RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 SRGAP2O75044 1071 aa5.68□□□□□ -1.5
UBE2D3-225ENST00000508476 U2AF1L5P0DN76 240 aaPredicted RBP5.68□□□□□ -1.5
UBE2D3-225ENST00000508476 ALDH5A1P51649 535 aaPredicted RBP5.68□□□□□ -1.5
UBE2D3-225ENST00000508476 U2AF1Q01081 240 aaKnown RBP eCLIP5.68□□□□□ -1.5
UBE2D3-225ENST00000508476 CERCAMQ5T4B2 595 aa5.68□□□□□ -1.5
UBE2D3-225ENST00000508476 CACHD1Q5VU97 1274 aa5.68□□□□□ -1.5
UBE2D3-225ENST00000508476 KIAA1614Q5VZ46 1190 aa5.68□□□□□ -1.5
UBE2D3-225ENST00000508476 SPARTQ8N0X7 666 aa5.68□□□□□ -1.5
UBE2D3-225ENST00000508476 SPSB4Q96A44 273 aa5.68□□□□□ -1.5
UBE2D3-225ENST00000508476 DAZAP1Q96EP5 407 aaKnown RBP5.68□□□□□ -1.5
UBE2D3-225ENST00000508476 ZBTB45Q96K62 511 aaPredicted RBP5.68□□□□□ -1.5
UBE2D3-225ENST00000508476 C5orf34Q96MH7 638 aa5.68□□□□□ -1.5
UBE2D3-225ENST00000508476 C1QTNF7Q9BXJ2 289 aa5.68□□□□□ -1.5
UBE2D3-225ENST00000508476 STK31Q9BXU1 1019 aa5.68□□□□□ -1.5
UBE2D3-225ENST00000508476 CIPCQ9C0C6 399 aa5.68□□□□□ -1.5
UBE2D3-225ENST00000508476 COL20A1Q9P218 1284 aa5.68□□□□□ -1.5
UBE2D3-225ENST00000508476 FER1L4A9Z1Z3 1794 aa5.67□□□□□ -1.5
UBE2D3-225ENST00000508476 MBD3L4A6NDZ8 208 aaPredicted RBP5.67□□□□□ -1.5
UBE2D3-225ENST00000508476 MBD3L3A6NE82 208 aaPredicted RBP5.67□□□□□ -1.5
UBE2D3-225ENST00000508476 VSTM5A8MXK1 200 aa5.67□□□□□ -1.5
UBE2D3-225ENST00000508476 ADAMTS3O15072 1205 aa5.67□□□□□ -1.5
UBE2D3-225ENST00000508476 TP73O15350 636 aa5.67□□□□□ -1.5
UBE2D3-225ENST00000508476 RASAL1O95294 804 aa5.67□□□□□ -1.5
UBE2D3-225ENST00000508476 DLDP09622 509 aaKnown RBP5.67□□□□□ -1.5
UBE2D3-225ENST00000508476 ZKSCAN1P17029 563 aaPredicted RBP5.67□□□□□ -1.5
UBE2D3-225ENST00000508476 SFPQP23246 707 aaKnown RBP eCLIP5.67□□□□□ -1.53e-6■□□□□ 10.5
UBE2D3-225ENST00000508476 KELP23276 732 aa5.67□□□□□ -1.5
UBE2D3-225ENST00000508476 RENBPP51606 427 aa5.67□□□□□ -1.5
UBE2D3-225ENST00000508476 BCAT1P54687 386 aa5.67□□□□□ -1.5
UBE2D3-225ENST00000508476 RPS16P62249 146 aaKnown RBP5.67□□□□□ -1.5
UBE2D3-225ENST00000508476 FMO1Q01740 532 aa5.67□□□□□ -1.5
UBE2D3-225ENST00000508476 KLF9Q13886 244 aaPredicted RBP5.67□□□□□ -1.5
UBE2D3-225ENST00000508476 CCNIQ14094 377 aa5.67□□□□□ -1.5
UBE2D3-225ENST00000508476 CNGA2Q16280 664 aa5.67□□□□□ -1.5
UBE2D3-225ENST00000508476 TBC1D25Q3MII6 688 aa5.67□□□□□ -1.5
UBE2D3-225ENST00000508476 SLC18B1Q6NT16 456 aa5.67□□□□□ -1.5
UBE2D3-225ENST00000508476 CCDC149Q6ZUS6 474 aa5.67□□□□□ -1.5
UBE2D3-225ENST00000508476 SMG7Q92540 1137 aaKnown RBP5.67□□□□□ -1.5
UBE2D3-225ENST00000508476 SUCLG2Q96I99 432 aa5.67□□□□□ -1.5
UBE2D3-225ENST00000508476 KRTAP9-8Q9BYQ0 159 aa5.67□□□□□ -1.5
UBE2D3-225ENST00000508476 FAM204AQ9H8W3 233 aa5.67□□□□□ -1.5
UBE2D3-225ENST00000508476 XPNPEP3Q9NQH7 507 aa5.67□□□□□ -1.5
UBE2D3-225ENST00000508476 PDGFCQ9NRA1 345 aa5.67□□□□□ -1.5
UBE2D3-225ENST00000508476 AFF4Q9UHB7 1163 aaKnown RBP5.67□□□□□ -1.5
UBE2D3-225ENST00000508476 PPP6CO00743 305 aa5.66□□□□□ -1.5
UBE2D3-225ENST00000508476 TPP1O14773 563 aa5.66□□□□□ -1.5
UBE2D3-225ENST00000508476 FRS3O43559 492 aa5.66□□□□□ -1.5
UBE2D3-225ENST00000508476 MARCH6O60337 910 aa5.66□□□□□ -1.5
UBE2D3-225ENST00000508476 RASSF9O75901 435 aa5.66□□□□□ -1.5
UBE2D3-225ENST00000508476 PRKCBP05771 671 aa5.66□□□□□ -1.5
UBE2D3-225ENST00000508476 HGFP14210 728 aa5.66□□□□□ -1.5
UBE2D3-225ENST00000508476 IL1R1P14778 569 aa5.66□□□□□ -1.5
UBE2D3-225ENST00000508476 UQCRC1P31930 480 aa5.66□□□□□ -1.5
UBE2D3-225ENST00000508476 GKP32189 559 aa5.66□□□□□ -1.5
UBE2D3-225ENST00000508476 GALEQ14376 348 aa5.66□□□□□ -1.5
UBE2D3-225ENST00000508476 RNF220Q5VTB9 566 aa5.66□□□□□ -1.5
UBE2D3-225ENST00000508476 ZNF425Q6IV72 752 aa5.66□□□□□ -1.5
UBE2D3-225ENST00000508476 SLC2A7Q6PXP3 512 aa5.66□□□□□ -1.5
UBE2D3-225ENST00000508476 CATSPERGQ6ZRH7 1159 aa5.66□□□□□ -1.5
UBE2D3-225ENST00000508476 NEK8Q86SG6 692 aa5.66□□□□□ -1.5
UBE2D3-225ENST00000508476 SESTD1Q86VW0 696 aa5.66□□□□□ -1.5
UBE2D3-225ENST00000508476 MYO1HQ8N1T3 1032 aa5.66□□□□□ -1.5
UBE2D3-225ENST00000508476 SCARB1Q8WTV0 552 aa5.66□□□□□ -1.5
UBE2D3-225ENST00000508476 LRTOMTQ8WZ04 291 aa5.66□□□□□ -1.5
UBE2D3-225ENST00000508476 NMD3Q96D46 503 aaKnown RBP5.66□□□□□ -1.5
UBE2D3-225ENST00000508476 ASB2Q96Q27 587 aa5.66□□□□□ -1.5
UBE2D3-225ENST00000508476 SNX18Q96RF0 628 aa5.66□□□□□ -1.5
UBE2D3-225ENST00000508476 PPP1R9BQ96SB3 815 aa5.66□□□□□ -1.5
UBE2D3-225ENST00000508476 MMS19Q96T76 1030 aa5.66□□□□□ -1.5
UBE2D3-225ENST00000508476 ASIC5Q9NY37 505 aa5.66□□□□□ -1.5
UBE2D3-225ENST00000508476 TCEAL9Q9UHQ7 104 aa5.66□□□□□ -1.5
UBE2D3-225ENST00000508476 DRG1Q9Y295 367 aaKnown RBP5.66□□□□□ -1.5
UBE2D3-225ENST00000508476 ZNF804BA4D1E1 1349 aa5.66□□□□□ -1.5
UBE2D3-225ENST00000508476 FNDC1Q4ZHG4 1894 aaPredicted RBP5.65□□□□□ -1.5
UBE2D3-225ENST00000508476 LOC102723971A0A1B0GUV8 181 aa5.65□□□□□ -1.5
UBE2D3-225ENST00000508476 TCRBV5S1A1TA0A578 114 aa5.65□□□□□ -1.5
UBE2D3-225ENST00000508476 ISM1B1AKI9 464 aa5.65□□□□□ -1.5
UBE2D3-225ENST00000508476 H7C1Q1 480 aa5.65□□□□□ -1.5
UBE2D3-225ENST00000508476 AGPSO00116 658 aa5.65□□□□□ -1.5
UBE2D3-225ENST00000508476 CES2O00748 559 aa5.65□□□□□ -1.5
UBE2D3-225ENST00000508476 RGS10O43665 173 aa5.65□□□□□ -1.5
UBE2D3-225ENST00000508476 RRP9O43818 475 aaKnown RBP5.65□□□□□ -1.5
UBE2D3-225ENST00000508476 PMPCBO75439 489 aa5.65□□□□□ -1.5
UBE2D3-225ENST00000508476 FGAP02671 866 aa5.65□□□□□ -1.5
UBE2D3-225ENST00000508476 KLRC1P26715 233 aa5.65□□□□□ -1.5
UBE2D3-225ENST00000508476 CERS1P27544 350 aa5.65□□□□□ -1.5
UBE2D3-225ENST00000508476 ARHGAP25P42331 645 aa5.65□□□□□ -1.5
UBE2D3-225ENST00000508476 PTDSS1P48651 473 aaKnown RBP5.65□□□□□ -1.5
UBE2D3-225ENST00000508476 KRTAP10-11P60412 298 aa5.65□□□□□ -1.5
UBE2D3-225ENST00000508476 NPY5RQ15761 445 aa5.65□□□□□ -1.5
UBE2D3-225ENST00000508476 ETFDHQ16134 617 aa5.65□□□□□ -1.5
UBE2D3-225ENST00000508476 KIAA0753Q2KHM9 967 aa5.65□□□□□ -1.5
UBE2D3-225ENST00000508476 BCDIN3DQ7Z5W3 292 aaKnown RBP5.65□□□□□ -1.5
UBE2D3-225ENST00000508476 C14orf80Q86SX3 495 aa5.65□□□□□ -1.5
UBE2D3-225ENST00000508476 SIRT6Q8N6T7 355 aa5.65□□□□□ -1.5
UBE2D3-225ENST00000508476 C8orf58Q8NAV2 365 aa5.65□□□□□ -1.5
UBE2D3-225ENST00000508476 RSPRY1Q96DX4 576 aa5.65□□□□□ -1.5
UBE2D3-225ENST00000508476 TRIM5Q9C035 493 aa5.65□□□□□ -1.5
UBE2D3-225ENST00000508476 HDAC9Q9UKV0 1011 aa5.65□□□□□ -1.5
UBE2D3-225ENST00000508476 AMFRQ9UKV5 643 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms