H3Q8IXZ2 948 aaKnown RBP24.34■■□□□ 1.49
SNF8-209ENST00000510558 HINFPQ9BQA5 517 aa24.34■■□□□ 1.49
SNF8-209ENST00000510558 NT5C1AQ9BXI3 368 aa24.34■■□□□ 1.49
SNF8-209ENST00000510558 GTPBP4Q9BZE4 634 aaKnown RBP24.34■■□□□ 1.49
SNF8-209ENST00000510558 EPC1Q9H2F5 836 aa24.34■■□□□ 1.49
SNF8-209ENST00000510558 CSNK1G1Q9HCP0 422 aa24.34■■□□□ 1.49
SNF8-209ENST00000510558 C2orf42Q9NWW7 574 aa24.34■■□□□ 1.49
SNF8-209ENST00000510558 COMMD8Q9NX08 183 aa24.34■■□□□ 1.49
SNF8-209ENST00000510558 SMPD4Q9NXE4 827 aa24.34■■□□□ 1.49
SNF8-209ENST00000510558 STX10O60499 249 aa24.33■■□□□ 1.49
SNF8-209ENST00000510558 CILPO75339 1184 aa24.33■■□□□ 1.49
SNF8-209ENST00000510558 FAM200BP0CF97 657 aa24.33■■□□□ 1.49
SNF8-209ENST00000510558 CD58P19256 250 aa24.33■■□□□ 1.49
SNF8-209ENST00000510558 ADORA2BP29275 332 aa24.33■■□□□ 1.49
SNF8-209ENST00000510558 GALK1P51570 392 aa24.33■■□□□ 1.49
SNF8-209ENST00000510558 PMS1P54277 932 aaKnown RBP24.33■■□□□ 1.49
SNF8-209ENST00000510558 MAP3K7CLP57077 242 aa24.33■■□□□ 1.49
SNF8-209ENST00000510558 FKBP3Q00688 224 aaKnown RBP24.33■■□□□ 1.49
SNF8-209ENST00000510558 NAIF1Q69YI7 327 aaPredicted RBP24.33■■□□□ 1.49
SNF8-209ENST00000510558 ANKRD40Q6AI12 368 aa24.33■■□□□ 1.49
SNF8-209ENST00000510558 FBXL13Q8NEE6 735 aa24.33■■□□□ 1.49
SNF8-209ENST00000510558 RUBCNQ92622 972 aa24.33■■□□□ 1.49
SNF8-209ENST00000510558 SEMA4DQ92854 862 aa24.33■■□□□ 1.49
SNF8-209ENST00000510558 EXOC4Q96A65 974 aa24.33■■□□□ 1.49
SNF8-209ENST00000510558 P2RY13Q9BPV8 354 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms