RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 TMEM161BQ8NDZ6 487 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 TTC8Q8TAM2 541 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 TCP10LQ8TDR4 215 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 CPA5Q8WXQ8 436 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 LZICQ8WZA0 190 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 PTPRN2Q92932 1015 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 KCNN1Q92952 543 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 ATP6V0A1Q93050 837 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 PPP2R3CQ969Q6 453 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 SKA1Q96BD8 255 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 MTBPQ96DY7 904 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 OXNAD1Q96HP4 312 aaPredicted RBP5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 C7orf26Q96N11 449 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 FAM210AQ96ND0 272 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 PAFAH2Q99487 392 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 C11orf70Q9BRQ4 267 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 TMEM120AQ9BXJ8 343 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 MAK16Q9BXY0 300 aaKnown RBP5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 PPP1R12CQ9BZL4 782 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 BCAS3Q9H6U6 928 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 SUDS3Q9H7L9 328 aaPredicted RBP5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 AGO4Q9HCK5 861 aaKnown RBP5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 SLCO1B3Q9NPD5 702 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 KCNH7Q9NS40 1196 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 MKS1Q9NXB0 559 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 WRAP73Q9P2S5 460 aaPredicted RBP5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 NXF1Q9UBU9 619 aaKnown RBP5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 CHORDC1Q9UHD1 332 aaPredicted RBP5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 TAGLN3Q9UI15 199 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 ZNF180Q9UJW8 692 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 DNPEPQ9ULA0 475 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 ZMYND8Q9ULU4 1186 aaPredicted RBP5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 AGTPBP1Q9UPW5 1226 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 CNTN6Q9UQ52 1028 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 USTQ9Y2C2 406 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 PCDHB4Q9Y5E5 795 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 UBIAD1Q9Y5Z9 338 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 SNCAIPQ9Y6H5 919 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 RBBP6Q7Z6E9 1792 aaKnown RBP5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 MYH11P35749 1972 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 LTBP1Q14766 1721 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 SMIM31A0A1B0GVY4 71 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 TISP43B9A030 160 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 ERVH48-1M5A8F1 160 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 DDX39AO00148 427 aaKnown RBP5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 FCHO1O14526 889 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 COPEO14579 308 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 TRDMT1O14717 391 aaKnown RBP5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 MCF2LO15068 1137 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 BIRC5O15392 142 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 DHX15O43143 795 aaKnown RBP5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 MED7O43513 233 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 CREB3O43889 395 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 STAM2O75886 525 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 KRT38O76015 456 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 KLHL2O95198 593 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 GDF11O95390 407 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 IFNB1P01574 187 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 HLA-DRAP01903 254 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 WEE2P0C1S8 567 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 MYL4P12829 197 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 GYS1P13807 737 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 DESP17661 470 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 TNNI1P19237 187 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 MMP8P22894 467 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 GLRA2P23416 452 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 ADRA1DP25100 572 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 SERPINB3P29508 390 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 CDC25CP30307 473 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 STIP1P31948 543 aaKnown RBP5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 CDKN2BP42772 138 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 NPTX2P47972 431 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 SERPINB4P48594 390 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 LIG4P49917 911 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 NEK3P51956 506 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 POLE2P56282 527 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 KCNQ4P56696 695 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 TAS2R40P59535 323 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 SLC18A2Q05940 514 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 ASPHQ12797 758 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 GRM1Q13255 1194 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 MTMR1Q13613 665 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 THOC5Q13769 683 aaKnown RBP5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 ACAP1Q15027 740 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 PRKD1Q15139 912 aaPredicted RBP5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 SURF1Q15526 300 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 OASLQ15646 514 aaKnown RBP5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 MAPK6Q16659 721 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 ZACNQ401N2 412 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 LRRC23Q53EV4 343 aaPredicted RBP5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 ACSBG2Q5FVE4 666 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 SLC27A3Q5K4L6 730 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 THEMIS2Q5TEJ8 643 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 TMCO4Q5TGY1 634 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 RASIP1Q5U651 963 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 KAZNQ674X7 775 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 OR52E8Q6IFG1 317 aa5.18□□□□□ -1.58
HMGB3P16-201ENST00000508037 C3orf62Q6ZUJ4 267 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms