RNA–Protein interactions for RNA: ENST00000510245.1

CAST-231, Transcript of calpastatin, human

TSL 4

Gene CAST, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-231	ENST00000510245	COQ6	Q9Y2Z9	468 aa		8.5	□□□□□ -1.05
CAST-231	ENST00000510245	TICRR	Q7Z2Z1	1910 aa		8.5	□□□□□ -1.05
CAST-231	ENST00000510245	SPAAR	A0A1B0GVQ0	90 aa		8.49	□□□□□ -1.05
CAST-231	ENST00000510245	MBLAC1	A4D2B0	266 aa	Predicted RBP	8.49	□□□□□ -1.05
CAST-231	ENST00000510245	PYCARD-AS1	I3L0S3	204 aa		8.49	□□□□□ -1.05
CAST-231	ENST00000510245	MAN2B1	O00754	1011 aa		8.49	□□□□□ -1.05
CAST-231	ENST00000510245	NRDC	O43847	1150 aa		8.49	□□□□□ -1.05
CAST-231	ENST00000510245	RPS6KA5	O75582	802 aa		8.49	□□□□□ -1.05
CAST-231	ENST00000510245	RFPL2	O75678	378 aa		8.49	□□□□□ -1.05
CAST-231	ENST00000510245	SURF6	O75683	361 aa	Known RBP	8.49	□□□□□ -1.05
CAST-231	ENST00000510245	RPP40	O75818	363 aa	Known RBP	8.49	□□□□□ -1.05
CAST-231	ENST00000510245	GNAI2	P04899	355 aa		8.49	□□□□□ -1.05
CAST-231	ENST00000510245	C8A	P07357	584 aa		8.49	□□□□□ -1.05
CAST-231	ENST00000510245	CNP	P09543	421 aa	Known RBP	8.49	□□□□□ -1.05
CAST-231	ENST00000510245	CCDC192	P0DO97	292 aa		8.49	□□□□□ -1.05
CAST-231	ENST00000510245	BCL6	P41182	706 aa		8.49	□□□□□ -1.05
CAST-231	ENST00000510245	CDKN1C	P49918	316 aa	Predicted RBP	8.49	□□□□□ -1.05
CAST-231	ENST00000510245	SP4	Q02446	784 aa		8.49	□□□□□ -1.05
CAST-231	ENST00000510245	CT47A1	Q5JQC4	288 aa	Predicted RBP	8.49	□□□□□ -1.05
CAST-231	ENST00000510245	ODR4	Q5SWX8	454 aa		8.49	□□□□□ -1.05
CAST-231	ENST00000510245	AACS	Q86V21	672 aa		8.49	□□□□□ -1.05
CAST-231	ENST00000510245	KBTBD6	Q86V97	674 aa		8.49	□□□□□ -1.05
CAST-231	ENST00000510245	RNF169	Q8NCN4	708 aa		8.49	□□□□□ -1.05
CAST-231	ENST00000510245	LSM14A	Q8ND56	463 aa	Known RBP	8.49	□□□□□ -1.05
CAST-231	ENST00000510245	MDM1	Q8TC05	714 aa		8.49	□□□□□ -1.05
CAST-231	ENST00000510245	TBC1D5	Q92609	795 aa		8.49	□□□□□ -1.05
CAST-231	ENST00000510245	ZFYVE21	Q9BQ24	234 aa		8.49	□□□□□ -1.05
CAST-231	ENST00000510245	MAF1	Q9H063	256 aa		8.49	□□□□□ -1.05
CAST-231	ENST00000510245	LMAN1L	Q9HAT1	526 aa		8.49	□□□□□ -1.05
CAST-231	ENST00000510245	JADE2	Q9NQC1	790 aa		8.49	□□□□□ -1.05
CAST-231	ENST00000510245	GULP1	Q9UBP9	304 aa		8.49	□□□□□ -1.05
CAST-231	ENST00000510245	CDH7	Q9ULB5	785 aa		8.49	□□□□□ -1.05
CAST-231	ENST00000510245	RALGAPA1	Q6GYQ0	2036 aa		8.49	□□□□□ -1.05
CAST-231	ENST00000510245	LOXHD1	Q8IVV2	1947 aa		8.48	□□□□□ -1.05
CAST-231	ENST00000510245	LNP1	A1A4G5	178 aa		8.48	□□□□□ -1.05
CAST-231	ENST00000510245	NOTO	A8MTQ0	251 aa		8.48	□□□□□ -1.05
CAST-231	ENST00000510245	FADS2P1	A8MWK0	482 aa		8.48	□□□□□ -1.05
CAST-231	ENST00000510245	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	8.48	□□□□□ -1.05
CAST-231	ENST00000510245	ZC3H11A	O75152	810 aa	Known RBP eCLIP	8.48	□□□□□ -1.05
CAST-231	ENST00000510245	GLUD1	P00367	558 aa		8.48	□□□□□ -1.05
CAST-231	ENST00000510245	HSPD1	P10809	573 aa	Known RBP	8.48	□□□□□ -1.05
CAST-231	ENST00000510245	FPR2	P25090	351 aa		8.48	□□□□□ -1.05
CAST-231	ENST00000510245	MARK3	P27448	753 aa		8.48	□□□□□ -1.05
CAST-231	ENST00000510245	SOX5	P35711	763 aa		8.48	□□□□□ -1.05
CAST-231	ENST00000510245	TDO2	P48775	406 aa		8.48	□□□□□ -1.05
CAST-231	ENST00000510245	MESP2	Q0VG99	397 aa		8.48	□□□□□ -1.05
CAST-231	ENST00000510245	KIR3DS1	Q14943	382 aa		8.48	□□□□□ -1.05
CAST-231	ENST00000510245	ZNF124	Q15973	351 aa		8.48	□□□□□ -1.05
CAST-231	ENST00000510245	PIK3R6	Q5UE93	754 aa		8.48	□□□□□ -1.05
CAST-231	ENST00000510245	IQCE	Q6IPM2	695 aa		8.48	□□□□□ -1.05
CAST-231	ENST00000510245	METTL7B	Q6UX53	244 aa		8.48	□□□□□ -1.05
CAST-231	ENST00000510245	WDR5B	Q86VZ2	330 aa		8.48	□□□□□ -1.05
CAST-231	ENST00000510245	ZC3H7A	Q8IWR0	971 aa	Known RBP	8.48	□□□□□ -1.05
CAST-231	ENST00000510245	SPEM1	Q8N4L4	309 aa		8.48	□□□□□ -1.05
CAST-231	ENST00000510245	PCDH19	Q8TAB3	1148 aa		8.48	□□□□□ -1.05
CAST-231	ENST00000510245	GAB3	Q8WWW8	586 aa		8.48	□□□□□ -1.05
CAST-231	ENST00000510245	ZNF707	Q96C28	371 aa	Predicted RBP	8.48	□□□□□ -1.05
CAST-231	ENST00000510245	ZBTB10	Q96DT7	871 aa		8.48	□□□□□ -1.05
CAST-231	ENST00000510245	INTS4	Q96HW7	963 aa	Known RBP	8.48	□□□□□ -1.05
CAST-231	ENST00000510245	MRPL9	Q9BYD2	267 aa	Known RBP	8.48	□□□□□ -1.05
CAST-231	ENST00000510245	API5	Q9BZZ5	524 aa	Known RBP	8.48	□□□□□ -1.05
CAST-231	ENST00000510245	IPPK	Q9H8X2	491 aa		8.48	□□□□□ -1.05
CAST-231	ENST00000510245	TCP11L1	Q9NUJ3	509 aa		8.48	□□□□□ -1.05
CAST-231	ENST00000510245	MAPRE3	Q9UPY8	281 aa		8.48	□□□□□ -1.05
CAST-231	ENST00000510245	GREB1	Q4ZG55	1949 aa		8.48	□□□□□ -1.05
CAST-231	ENST00000510245	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	8.47	□□□□□ -1.05
CAST-231	ENST00000510245	TEX15	Q9BXT5	2789 aa		8.47	□□□□□ -1.05
CAST-231	ENST00000510245	TRBV23OR9-2	A0A075B6M9	112 aa		8.47	□□□□□ -1.05
CAST-231	ENST00000510245	ENO4	A6NNW6	628 aa		8.47	□□□□□ -1.05
CAST-231	ENST00000510245		K7ESF4	209 aa		8.47	□□□□□ -1.05
CAST-231	ENST00000510245	PPP1R11	O60927	126 aa	Predicted RBP	8.47	□□□□□ -1.05
CAST-231	ENST00000510245	CAVIN2	O95810	425 aa		8.47	□□□□□ -1.05
CAST-231	ENST00000510245	EFEMP2	O95967	443 aa		8.47	□□□□□ -1.05
CAST-231	ENST00000510245	ABCG1	P45844	678 aa		8.47	□□□□□ -1.05
CAST-231	ENST00000510245	FAM189B	P81408	668 aa		8.47	□□□□□ -1.05
CAST-231	ENST00000510245	CFHR1	Q03591	330 aa		8.47	□□□□□ -1.05
CAST-231	ENST00000510245	NEDD9	Q14511	834 aa		8.47	□□□□□ -1.05
CAST-231	ENST00000510245	MARCH8	Q5T0T0	291 aa		8.47	□□□□□ -1.05
CAST-231	ENST00000510245	CDCA2	Q69YH5	1023 aa	Predicted RBP	8.47	□□□□□ -1.05
CAST-231	ENST00000510245	ZCCHC8	Q6NZY4	707 aa	Known RBP	8.47	□□□□□ -1.05
CAST-231	ENST00000510245	GALNT18	Q6P9A2	607 aa		8.47	□□□□□ -1.05
CAST-231	ENST00000510245	SYDE1	Q6ZW31	735 aa	Predicted RBP	8.47	□□□□□ -1.05
CAST-231	ENST00000510245	SLCO6A1	Q86UG4	719 aa		8.47	□□□□□ -1.05
CAST-231	ENST00000510245	NLRX1	Q86UT6	975 aa		8.47	□□□□□ -1.05
CAST-231	ENST00000510245	TMEM173	Q86WV6	379 aa	Predicted RBP	8.47	□□□□□ -1.05
CAST-231	ENST00000510245	TEX2	Q8IWB9	1127 aa		8.47	□□□□□ -1.05
CAST-231	ENST00000510245	PPM1K	Q8N3J5	372 aa		8.47	□□□□□ -1.05
CAST-231	ENST00000510245	IGSF22	Q8N9C0	903 aa		8.47	□□□□□ -1.05
CAST-231	ENST00000510245	FBXO15	Q8NCQ5	510 aa	Predicted RBP	8.47	□□□□□ -1.05
CAST-231	ENST00000510245	IGSF21	Q96ID5	467 aa		8.47	□□□□□ -1.05
CAST-231	ENST00000510245	PDCD2L	Q9BRP1	358 aa		8.47	□□□□□ -1.05
CAST-231	ENST00000510245	MRPL17	Q9NRX2	175 aa	Known RBP	8.47	□□□□□ -1.05
CAST-231	ENST00000510245	SAMD15	Q9P1V8	674 aa		8.47	□□□□□ -1.05
CAST-231	ENST00000510245	FBLN5	Q9UBX5	448 aa		8.47	□□□□□ -1.05
CAST-231	ENST00000510245	ST3GAL5	Q9UNP4	418 aa		8.47	□□□□□ -1.05
CAST-231	ENST00000510245	TAF6L	Q9Y6J9	622 aa		8.47	□□□□□ -1.05
CAST-231	ENST00000510245	ABCB11	O95342	1321 aa		8.47	□□□□□ -1.05
CAST-231	ENST00000510245	LAMA4	Q16363	1823 aa		8.47	□□□□□ -1.05
CAST-231	ENST00000510245	C2orf16	Q68DN1	1984 aa		8.46	□□□□□ -1.05
CAST-231	ENST00000510245	KRTAP9-6	A0A140TA67	174 aa		8.46	□□□□□ -1.06

Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms