RNA–Protein interactions for RNA: ENST00000508284.5

SQSTM1-212, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-212ENST00000508284 RBM12Q9NTZ6 932 aaKnown RBP19.15■□□□□ 0.66
SQSTM1-212ENST00000508284 EHD2Q9NZN4 543 aa19.15■□□□□ 0.66
SQSTM1-212ENST00000508284 LIMA1Q9UHB6 759 aaKnown RBP19.15■□□□□ 0.66
SQSTM1-212ENST00000508284 FRMD4BQ9Y2L6 1034 aa19.15■□□□□ 0.66
SQSTM1-212ENST00000508284 PATJQ8NI35 1801 aa19.15■□□□□ 0.66
SQSTM1-212ENST00000508284 TADA3O75528 432 aa19.14■□□□□ 0.65
SQSTM1-212ENST00000508284 TPM3P06753 285 aa19.14■□□□□ 0.65
SQSTM1-212ENST00000508284 USP17L7P0C7H9 530 aa19.14■□□□□ 0.65
SQSTM1-212ENST00000508284 PTPN1P18031 435 aaKnown RBP19.14■□□□□ 0.65
SQSTM1-212ENST00000508284 CXCL12P48061 93 aa19.14■□□□□ 0.65
SQSTM1-212ENST00000508284 MARSP56192 900 aaKnown RBP19.14■□□□□ 0.65
SQSTM1-212ENST00000508284 RUNX3Q13761 415 aa19.14■□□□□ 0.65
SQSTM1-212ENST00000508284 NCOA4Q13772 614 aa19.14■□□□□ 0.65
SQSTM1-212ENST00000508284 ZNF268Q14587 947 aaPredicted RBP19.14■□□□□ 0.65
SQSTM1-212ENST00000508284 ZNF667Q5HYK9 610 aa19.14■□□□□ 0.65
SQSTM1-212ENST00000508284 TDRD10Q5VZ19 366 aaKnown RBP19.14■□□□□ 0.65
SQSTM1-212ENST00000508284 CEP135Q66GS9 1140 aa19.14■□□□□ 0.65
SQSTM1-212ENST00000508284 TRIM68Q6AZZ1 485 aa19.14■□□□□ 0.65
SQSTM1-212ENST00000508284 MAMSTRQ6ZN01 415 aa19.14■□□□□ 0.65
SQSTM1-212ENST00000508284 FILIP1Q7Z7B0 1213 aa19.14■□□□□ 0.65
SQSTM1-212ENST00000508284 ZBTB44Q8NCP5 570 aa19.14■□□□□ 0.65
SQSTM1-212ENST00000508284 PLEKHO2Q8TD55 490 aa19.14■□□□□ 0.65
SQSTM1-212ENST00000508284 RUBCNQ92622 972 aa19.14■□□□□ 0.65
SQSTM1-212ENST00000508284 CYP2S1Q96SQ9 504 aa19.14■□□□□ 0.65
SQSTM1-212ENST00000508284 FAM83CQ9BQN1 747 aa19.14■□□□□ 0.65
SQSTM1-212ENST00000508284 TRIM5Q9C035 493 aa19.14■□□□□ 0.65
SQSTM1-212ENST00000508284 EBF3Q9H4W6 596 aa19.14■□□□□ 0.65
SQSTM1-212ENST00000508284 DMAC2Q9NW81 257 aa19.14■□□□□ 0.65
SQSTM1-212ENST00000508284 EP300Q09472 2414 aaPredicted RBP19.14■□□□□ 0.65
SQSTM1-212ENST00000508284 WDR87Q6ZQQ6 2873 aa19.14■□□□□ 0.65
SQSTM1-212ENST00000508284 AP5Z1O43299 807 aa19.13■□□□□ 0.65
SQSTM1-212ENST00000508284 SERPINC1P01008 464 aa19.13■□□□□ 0.65
SQSTM1-212ENST00000508284 ZNF75DP51815 510 aa19.13■□□□□ 0.65
SQSTM1-212ENST00000508284 AMPD2Q01433 879 aa19.13■□□□□ 0.65
SQSTM1-212ENST00000508284 ADAM9Q13443 819 aa19.13■□□□□ 0.65
SQSTM1-212ENST00000508284 HSP90AA4PQ58FG1 418 aa19.13■□□□□ 0.65
SQSTM1-212ENST00000508284 APTXQ7Z2E3 356 aaKnown RBP19.13■□□□□ 0.65
SQSTM1-212ENST00000508284 SPEM1Q8N4L4 309 aa19.13■□□□□ 0.65
SQSTM1-212ENST00000508284 ARL14EPQ8N8R7 260 aaPredicted RBP19.13■□□□□ 0.65
SQSTM1-212ENST00000508284 MRFAP1L1Q96HT8 127 aa19.13■□□□□ 0.65
SQSTM1-212ENST00000508284 XYLT2Q9H1B5 865 aa19.13■□□□□ 0.65
SQSTM1-212ENST00000508284 DPEP3Q9H4B8 488 aa19.13■□□□□ 0.65
SQSTM1-212ENST00000508284 TRPM5Q9NZQ8 1165 aa19.13■□□□□ 0.65
SQSTM1-212ENST00000508284 GVINP1Q7Z2Y8 2422 aa19.12■□□□□ 0.65
SQSTM1-212ENST00000508284 F8VP50 259 aa19.12■□□□□ 0.65
SQSTM1-212ENST00000508284 ADCY5O95622 1261 aa19.12■□□□□ 0.65
SQSTM1-212ENST00000508284 C4BPAP04003 597 aaKnown RBP19.12■□□□□ 0.65
SQSTM1-212ENST00000508284 EPB41P11171 864 aaKnown RBP19.12■□□□□ 0.65
SQSTM1-212ENST00000508284 P4HA1P13674 534 aa19.12■□□□□ 0.65
SQSTM1-212ENST00000508284 HDCP19113 662 aa19.12■□□□□ 0.65
SQSTM1-212ENST00000508284 PDE6CP51160 858 aa19.12■□□□□ 0.65
SQSTM1-212ENST00000508284 CLDN10P78369 228 aa19.12■□□□□ 0.65
SQSTM1-212ENST00000508284 SATB1Q01826 763 aa19.12■□□□□ 0.65
SQSTM1-212ENST00000508284 GAS6Q14393 721 aa19.12■□□□□ 0.65
SQSTM1-212ENST00000508284 MTF1Q14872 753 aa19.12■□□□□ 0.65
SQSTM1-212ENST00000508284 PDGFRLQ15198 375 aa19.12■□□□□ 0.65
SQSTM1-212ENST00000508284 KRT31Q15323 416 aa19.12■□□□□ 0.65
SQSTM1-212ENST00000508284 SCARA5Q6ZMJ2 495 aa19.12■□□□□ 0.65
SQSTM1-212ENST00000508284 B3GALNT2Q8NCR0 500 aa19.12■□□□□ 0.65
SQSTM1-212ENST00000508284 NELL1Q92832 810 aa19.12■□□□□ 0.65
SQSTM1-212ENST00000508284 C8orf48Q96LL4 319 aa19.12■□□□□ 0.65
SQSTM1-212ENST00000508284 SLC22A12Q96S37 553 aa19.12■□□□□ 0.65
SQSTM1-212ENST00000508284 ELOVL4Q9GZR5 314 aa19.12■□□□□ 0.65
SQSTM1-212ENST00000508284 SMYD3Q9H7B4 428 aa19.12■□□□□ 0.65
SQSTM1-212ENST00000508284 HPS4Q9NQG7 708 aa19.12■□□□□ 0.65
SQSTM1-212ENST00000508284 NCDNQ9UBB6 729 aa19.12■□□□□ 0.65
SQSTM1-212ENST00000508284 NME7Q9Y5B8 376 aa19.12■□□□□ 0.65
SQSTM1-212ENST00000508284 ZNF638Q14966 1978 aaKnown RBP19.12■□□□□ 0.65
SQSTM1-212ENST00000508284 A0A1B0GTH6 734 aa19.11■□□□□ 0.65
SQSTM1-212ENST00000508284 C2orf78A6NCI8 922 aa19.11■□□□□ 0.65
SQSTM1-212ENST00000508284 LRRC10BA6NIK2 292 aa19.11■□□□□ 0.65
SQSTM1-212ENST00000508284 ABL1P00519 1130 aa19.11■□□□□ 0.65
SQSTM1-212ENST00000508284 TPM2P07951 284 aa19.11■□□□□ 0.65
SQSTM1-212ENST00000508284 CDC25BP30305 580 aa19.11■□□□□ 0.65
SQSTM1-212ENST00000508284 IFNAR2P48551 515 aa19.11■□□□□ 0.65
SQSTM1-212ENST00000508284 CDH8P55286 799 aa19.11■□□□□ 0.65
SQSTM1-212ENST00000508284 UBASH3AP57075 661 aa19.11■□□□□ 0.65
SQSTM1-212ENST00000508284 USP46P62068 366 aa19.11■□□□□ 0.65
SQSTM1-212ENST00000508284 DLG4P78352 724 aa19.11■□□□□ 0.65
SQSTM1-212ENST00000508284 CCDC173Q0VFZ6 552 aa19.11■□□□□ 0.65
SQSTM1-212ENST00000508284 IFRD2Q12894 506 aaPredicted RBP19.11■□□□□ 0.65
SQSTM1-212ENST00000508284 CCDC40Q4G0X9 1142 aa19.11■□□□□ 0.65
SQSTM1-212ENST00000508284 FILIP1LQ4L180 1135 aa19.11■□□□□ 0.65
SQSTM1-212ENST00000508284 Q6ZS52 159 aa19.11■□□□□ 0.65
SQSTM1-212ENST00000508284 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.11■□□□□ 0.65
SQSTM1-212ENST00000508284 KIAA2013Q8IYS2 634 aa19.11■□□□□ 0.65
SQSTM1-212ENST00000508284 SYNPOQ8N3V7 929 aa19.11■□□□□ 0.65
SQSTM1-212ENST00000508284 SUMF1Q8NBK3 374 aa19.11■□□□□ 0.65
SQSTM1-212ENST00000508284 TNIP3Q96KP6 325 aa19.11■□□□□ 0.65
SQSTM1-212ENST00000508284 MED10Q9BTT4 135 aa19.11■□□□□ 0.65
SQSTM1-212ENST00000508284 ZNF518BQ9C0D4 1074 aa19.11■□□□□ 0.65
SQSTM1-212ENST00000508284 VRTNQ9H8Y1 702 aa19.11■□□□□ 0.65
SQSTM1-212ENST00000508284 METTL14Q9HCE5 456 aaKnown RBP19.11■□□□□ 0.65
SQSTM1-212ENST00000508284 DUS2Q9NX74 493 aaKnown RBP19.11■□□□□ 0.65
SQSTM1-212ENST00000508284 IFNKQ9P0W0 207 aa19.11■□□□□ 0.65
SQSTM1-212ENST00000508284 FANCMQ8IYD8 2048 aa19.11■□□□□ 0.65
SQSTM1-212ENST00000508284 DENND4CQ5VZ89 1909 aa19.1■□□□□ 0.65
SQSTM1-212ENST00000508284 ATP8B3O60423 1300 aa19.1■□□□□ 0.65
SQSTM1-212ENST00000508284 MAPK13O15264 365 aa19.1■□□□□ 0.65
SQSTM1-212ENST00000508284 LILRB5O75023 590 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms