RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 A0A0U1RQF3 1178 aa16.84■□□□□ 0.29
SQSTM1-213ENST00000510187 TMEM120BA0PK00 339 aa16.84■□□□□ 0.29
SQSTM1-213ENST00000510187 CDH16O75309 829 aa16.84■□□□□ 0.29
SQSTM1-213ENST00000510187 PARNO95453 639 aaKnown RBP16.84■□□□□ 0.29
SQSTM1-213ENST00000510187 TNNC2P02585 160 aa16.84■□□□□ 0.29
SQSTM1-213ENST00000510187 IBSPP21815 317 aaPredicted RBP16.84■□□□□ 0.29
SQSTM1-213ENST00000510187 MMP8P22894 467 aa16.84■□□□□ 0.29
SQSTM1-213ENST00000510187 KLRC2P26717 231 aa16.84■□□□□ 0.29
SQSTM1-213ENST00000510187 TAP1Q03518 808 aa16.84■□□□□ 0.29
SQSTM1-213ENST00000510187 NCOA4Q13772 614 aa16.84■□□□□ 0.29
SQSTM1-213ENST00000510187 TMEM132DQ14C87 1099 aa16.84■□□□□ 0.29
SQSTM1-213ENST00000510187 SPRED3Q2MJR0 410 aa16.84■□□□□ 0.29
SQSTM1-213ENST00000510187 PLEKHG4Q58EX7 1191 aa16.84■□□□□ 0.29
SQSTM1-213ENST00000510187 IZUMO3Q5VZ72 239 aa16.84■□□□□ 0.29
SQSTM1-213ENST00000510187 HIBCHQ6NVY1 386 aaPredicted RBP16.84■□□□□ 0.29
SQSTM1-213ENST00000510187 ZCCHC9Q8N567 271 aaKnown RBP16.84■□□□□ 0.29
SQSTM1-213ENST00000510187 DBF4BQ8NFT6 615 aa16.84■□□□□ 0.29
SQSTM1-213ENST00000510187 SGSM3Q96HU1 749 aa16.84■□□□□ 0.29
SQSTM1-213ENST00000510187 FTHL17Q9BXU8 183 aa16.84■□□□□ 0.29
SQSTM1-213ENST00000510187 PRDM5Q9NQX1 630 aaPredicted RBP16.84■□□□□ 0.29
SQSTM1-213ENST00000510187 KLK14Q9P0G3 267 aa16.84■□□□□ 0.29
SQSTM1-213ENST00000510187 SLC12A4Q9UP95 1085 aa16.84■□□□□ 0.29
SQSTM1-213ENST00000510187 C2CD2Q9Y426 696 aa16.84■□□□□ 0.29
SQSTM1-213ENST00000510187 CHUKO15111 745 aa16.84■□□□□ 0.29
SQSTM1-213ENST00000510187 SNX3O60493 162 aa16.84■□□□□ 0.29
SQSTM1-213ENST00000510187 MNAT1P51948 309 aa16.84■□□□□ 0.29
SQSTM1-213ENST00000510187 ALKAL1Q6UXT8 129 aa16.84■□□□□ 0.29
SQSTM1-213ENST00000510187 FUKQ8N0W3 1084 aa16.84■□□□□ 0.29
SQSTM1-213ENST00000510187 DYDC1Q8WWB3 177 aa16.84■□□□□ 0.29
SQSTM1-213ENST00000510187 SEPT8Q92599 483 aa16.84■□□□□ 0.29
SQSTM1-213ENST00000510187 KIF12Q96FN5 646 aa16.84■□□□□ 0.29
SQSTM1-213ENST00000510187 ZNF518BQ9C0D4 1074 aa16.84■□□□□ 0.29
SQSTM1-213ENST00000510187 CXCL16Q9H2A7 254 aa16.84■□□□□ 0.29
SQSTM1-213ENST00000510187 RGS18Q9NS28 235 aa16.84■□□□□ 0.29
SQSTM1-213ENST00000510187 CNTN3Q9P232 1028 aa16.84■□□□□ 0.29
SQSTM1-213ENST00000510187 NUB1Q9Y5A7 615 aa16.84■□□□□ 0.29
SQSTM1-213ENST00000510187 ZNF623O75123 536 aa16.83■□□□□ 0.28
SQSTM1-213ENST00000510187 SKIP12755 728 aa16.83■□□□□ 0.28
SQSTM1-213ENST00000510187 NR1H3Q13133 447 aa16.83■□□□□ 0.28
SQSTM1-213ENST00000510187 LLGL1Q15334 1064 aa16.83■□□□□ 0.28
SQSTM1-213ENST00000510187 TRIP13Q15645 432 aaPredicted RBP16.83■□□□□ 0.28
SQSTM1-213ENST00000510187 KYNUQ16719 465 aa16.83■□□□□ 0.28
SQSTM1-213ENST00000510187 CCDC38Q502W7 563 aa16.83■□□□□ 0.28
SQSTM1-213ENST00000510187 GLRA4Q5JXX5 417 aa16.83■□□□□ 0.28
SQSTM1-213ENST00000510187 LLGL2Q6P1M3 1020 aa16.83■□□□□ 0.28
SQSTM1-213ENST00000510187 CYB5D1Q6P9G0 228 aa16.83■□□□□ 0.28
SQSTM1-213ENST00000510187 TRPM8Q7Z2W7 1104 aa16.83■□□□□ 0.28
SQSTM1-213ENST00000510187 MRPL10Q7Z7H8 261 aaKnown RBP16.83■□□□□ 0.28
SQSTM1-213ENST00000510187 RTN4RL1Q86UN2 441 aaPredicted RBP16.83■□□□□ 0.28
SQSTM1-213ENST00000510187 NT5DC4Q86YG4 428 aa16.83■□□□□ 0.28
SQSTM1-213ENST00000510187 PASD1Q8IV76 773 aa16.83■□□□□ 0.28
SQSTM1-213ENST00000510187 RNF169Q8NCN4 708 aa16.83■□□□□ 0.28
SQSTM1-213ENST00000510187 MAGEC3Q8TD91 643 aa16.83■□□□□ 0.28
SQSTM1-213ENST00000510187 CKAP2Q8WWK9 683 aa16.83■□□□□ 0.28
SQSTM1-213ENST00000510187 APBB2Q92870 758 aa16.83■□□□□ 0.28
SQSTM1-213ENST00000510187 LPPQ93052 612 aa16.83■□□□□ 0.28
SQSTM1-213ENST00000510187 TTC25Q96NG3 672 aa16.83■□□□□ 0.28
SQSTM1-213ENST00000510187 ELAC2Q9BQ52 826 aaKnown RBP16.83■□□□□ 0.28
SQSTM1-213ENST00000510187 HEMGNQ9BXL5 484 aa16.83■□□□□ 0.28
SQSTM1-213ENST00000510187 CFAP73A6NFT4 308 aa16.82■□□□□ 0.28
SQSTM1-213ENST00000510187 TMEM191CA6NGB0 347 aa16.82■□□□□ 0.28
SQSTM1-213ENST00000510187 MEIS3P2A8K0S8 358 aa16.82■□□□□ 0.28
SQSTM1-213ENST00000510187 VGLL3A8MV65 326 aa16.82■□□□□ 0.28
SQSTM1-213ENST00000510187 LIASO43766 372 aa16.82■□□□□ 0.28
SQSTM1-213ENST00000510187 TJP3O95049 919 aa16.82■□□□□ 0.28
SQSTM1-213ENST00000510187 ASS1P00966 412 aaKnown RBP16.82■□□□□ 0.28
SQSTM1-213ENST00000510187 CFHP08603 1231 aa16.82■□□□□ 0.28
SQSTM1-213ENST00000510187 IFNAR2P48551 515 aa16.82■□□□□ 0.28
SQSTM1-213ENST00000510187 PPP1R21Q6ZMI0 780 aa16.82■□□□□ 0.28
SQSTM1-213ENST00000510187 SLC24A5Q71RS6 500 aa16.82■□□□□ 0.28
SQSTM1-213ENST00000510187 DEFB128Q7Z7B8 93 aa16.82■□□□□ 0.28
SQSTM1-213ENST00000510187 PHLDB2Q86SQ0 1253 aa16.82■□□□□ 0.28
SQSTM1-213ENST00000510187 LINC01599Q8WXQ3 324 aa16.82■□□□□ 0.28
SQSTM1-213ENST00000510187 ZMAT2Q96NC0 199 aaKnown RBP16.82■□□□□ 0.28
SQSTM1-213ENST00000510187 SLITRK1Q96PX8 696 aa16.82■□□□□ 0.28
SQSTM1-213ENST00000510187 TSPYL2Q9H2G4 693 aaPredicted RBP16.82■□□□□ 0.28
SQSTM1-213ENST00000510187 PPCSQ9HAB8 311 aa16.82■□□□□ 0.28
SQSTM1-213ENST00000510187 RNF19AQ9NV58 838 aa16.82■□□□□ 0.28
SQSTM1-213ENST00000510187 DERAQ9Y315 318 aa16.82■□□□□ 0.28
SQSTM1-213ENST00000510187 USP15Q9Y4E8 981 aaPredicted RBP16.82■□□□□ 0.28
SQSTM1-213ENST00000510187 TCRBV5S1A1TA0A578 114 aa16.82■□□□□ 0.28
SQSTM1-213ENST00000510187 TRIM43BA6NCK2 446 aa16.82■□□□□ 0.28
SQSTM1-213ENST00000510187 O00370 1275 aa16.82■□□□□ 0.28
SQSTM1-213ENST00000510187 CXCL10P02778 98 aa16.82■□□□□ 0.28
SQSTM1-213ENST00000510187 TRPC3Q13507 836 aa16.82■□□□□ 0.28
SQSTM1-213ENST00000510187 C2CD6Q53TS8 623 aa16.82■□□□□ 0.28
SQSTM1-213ENST00000510187 XKR4Q5GH76 650 aa16.82■□□□□ 0.28
SQSTM1-213ENST00000510187 AGMOQ6ZNB7 445 aa16.82■□□□□ 0.28
SQSTM1-213ENST00000510187 ARHGEF18Q6ZSZ5 1173 aa16.82■□□□□ 0.28
SQSTM1-213ENST00000510187 ECHDC2Q86YB7 292 aa16.82■□□□□ 0.28
SQSTM1-213ENST00000510187 TDRPQ86YL5 185 aa16.82■□□□□ 0.28
SQSTM1-213ENST00000510187 PARP9Q8IXQ6 854 aa16.82■□□□□ 0.28
SQSTM1-213ENST00000510187 NIPA2Q8N8Q9 360 aa16.82■□□□□ 0.28
SQSTM1-213ENST00000510187 GBP7Q8N8V2 638 aaPredicted RBP16.82■□□□□ 0.28
SQSTM1-213ENST00000510187 ZNF606Q8WXB4 792 aa16.82■□□□□ 0.28
SQSTM1-213ENST00000510187 TRIM43Q96BQ3 446 aaPredicted RBP16.82■□□□□ 0.28
SQSTM1-213ENST00000510187 PGBD4Q96DM1 585 aa16.82■□□□□ 0.28
SQSTM1-213ENST00000510187 CFAP57Q96MR6 1250 aa16.82■□□□□ 0.28
SQSTM1-213ENST00000510187 UBN1Q9NPG3 1134 aa16.82■□□□□ 0.28
SQSTM1-213ENST00000510187 HAUS2Q9NVX0 235 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms