RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 ADGRG2Q8IZP9 1017 aa13.3□□□□□ -0.28
PDPN-208ENST00000509009 NUP93Q8N1F7 819 aa13.3□□□□□ -0.28
PDPN-208ENST00000509009 EZH1Q92800 747 aaPredicted RBP13.3□□□□□ -0.28
PDPN-208ENST00000509009 CD101Q93033 1021 aa13.3□□□□□ -0.28
PDPN-208ENST00000509009 ATP2A3Q93084 1043 aa13.3□□□□□ -0.28
PDPN-208ENST00000509009 KCNK16Q96T55 309 aa13.3□□□□□ -0.28
PDPN-208ENST00000509009 ELOVL4Q9GZR5 314 aa13.3□□□□□ -0.28
PDPN-208ENST00000509009 USP18Q9UMW8 372 aa13.3□□□□□ -0.28
PDPN-208ENST00000509009 CCDC163A0A0D9SF12 145 aa13.29□□□□□ -0.28
PDPN-208ENST00000509009 PRR5-ARHGAP8B1AHC4 643 aa13.29□□□□□ -0.28
PDPN-208ENST00000509009 IKBKBO14920 756 aa13.29□□□□□ -0.28
PDPN-208ENST00000509009 OLFM2O95897 454 aa13.29□□□□□ -0.28
PDPN-208ENST00000509009 ABL1P00519 1130 aa13.29□□□□□ -0.28
PDPN-208ENST00000509009 OAS1P00973 400 aaKnown RBP13.29□□□□□ -0.28
PDPN-208ENST00000509009 SDHBP21912 280 aa13.29□□□□□ -0.28
PDPN-208ENST00000509009 YWHAQP27348 245 aa13.29□□□□□ -0.28
PDPN-208ENST00000509009 RAP1GAPP47736 663 aa13.29□□□□□ -0.28
PDPN-208ENST00000509009 ATXN1P54253 815 aaKnown RBP13.29□□□□□ -0.28
PDPN-208ENST00000509009 ARHGAP8P85298 464 aa13.29□□□□□ -0.28
PDPN-208ENST00000509009 LMNB2Q03252 620 aa13.29□□□□□ -0.28
PDPN-208ENST00000509009 FBXO43Q4G163 708 aa13.29□□□□□ -0.28
PDPN-208ENST00000509009 SV2AQ7L0J3 742 aa13.29□□□□□ -0.28
PDPN-208ENST00000509009 CRYBG2Q8N1P7 616 aa13.29□□□□□ -0.28
PDPN-208ENST00000509009 KIAA1958Q8N8K9 716 aa13.29□□□□□ -0.28
PDPN-208ENST00000509009 EXOC4Q96A65 974 aa13.29□□□□□ -0.28
PDPN-208ENST00000509009 SLITRK1Q96PX8 696 aa13.29□□□□□ -0.28
PDPN-208ENST00000509009 IL37Q9NZH6 218 aa13.29□□□□□ -0.28
PDPN-208ENST00000509009 CHORDC1Q9UHD1 332 aaPredicted RBP13.29□□□□□ -0.28
PDPN-208ENST00000509009 SLC8A2Q9UPR5 921 aa13.29□□□□□ -0.28
PDPN-208ENST00000509009 TRAF3IP3Q9Y228 551 aa13.29□□□□□ -0.28
PDPN-208ENST00000509009 OBSL1O75147 1896 aa13.28□□□□□ -0.28
PDPN-208ENST00000509009 TNFRSF10BO14763 440 aa13.28□□□□□ -0.28
PDPN-208ENST00000509009 LRP3O75074 770 aa13.28□□□□□ -0.28
PDPN-208ENST00000509009 RHOBTB3O94955 611 aa13.28□□□□□ -0.28
PDPN-208ENST00000509009 RTN3O95197 1032 aaPredicted RBP13.28□□□□□ -0.28
PDPN-208ENST00000509009 PRR29P0C7W0 189 aa13.28□□□□□ -0.28
PDPN-208ENST00000509009 OPRD1P41143 372 aa13.28□□□□□ -0.28
PDPN-208ENST00000509009 GAB4Q2WGN9 574 aa13.28□□□□□ -0.28
PDPN-208ENST00000509009 CEP135Q66GS9 1140 aa13.28□□□□□ -0.28
PDPN-208ENST00000509009 CEP68Q76N32 757 aa13.28□□□□□ -0.28
PDPN-208ENST00000509009 ACOT1Q86TX2 421 aa13.28□□□□□ -0.28
PDPN-208ENST00000509009 FUKQ8N0W3 1084 aa13.28□□□□□ -0.28
PDPN-208ENST00000509009 CAMKK1Q8N5S9 505 aa13.28□□□□□ -0.28
PDPN-208ENST00000509009 FAM160A2Q8N612 972 aaPredicted RBP13.28□□□□□ -0.28
PDPN-208ENST00000509009 SCAMP5Q8TAC9 235 aa13.28□□□□□ -0.28
PDPN-208ENST00000509009 TAF4BQ92750 862 aa13.28□□□□□ -0.28
PDPN-208ENST00000509009 TNIP3Q96KP6 325 aa13.28□□□□□ -0.28
PDPN-208ENST00000509009 MED10Q9BTT4 135 aa13.28□□□□□ -0.28
PDPN-208ENST00000509009 FRMD4BQ9Y2L6 1034 aa13.28□□□□□ -0.28
PDPN-208ENST00000509009 CPQQ9Y646 472 aa13.28□□□□□ -0.28
PDPN-208ENST00000509009 GREB1Q4ZG55 1949 aa13.28□□□□□ -0.28
PDPN-208ENST00000509009 ANAPC1Q9H1A4 1944 aa13.28□□□□□ -0.28
PDPN-208ENST00000509009 DNAH14Q0VDD8 3507 aa13.28□□□□□ -0.28
PDPN-208ENST00000509009 A0A1W2PQ27 194 aa13.27□□□□□ -0.29
PDPN-208ENST00000509009 A0A1W2PQ64 194 aa13.27□□□□□ -0.29
PDPN-208ENST00000509009 A0A1W2PQD8 194 aa13.27□□□□□ -0.29
PDPN-208ENST00000509009 MED19A0JLT2 244 aaPredicted RBP13.27□□□□□ -0.29
PDPN-208ENST00000509009 MAPK13O15264 365 aa13.27□□□□□ -0.29
PDPN-208ENST00000509009 CALUO43852 315 aaPredicted RBP13.27□□□□□ -0.29
PDPN-208ENST00000509009 NFATC1O95644 943 aa13.27□□□□□ -0.29
PDPN-208ENST00000509009 ASS1P00966 412 aaKnown RBP13.27□□□□□ -0.29
PDPN-208ENST00000509009 HLA-DRAP01903 254 aa13.27□□□□□ -0.29
PDPN-208ENST00000509009 P4HA1P13674 534 aa13.27□□□□□ -0.29
PDPN-208ENST00000509009 DPYDQ12882 1025 aa13.27□□□□□ -0.29
PDPN-208ENST00000509009 IFRD2Q12894 506 aaPredicted RBP13.27□□□□□ -0.29
PDPN-208ENST00000509009 SNX30Q5VWJ9 437 aa13.27□□□□□ -0.29
PDPN-208ENST00000509009 SCARA5Q6ZMJ2 495 aa13.27□□□□□ -0.29
PDPN-208ENST00000509009 KRBA2Q6ZNG9 492 aa13.27□□□□□ -0.29
PDPN-208ENST00000509009 SYT13Q7L8C5 426 aa13.27□□□□□ -0.29
PDPN-208ENST00000509009 FILIP1Q7Z7B0 1213 aa13.27□□□□□ -0.29
PDPN-208ENST00000509009 FAM35AQ86V20 835 aa13.27□□□□□ -0.29
PDPN-208ENST00000509009 RPLP0P6Q8NHW5 317 aa13.27□□□□□ -0.29
PDPN-208ENST00000509009 GAB3Q8WWW8 586 aa13.27□□□□□ -0.29
PDPN-208ENST00000509009 OVCA2Q8WZ82 227 aa13.27□□□□□ -0.29
PDPN-208ENST00000509009 FBXO32Q969P5 355 aa13.27□□□□□ -0.29
PDPN-208ENST00000509009 CCDC47Q96A33 483 aaKnown RBP13.27□□□□□ -0.29
PDPN-208ENST00000509009 SCAND2PQ9GZW5 306 aaPredicted RBP13.27□□□□□ -0.29
PDPN-208ENST00000509009 SEMA4GQ9NTN9 838 aa13.27□□□□□ -0.29
PDPN-208ENST00000509009 COMMD8Q9NX08 183 aa13.27□□□□□ -0.29
PDPN-208ENST00000509009 SMPD4Q9NXE4 827 aa13.27□□□□□ -0.29
PDPN-208ENST00000509009 CFAP97Q9P2B7 532 aa13.27□□□□□ -0.29
PDPN-208ENST00000509009 MAPK8IP1Q9UQF2 711 aa13.27□□□□□ -0.29
PDPN-208ENST00000509009 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.27□□□□□ -0.29
PDPN-208ENST00000509009 FAM92AA1XBS5 289 aa13.26□□□□□ -0.29
PDPN-208ENST00000509009 ANTXRLA6NF34 631 aa13.26□□□□□ -0.29
PDPN-208ENST00000509009 K7EQS6 105 aa13.26□□□□□ -0.29
PDPN-208ENST00000509009 SLC9A3R1O14745 358 aaPredicted RBP13.26□□□□□ -0.29
PDPN-208ENST00000509009 ATP8B3O60423 1300 aa13.26□□□□□ -0.29
PDPN-208ENST00000509009 RPP40O75818 363 aaKnown RBP13.26□□□□□ -0.29
PDPN-208ENST00000509009 AP1G2O75843 785 aa13.26□□□□□ -0.29
PDPN-208ENST00000509009 BEST1O76090 585 aa13.26□□□□□ -0.29
PDPN-208ENST00000509009 ZNF202O95125 648 aa13.26□□□□□ -0.29
PDPN-208ENST00000509009 KIF20AO95235 890 aa13.26□□□□□ -0.29
PDPN-208ENST00000509009 ZDHHC11BP0C7U3 371 aa13.26□□□□□ -0.29
PDPN-208ENST00000509009 MBL2P11226 248 aaPredicted RBP13.26□□□□□ -0.29
PDPN-208ENST00000509009 PTPRDP23468 1912 aa13.26□□□□□ -0.29
PDPN-208ENST00000509009 VAMP7P51809 220 aa13.26□□□□□ -0.29
PDPN-208ENST00000509009 NDST1P52848 882 aa13.26□□□□□ -0.29
PDPN-208ENST00000509009 MCCD1P59942 119 aaPredicted RBP13.26□□□□□ -0.29
PDPN-208ENST00000509009 DHCR24Q15392 516 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms