RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 NUMBLQ9Y6R0 609 aa15.85■□□□□ 0.13
RNF4-210ENST00000508235 XPO1O14980 1071 aaKnown RBP15.84■□□□□ 0.13
RNF4-210ENST00000508235 SERPINC1P01008 464 aa15.84■□□□□ 0.13
RNF4-210ENST00000508235 ASGR2P07307 311 aa15.84■□□□□ 0.13
RNF4-210ENST00000508235 SETSIPP0DME0 302 aa15.84■□□□□ 0.13
RNF4-210ENST00000508235 AVPR1AP37288 418 aa15.84■□□□□ 0.13
RNF4-210ENST00000508235 BPIFB4P59827 614 aa15.84■□□□□ 0.13
RNF4-210ENST00000508235 USP46P62068 366 aa15.84■□□□□ 0.13
RNF4-210ENST00000508235 APBA1Q02410 837 aa15.84■□□□□ 0.13
RNF4-210ENST00000508235 PTK2Q05397 1052 aa15.84■□□□□ 0.13
RNF4-210ENST00000508235 MEA1Q16626 185 aa15.84■□□□□ 0.13
RNF4-210ENST00000508235 FAM78AQ5JUQ0 283 aa15.84■□□□□ 0.13
RNF4-210ENST00000508235 PARM1Q6UWI2 310 aa15.84■□□□□ 0.13
RNF4-210ENST00000508235 APTXQ7Z2E3 356 aaKnown RBP15.84■□□□□ 0.13
RNF4-210ENST00000508235 MON1AQ86VX9 555 aa15.84■□□□□ 0.13
RNF4-210ENST00000508235 SLC44A3Q8N4M1 653 aa15.84■□□□□ 0.13
RNF4-210ENST00000508235 TFAP2BQ92481 460 aa15.84■□□□□ 0.13
RNF4-210ENST00000508235 FGF14Q92915 247 aa15.84■□□□□ 0.13
RNF4-210ENST00000508235 ZSWIM3Q96MP5 696 aa15.84■□□□□ 0.13
RNF4-210ENST00000508235 STK33Q9BYT3 514 aa15.84■□□□□ 0.13
RNF4-210ENST00000508235 OBP2AQ9NY56 170 aa15.84■□□□□ 0.13
RNF4-210ENST00000508235 IL37Q9NZH6 218 aa15.84■□□□□ 0.13
RNF4-210ENST00000508235 FHOD1Q9Y613 1164 aa15.84■□□□□ 0.13
RNF4-210ENST00000508235 TRAV19A0A0A6YYK7 116 aa15.83■□□□□ 0.12
RNF4-210ENST00000508235 FAM92AA1XBS5 289 aa15.83■□□□□ 0.12
RNF4-210ENST00000508235 HHLA1C9JL84 531 aa15.83■□□□□ 0.12
RNF4-210ENST00000508235 PI4K2BG5E9Z4 385 aa15.83■□□□□ 0.12
RNF4-210ENST00000508235 DPYSL4O14531 572 aa15.83■□□□□ 0.12
RNF4-210ENST00000508235 TADA3O75528 432 aa15.83■□□□□ 0.12
RNF4-210ENST00000508235 BRD2P25440 801 aaKnown RBP15.83■□□□□ 0.12
RNF4-210ENST00000508235 GNA15P30679 374 aa15.83■□□□□ 0.12
RNF4-210ENST00000508235 DRAP1Q14919 205 aaPredicted RBP15.83■□□□□ 0.12
RNF4-210ENST00000508235 SYCP1Q15431 976 aa15.83■□□□□ 0.12
RNF4-210ENST00000508235 STXBP5Q5T5C0 1151 aa15.83■□□□□ 0.12
RNF4-210ENST00000508235 DPY19L2P1Q6NXN4 242 aa15.83■□□□□ 0.12
RNF4-210ENST00000508235 TTC30AQ86WT1 665 aa15.83■□□□□ 0.12
RNF4-210ENST00000508235 ARID3BQ8IVW6 561 aaPredicted RBP15.83■□□□□ 0.12
RNF4-210ENST00000508235 CMTM8Q8IZV2 173 aa15.83■□□□□ 0.12
RNF4-210ENST00000508235 MAB21L3Q8N8X9 362 aa15.83■□□□□ 0.12
RNF4-210ENST00000508235 NEK11Q8NG66 645 aa15.83■□□□□ 0.12
RNF4-210ENST00000508235 SCAMP5Q8TAC9 235 aa15.83■□□□□ 0.12
RNF4-210ENST00000508235 NAA15Q9BXJ9 866 aaKnown RBP15.83■□□□□ 0.12
RNF4-210ENST00000508235 SLC46A2Q9BY10 475 aa15.83■□□□□ 0.12
RNF4-210ENST00000508235 TLR8Q9NR97 1041 aaKnown RBP15.83■□□□□ 0.12
RNF4-210ENST00000508235 FAM207AQ9NSI2 230 aaPredicted RBP15.83■□□□□ 0.12
RNF4-210ENST00000508235 DUSP12Q9UNI6 340 aa15.83■□□□□ 0.12
RNF4-210ENST00000508235 SCML2Q9UQR0 700 aa15.83■□□□□ 0.12
RNF4-210ENST00000508235 SIK3Q9Y2K2 1263 aa15.83■□□□□ 0.12
RNF4-210ENST00000508235 ZNF840PA6NDX5 716 aa15.82■□□□□ 0.12
RNF4-210ENST00000508235 M0QYV0 167 aa15.82■□□□□ 0.12
RNF4-210ENST00000508235 FOXN3O00409 490 aaPredicted RBP15.82■□□□□ 0.12
RNF4-210ENST00000508235 NRG2O14511 850 aaPredicted RBP15.82■□□□□ 0.12
RNF4-210ENST00000508235 THAP12O43422 761 aa15.82■□□□□ 0.12
RNF4-210ENST00000508235 USP17L7P0C7H9 530 aa15.82■□□□□ 0.12
RNF4-210ENST00000508235 SRFP11831 508 aa15.82■□□□□ 0.12
RNF4-210ENST00000508235 PLA2G4AP47712 749 aa15.82■□□□□ 0.12
RNF4-210ENST00000508235 TUBP50607 506 aa15.82■□□□□ 0.12
RNF4-210ENST00000508235 ZXDAP98168 799 aa15.82■□□□□ 0.12
RNF4-210ENST00000508235 PDE4CQ08493 712 aa15.82■□□□□ 0.12
RNF4-210ENST00000508235 PKDCCQ504Y2 493 aa15.82■□□□□ 0.12
RNF4-210ENST00000508235 SNX30Q5VWJ9 437 aa15.82■□□□□ 0.12
RNF4-210ENST00000508235 TXNDC8Q6A555 127 aa15.82■□□□□ 0.12
RNF4-210ENST00000508235 PIGZQ86VD9 579 aa15.82■□□□□ 0.12
RNF4-210ENST00000508235 FAM71AQ8IYT1 594 aa15.82■□□□□ 0.12
RNF4-210ENST00000508235 CELF5Q8N6W0 485 aaKnown RBP15.82■□□□□ 0.12
RNF4-210ENST00000508235 DEPDC1BQ8WUY9 529 aa15.82■□□□□ 0.12
RNF4-210ENST00000508235 ZNF606Q8WXB4 792 aa15.82■□□□□ 0.12
RNF4-210ENST00000508235 RSAD2Q8WXG1 361 aa15.82■□□□□ 0.12
RNF4-210ENST00000508235 EDAQ92838 391 aa15.82■□□□□ 0.12
RNF4-210ENST00000508235 KXD1Q9BQD3 176 aa15.82■□□□□ 0.12
RNF4-210ENST00000508235 GANQ9H2C0 597 aa15.82■□□□□ 0.12
RNF4-210ENST00000508235 KIF9Q9HAQ2 790 aa15.82■□□□□ 0.12
RNF4-210ENST00000508235 LRRC4Q9HBW1 653 aa15.82■□□□□ 0.12
RNF4-210ENST00000508235 TRPC7Q9HCX4 862 aa15.82■□□□□ 0.12
RNF4-210ENST00000508235 RTN4Q9NQC3 1192 aaKnown RBP15.82■□□□□ 0.12
RNF4-210ENST00000508235 A0A1B0GTH6 734 aa15.81■□□□□ 0.12
RNF4-210ENST00000508235 F8VZ95 297 aa15.81■□□□□ 0.12
RNF4-210ENST00000508235 CYP26A1O43174 497 aa15.81■□□□□ 0.12
RNF4-210ENST00000508235 ABL1P00519 1130 aa15.81■□□□□ 0.12
RNF4-210ENST00000508235 PSMC3P17980 439 aa15.81■□□□□ 0.12
RNF4-210ENST00000508235 HDCP19113 662 aa15.81■□□□□ 0.12
RNF4-210ENST00000508235 FCARP24071 287 aa15.81■□□□□ 0.12
RNF4-210ENST00000508235 HELZP42694 1942 aaKnown RBP15.81■□□□□ 0.12
RNF4-210ENST00000508235 PSEN1P49768 467 aa15.81■□□□□ 0.12
RNF4-210ENST00000508235 KIF11P52732 1056 aa15.81■□□□□ 0.12
RNF4-210ENST00000508235 ZNF445P59923 1031 aa15.81■□□□□ 0.12
RNF4-210ENST00000508235 POLR2FP61218 127 aaKnown RBP15.81■□□□□ 0.12
RNF4-210ENST00000508235 ZNF268Q14587 947 aaPredicted RBP15.81■□□□□ 0.12
RNF4-210ENST00000508235 RAB41Q5JT25 222 aa15.81■□□□□ 0.12
RNF4-210ENST00000508235 TANGO2Q6ICL3 276 aa15.81■□□□□ 0.12
RNF4-210ENST00000508235 GPRIN1Q7Z2K8 1008 aa15.81■□□□□ 0.12
RNF4-210ENST00000508235 CCDC186Q7Z3E2 898 aa15.81■□□□□ 0.12
RNF4-210ENST00000508235 YAF2Q8IY57 180 aa15.81■□□□□ 0.12
RNF4-210ENST00000508235 ARHGAP18Q8N392 663 aa15.81■□□□□ 0.12
RNF4-210ENST00000508235 UBA3Q8TBC4 463 aa15.81■□□□□ 0.12
RNF4-210ENST00000508235 KCTD13Q8WZ19 329 aa15.81■□□□□ 0.12
RNF4-210ENST00000508235 SECISBP2LQ93073 1101 aaKnown RBP15.81■□□□□ 0.12
RNF4-210ENST00000508235 SPAG5Q96R06 1193 aa15.81■□□□□ 0.12
RNF4-210ENST00000508235 ZSWIM1Q9BR11 485 aa15.81■□□□□ 0.12
RNF4-210ENST00000508235 TDP1Q9NUW8 608 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms