RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 SMPD4Q9NXE4 827 aa9.95□□□□□ -0.82
DDX41-209ENST00000508279 OBP2AQ9NY56 170 aa9.95□□□□□ -0.82
DDX41-209ENST00000508279 CHORDC1Q9UHD1 332 aaPredicted RBP9.95□□□□□ -0.82
DDX41-209ENST00000508279 ZMYM5Q9UJ78 669 aa9.95□□□□□ -0.82
DDX41-209ENST00000508279 PATJQ8NI35 1801 aa9.95□□□□□ -0.82
DDX41-209ENST00000508279 ZNF840PA6NDX5 716 aa9.94□□□□□ -0.82
DDX41-209ENST00000508279 SCAMP3O14828 347 aaKnown RBP9.94□□□□□ -0.82
DDX41-209ENST00000508279 RTN3O95197 1032 aaPredicted RBP9.94□□□□□ -0.82
DDX41-209ENST00000508279 MBL2P11226 248 aaPredicted RBP9.94□□□□□ -0.82
DDX41-209ENST00000508279 ARSAP15289 507 aa9.94□□□□□ -0.82
DDX41-209ENST00000508279 IFNAR2P48551 515 aa9.94□□□□□ -0.82
DDX41-209ENST00000508279 FMO5P49326 533 aa9.94□□□□□ -0.82
DDX41-209ENST00000508279 NUBP1P53384 320 aa9.94□□□□□ -0.82
DDX41-209ENST00000508279 PLCB2Q00722 1185 aa9.94□□□□□ -0.82
DDX41-209ENST00000508279 INCA1Q0VD86 236 aa9.94□□□□□ -0.82
DDX41-209ENST00000508279 MTF1Q14872 753 aa9.94□□□□□ -0.82
DDX41-209ENST00000508279 PON2Q15165 354 aa9.94□□□□□ -0.82
DDX41-209ENST00000508279 TPD52L1Q16890 204 aaPredicted RBP9.94□□□□□ -0.82
DDX41-209ENST00000508279 PPP1R26Q5T8A7 1209 aaPredicted RBP9.94□□□□□ -0.82
DDX41-209ENST00000508279 CRYBG2Q8N1P7 616 aa9.94□□□□□ -0.82
DDX41-209ENST00000508279 TRIML1Q8N9V2 468 aa9.94□□□□□ -0.82
DDX41-209ENST00000508279 ZMIZ2Q8NF64 920 aa9.94□□□□□ -0.82
DDX41-209ENST00000508279 RIN3Q8TB24 985 aa9.94□□□□□ -0.82
DDX41-209ENST00000508279 SH3RF2Q8TEC5 729 aa9.94□□□□□ -0.82
DDX41-209ENST00000508279 WHAMMQ8TF30 809 aa9.94□□□□□ -0.82
DDX41-209ENST00000508279 CEP295NLQ96MC4 621 aa9.94□□□□□ -0.82
DDX41-209ENST00000508279 GBP4Q96PP9 640 aa9.94□□□□□ -0.82
DDX41-209ENST00000508279 DDX23Q9BUQ8 820 aaKnown RBP9.94□□□□□ -0.82
DDX41-209ENST00000508279 TTLL2Q9BWV7 592 aa9.94□□□□□ -0.82
DDX41-209ENST00000508279 NACA2Q9H009 215 aa9.94□□□□□ -0.82
DDX41-209ENST00000508279 IRF2BPLQ9H1B7 796 aa9.94□□□□□ -0.82
DDX41-209ENST00000508279 NUP62CLQ9H1M0 184 aa9.94□□□□□ -0.82
DDX41-209ENST00000508279 CLSTN2Q9H4D0 955 aa9.94□□□□□ -0.82
DDX41-209ENST00000508279 KIF9Q9HAQ2 790 aa9.94□□□□□ -0.82
DDX41-209ENST00000508279 LMAN1LQ9HAT1 526 aa9.94□□□□□ -0.82
DDX41-209ENST00000508279 DUS2Q9NX74 493 aaKnown RBP9.94□□□□□ -0.82
DDX41-209ENST00000508279 GMIPQ9P107 970 aa9.94□□□□□ -0.82
DDX41-209ENST00000508279 WNT6Q9Y6F9 365 aa9.94□□□□□ -0.82
DDX41-209ENST00000508279 SPECC1L-ADORA2AF8WAN1 911 aa9.93□□□□□ -0.82
DDX41-209ENST00000508279 ARNTLO00327 626 aa9.93□□□□□ -0.82
DDX41-209ENST00000508279 LAMTOR5O43504 91 aa9.93□□□□□ -0.82
DDX41-209ENST00000508279 FGFR1OPO95684 399 aaKnown RBP9.93□□□□□ -0.82
DDX41-209ENST00000508279 GNA14O95837 355 aa9.93□□□□□ -0.82
DDX41-209ENST00000508279 CCDC192P0DO97 292 aa9.93□□□□□ -0.82
DDX41-209ENST00000508279 CD19P15391 556 aa9.93□□□□□ -0.82
DDX41-209ENST00000508279 ACO1P21399 889 aaKnown RBP9.93□□□□□ -0.82
DDX41-209ENST00000508279 WEE1P30291 646 aa9.93□□□□□ -0.82
DDX41-209ENST00000508279 CTHP32929 405 aa9.93□□□□□ -0.82
DDX41-209ENST00000508279 PDE6CP51160 858 aa9.93□□□□□ -0.82
DDX41-209ENST00000508279 CETN1Q12798 172 aa9.93□□□□□ -0.82
DDX41-209ENST00000508279 KCNH2Q12809 1159 aa9.93□□□□□ -0.82
DDX41-209ENST00000508279 CUL2Q13617 745 aa9.93□□□□□ -0.82
DDX41-209ENST00000508279 RUNX3Q13761 415 aa9.93□□□□□ -0.82
DDX41-209ENST00000508279 ITPRIPL2Q3MIP1 535 aa9.93□□□□□ -0.82
DDX41-209ENST00000508279 TXNDC11Q6PKC3 985 aa9.93□□□□□ -0.82
DDX41-209ENST00000508279 CLEC20AQ6ZU45 233 aa9.93□□□□□ -0.82
DDX41-209ENST00000508279 GPRIN1Q7Z2K8 1008 aa9.93□□□□□ -0.82
DDX41-209ENST00000508279 C1orf210Q8IVY1 113 aa9.93□□□□□ -0.82
DDX41-209ENST00000508279 PPM1KQ8N3J5 372 aa9.93□□□□□ -0.82
DDX41-209ENST00000508279 TMEM176AQ96HP8 235 aa9.93□□□□□ -0.82
DDX41-209ENST00000508279 NT5C1BQ96P26 610 aa9.93□□□□□ -0.82
DDX41-209ENST00000508279 NELL2Q99435 816 aa9.93□□□□□ -0.82
DDX41-209ENST00000508279 HNRNPABQ99729 332 aaKnown RBP9.93□□□□□ -0.82
DDX41-209ENST00000508279 RNF38Q9H0F5 515 aa9.93□□□□□ -0.82
DDX41-209ENST00000508279 C8orf33Q9H7E9 229 aaPredicted RBP9.93□□□□□ -0.82
DDX41-209ENST00000508279 TRPV5Q9NQA5 729 aa9.93□□□□□ -0.82
DDX41-209ENST00000508279 RBM12Q9NTZ6 932 aaKnown RBP9.93□□□□□ -0.82
DDX41-209ENST00000508279 GCNT4Q9P109 453 aa9.93□□□□□ -0.82
DDX41-209ENST00000508279 DLGAP2Q9P1A6 1054 aa9.93□□□□□ -0.82
DDX41-209ENST00000508279 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.93□□□□□ -0.82
DDX41-209ENST00000508279 CPQQ9Y646 472 aa9.93□□□□□ -0.82
DDX41-209ENST00000508279 SHISA7A6NL88 538 aa9.92□□□□□ -0.82
DDX41-209ENST00000508279 SOBPA7XYQ1 873 aa9.92□□□□□ -0.82
DDX41-209ENST00000508279 GOLGA6L22H0YM25 854 aa9.92□□□□□ -0.82
DDX41-209ENST00000508279 LEFTY2O00292 366 aa9.92□□□□□ -0.82
DDX41-209ENST00000508279 TNFRSF10BO14763 440 aa9.92□□□□□ -0.82
DDX41-209ENST00000508279 CYP26A1O43174 497 aa9.92□□□□□ -0.82
DDX41-209ENST00000508279 AFPP02771 609 aaKnown RBP9.92□□□□□ -0.82
DDX41-209ENST00000508279 IRF1P10914 325 aa9.92□□□□□ -0.82
DDX41-209ENST00000508279 PPP3CCP48454 512 aa9.92□□□□□ -0.82
DDX41-209ENST00000508279 MRE11P49959 708 aa9.92□□□□□ -0.82
DDX41-209ENST00000508279 RAD23BP54727 409 aa9.92□□□□□ -0.82
DDX41-209ENST00000508279 YWHAEP62258 255 aaKnown RBP9.92□□□□□ -0.82
DDX41-209ENST00000508279 USP4Q13107 963 aa9.92□□□□□ -0.82
DDX41-209ENST00000508279 ZNF268Q14587 947 aaPredicted RBP9.92□□□□□ -0.82
DDX41-209ENST00000508279 ZNF77Q15935 545 aa9.92□□□□□ -0.82
DDX41-209ENST00000508279 HSP90AA4PQ58FG1 418 aa9.92□□□□□ -0.82
DDX41-209ENST00000508279 HECTD3Q5T447 861 aa9.92□□□□□ -0.82
DDX41-209ENST00000508279 TMEM270Q6UE05 265 aa9.92□□□□□ -0.82
DDX41-209ENST00000508279 RRAGAQ7L523 313 aa9.92□□□□□ -0.82
DDX41-209ENST00000508279 TTC39CQ8N584 583 aa9.92□□□□□ -0.82
DDX41-209ENST00000508279 SLC4A11Q8NBS3 891 aa9.92□□□□□ -0.82
DDX41-209ENST00000508279 PDZD8Q8NEN9 1154 aa9.92□□□□□ -0.82
DDX41-209ENST00000508279 CNOT6LQ96LI5 555 aaKnown RBP9.92□□□□□ -0.82
DDX41-209ENST00000508279 IPO9Q96P70 1041 aaKnown RBP9.92□□□□□ -0.82
DDX41-209ENST00000508279 FAM83CQ9BQN1 747 aa9.92□□□□□ -0.82
DDX41-209ENST00000508279 OSBPL6Q9BZF3 934 aa9.92□□□□□ -0.82
DDX41-209ENST00000508279 LINC00597Q9H2U6 94 aa9.92□□□□□ -0.82
DDX41-209ENST00000508279 FBXO44Q9H4M3 255 aa9.92□□□□□ -0.82
DDX41-209ENST00000508279 CCSER2Q9H7U1 834 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms