RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 RFWD2Q8NHY2 731 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 SCFD2Q8WU76 684 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 SLC44A1Q8WWI5 657 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 RMND5BQ96G75 393 aaPredicted RBP11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 NACC1Q96RE7 527 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 SLC29A1Q99808 456 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 BTBD2Q9BX70 525 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 ZNF717Q9BY31 904 aaPredicted RBP11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 HIPK3Q9H422 1215 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 NTN4Q9HB63 628 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 OLFML3Q9NRN5 406 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 LRRC4BQ9NT99 713 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 RIC8BQ9NVN3 520 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 SPG7Q9UQ90 795 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 MAFBQ9Y5Q3 323 aaPredicted RBP11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 CPQQ9Y646 472 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 WASF2Q9Y6W5 498 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 MYH10P35580 1976 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 WDR91A4D1P6 747 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 RCCD1A6NED2 376 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 CFAP99D6REC4 459 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 MYO1DO94832 1006 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 EPN2O95208 641 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 ITIH1P19827 911 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 IREB2P48200 963 aaKnown RBP11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 PRAMEP78395 509 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 GALNT3Q14435 633 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 PTPROQ16827 1216 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 EARS2Q5JPH6 523 aaKnown RBP11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 ERAP2Q6P179 960 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 ADGRD1Q6QNK2 874 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 KYAT3Q6YP21 454 aaKnown RBP11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 ARHGAP36Q6ZRI8 547 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 EPM2AIP1Q7L775 607 aaPredicted RBP11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 DHDDSQ86SQ9 333 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 GPR180Q86V85 440 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 LRRC6Q86X45 466 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 ANKLE2Q86XL3 938 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 HPS6Q86YV9 775 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 MB21D2Q8IYB1 491 aaPredicted RBP11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 KIAA2013Q8IYS2 634 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 PDPRQ8NCN5 879 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 MTBPQ96DY7 904 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 PTCD3Q96EY7 689 aaKnown RBP11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 GMLQ99445 158 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 C9orf16Q9BUW7 83 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 INTS2Q9H0H0 1204 aaKnown RBP11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 EPB41L4BQ9H329 900 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 SLA2Q9H6Q3 261 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 ATP13A3Q9H7F0 1226 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 ACAD9Q9H845 621 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 GDAP2Q9NXN4 497 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 GTF2IRD1Q9UHL9 959 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 VWA7Q9Y334 891 aa11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 RBM8AQ9Y5S9 174 aaKnown RBP11.23□□□□□ -0.61
PDLIM5-210ENST00000508216 PTPDC1A2A3K4 754 aa11.22□□□□□ -0.61
PDLIM5-210ENST00000508216 NUTM2BA6NNL0 878 aaPredicted RBP11.22□□□□□ -0.61
PDLIM5-210ENST00000508216 NUTM2EB1AL46 878 aaPredicted RBP11.22□□□□□ -0.61
PDLIM5-210ENST00000508216 ATP6V1G2-DDX39BF2Z307 99 aa11.22□□□□□ -0.61
PDLIM5-210ENST00000508216 H3BSA7 217 aa11.22□□□□□ -0.61
PDLIM5-210ENST00000508216 CCRL2O00421 344 aa11.22□□□□□ -0.61
PDLIM5-210ENST00000508216 DNAJC6O75061 913 aa11.22□□□□□ -0.61
PDLIM5-210ENST00000508216 ITGA2P17301 1181 aa11.22□□□□□ -0.61
PDLIM5-210ENST00000508216 GAP43P17677 238 aa11.22□□□□□ -0.61
PDLIM5-210ENST00000508216 HOXA6P31267 233 aa11.22□□□□□ -0.61
PDLIM5-210ENST00000508216 TTKP33981 857 aa11.22□□□□□ -0.61
PDLIM5-210ENST00000508216 AP1S2P56377 157 aa11.22□□□□□ -0.61
PDLIM5-210ENST00000508216 RAC1P63000 192 aa11.22□□□□□ -0.61
PDLIM5-210ENST00000508216 PTH1RQ03431 593 aa11.22□□□□□ -0.61
PDLIM5-210ENST00000508216 TAP1Q03518 808 aa11.22□□□□□ -0.61
PDLIM5-210ENST00000508216 GFPT1Q06210 699 aaPredicted RBP11.22□□□□□ -0.61
PDLIM5-210ENST00000508216 STX3Q13277 289 aa11.22□□□□□ -0.61
PDLIM5-210ENST00000508216 PDE1CQ14123 709 aaPredicted RBP11.22□□□□□ -0.61
PDLIM5-210ENST00000508216 SNX17Q15036 470 aa11.22□□□□□ -0.61
PDLIM5-210ENST00000508216 PIK3AP1Q6ZUJ8 805 aa11.22□□□□□ -0.61
PDLIM5-210ENST00000508216 LPCAT2Q7L5N7 544 aa11.22□□□□□ -0.61
PDLIM5-210ENST00000508216 GSTA5Q7RTV2 222 aa11.22□□□□□ -0.61
PDLIM5-210ENST00000508216 UNC45BQ8IWX7 931 aa11.22□□□□□ -0.61
PDLIM5-210ENST00000508216 TCAIMQ8N3R3 496 aa11.22□□□□□ -0.61
PDLIM5-210ENST00000508216 TEX47Q8TBZ9 253 aa11.22□□□□□ -0.61
PDLIM5-210ENST00000508216 CAPSLQ8WWF8 208 aa11.22□□□□□ -0.61
PDLIM5-210ENST00000508216 SLC9A6Q92581 669 aa11.22□□□□□ -0.61
PDLIM5-210ENST00000508216 ZNF578Q96N58 590 aaPredicted RBP11.22□□□□□ -0.61
PDLIM5-210ENST00000508216 RMDN3Q96TC7 470 aa11.22□□□□□ -0.61
PDLIM5-210ENST00000508216 C17orf62Q9BQA9 187 aa11.22□□□□□ -0.61
PDLIM5-210ENST00000508216 CLSTN3Q9BQT9 956 aa11.22□□□□□ -0.61
PDLIM5-210ENST00000508216 RAVER2Q9HCJ3 691 aaKnown RBP11.22□□□□□ -0.61
PDLIM5-210ENST00000508216 CYP26B1Q9NR63 512 aa11.22□□□□□ -0.61
PDLIM5-210ENST00000508216 POLE3Q9NRF9 147 aa11.22□□□□□ -0.61
PDLIM5-210ENST00000508216 SNTG2Q9NY99 539 aa11.22□□□□□ -0.61
PDLIM5-210ENST00000508216 DPP7Q9UHL4 492 aa11.22□□□□□ -0.61
PDLIM5-210ENST00000508216 PRR12Q9ULL5 1215 aa11.22□□□□□ -0.61
PDLIM5-210ENST00000508216 ACTL7BQ9Y614 415 aa11.22□□□□□ -0.61
PDLIM5-210ENST00000508216 FRMPD4Q14CM0 1322 aa11.22□□□□□ -0.61
PDLIM5-210ENST00000508216 ZCCHC11Q5TAX3 1644 aaKnown RBP11.22□□□□□ -0.61
PDLIM5-210ENST00000508216 A0A1W2PQJ5 194 aa11.21□□□□□ -0.61
PDLIM5-210ENST00000508216 ZNF839A8K0R7 811 aa11.21□□□□□ -0.61
PDLIM5-210ENST00000508216 GATCO43716 136 aaKnown RBP11.21□□□□□ -0.61
PDLIM5-210ENST00000508216 SPAG7O75391 227 aa11.21□□□□□ -0.61
PDLIM5-210ENST00000508216 APBB3O95704 486 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms