RNA–Protein interactions for RNA: ENST00000506963.1

SFXN1-205, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-205ENST00000506963 MTMR3Q13615 1198 aa10.28□□□□□ -0.76
SFXN1-205ENST00000506963 SDHAF4Q5VUM1 108 aa10.28□□□□□ -0.76
SFXN1-205ENST00000506963 SNX30Q5VWJ9 437 aa10.28□□□□□ -0.76
SFXN1-205ENST00000506963 PIGZQ86VD9 579 aa10.28□□□□□ -0.76
SFXN1-205ENST00000506963 NPAS3Q8IXF0 933 aa10.28□□□□□ -0.76
SFXN1-205ENST00000506963 PLCD3Q8N3E9 789 aa10.28□□□□□ -0.76
SFXN1-205ENST00000506963 ITFG1Q8TB96 612 aa10.28□□□□□ -0.76
SFXN1-205ENST00000506963 SHKBP1Q8TBC3 707 aa10.28□□□□□ -0.76
SFXN1-205ENST00000506963 GPR152Q8TDT2 470 aa10.28□□□□□ -0.76
SFXN1-205ENST00000506963 FGF13Q92913 245 aa10.28□□□□□ -0.76
SFXN1-205ENST00000506963 PCMTD1Q96MG8 357 aaPredicted RBP10.28□□□□□ -0.76
SFXN1-205ENST00000506963 SPAG5Q96R06 1193 aa10.28□□□□□ -0.76
SFXN1-205ENST00000506963 XPO4Q9C0E2 1151 aaKnown RBP10.28□□□□□ -0.76
SFXN1-205ENST00000506963 LHX5Q9H2C1 402 aa10.28□□□□□ -0.76
SFXN1-205ENST00000506963 FBXO44Q9H4M3 255 aa10.28□□□□□ -0.76
SFXN1-205ENST00000506963 NLRC4Q9NPP4 1024 aa10.28□□□□□ -0.76
SFXN1-205ENST00000506963 CYLDQ9NQC7 956 aa10.28□□□□□ -0.76
SFXN1-205ENST00000506963 NR2E1Q9Y466 385 aa10.28□□□□□ -0.76
SFXN1-205ENST00000506963 TCF20Q9UGU0 1960 aaKnown RBP10.28□□□□□ -0.76
SFXN1-205ENST00000506963 EYSQ5T1H1 3165 aa10.28□□□□□ -0.76
SFXN1-205ENST00000506963 SPTBN5Q9NRC6 3674 aaKnown RBP10.27□□□□□ -0.76
SFXN1-205ENST00000506963 A0A1W2PQJ5 194 aa10.27□□□□□ -0.77
SFXN1-205ENST00000506963 NRG2O14511 850 aaPredicted RBP10.27□□□□□ -0.77
SFXN1-205ENST00000506963 THAP12O43422 761 aa10.27□□□□□ -0.77
SFXN1-205ENST00000506963 TADA3O75528 432 aa10.27□□□□□ -0.77
SFXN1-205ENST00000506963 MYL4P12829 197 aa10.27□□□□□ -0.77
SFXN1-205ENST00000506963 CYP11B1P15538 503 aa10.27□□□□□ -0.77
SFXN1-205ENST00000506963 DDX6P26196 483 aaKnown RBP eCLIP10.27□□□□□ -0.77
SFXN1-205ENST00000506963 YWHAQP27348 245 aa10.27□□□□□ -0.77
SFXN1-205ENST00000506963 GABRR2P28476 465 aa10.27□□□□□ -0.77
SFXN1-205ENST00000506963 CDH5P33151 784 aaPredicted RBP10.27□□□□□ -0.77
SFXN1-205ENST00000506963 USP8P40818 1118 aa10.27□□□□□ -0.77
SFXN1-205ENST00000506963 TAF12Q16514 161 aa10.27□□□□□ -0.77
SFXN1-205ENST00000506963 PM20D1Q6GTS8 502 aa10.27□□□□□ -0.77
SFXN1-205ENST00000506963 SLC47A2Q86VL8 602 aa10.27□□□□□ -0.77
SFXN1-205ENST00000506963 ZNF677Q86XU0 584 aa10.27□□□□□ -0.77
SFXN1-205ENST00000506963 ZNF276Q8N554 614 aa10.27□□□□□ -0.77
SFXN1-205ENST00000506963 TDRD5Q8NAT2 981 aaKnown RBP10.27□□□□□ -0.77
SFXN1-205ENST00000506963 PDZD8Q8NEN9 1154 aa10.27□□□□□ -0.77
SFXN1-205ENST00000506963 EPS8L1Q8TE68 723 aa10.27□□□□□ -0.77
SFXN1-205ENST00000506963 DDX1Q92499 740 aaKnown RBP10.27□□□□□ -0.77
SFXN1-205ENST00000506963 NXPE3Q969Y0 559 aa10.27□□□□□ -0.77
SFXN1-205ENST00000506963 ACSF2Q96CM8 615 aaPredicted RBP10.27□□□□□ -0.77
SFXN1-205ENST00000506963 TCEAL4Q96EI5 215 aa10.27□□□□□ -0.77
SFXN1-205ENST00000506963 HSFY1Q96LI6 401 aa10.27□□□□□ -0.77
SFXN1-205ENST00000506963 SLITRK1Q96PX8 696 aa10.27□□□□□ -0.77
SFXN1-205ENST00000506963 MYADMQ96S97 322 aa10.27□□□□□ -0.77
SFXN1-205ENST00000506963 SLC4A5Q9BY07 1137 aa10.27□□□□□ -0.77
SFXN1-205ENST00000506963 TRPV4Q9HBA0 871 aa10.27□□□□□ -0.77
SFXN1-205ENST00000506963 ACP6Q9NPH0 428 aa10.27□□□□□ -0.77
SFXN1-205ENST00000506963 AIPL1Q9NZN9 384 aa10.27□□□□□ -0.77
SFXN1-205ENST00000506963 NOCTQ9UK39 431 aaKnown RBP10.27□□□□□ -0.77
SFXN1-205ENST00000506963 SCML2Q9UQR0 700 aa10.27□□□□□ -0.77
SFXN1-205ENST00000506963 NUP210Q8TEM1 1887 aaPredicted RBP10.27□□□□□ -0.77
SFXN1-205ENST00000506963 MYO10Q9HD67 2058 aa10.26□□□□□ -0.77
SFXN1-205ENST00000506963 A0A1W2PRU2 124 aa10.26□□□□□ -0.77
SFXN1-205ENST00000506963 ZNF840PA6NDX5 716 aa10.26□□□□□ -0.77
SFXN1-205ENST00000506963 C2CD4DB7Z1M9 353 aa10.26□□□□□ -0.77
SFXN1-205ENST00000506963 ANHXE9PGG2 379 aa10.26□□□□□ -0.77
SFXN1-205ENST00000506963 M0QYV0 167 aa10.26□□□□□ -0.77
SFXN1-205ENST00000506963 LSM8O95777 96 aaKnown RBP10.26□□□□□ -0.77
SFXN1-205ENST00000506963 OLFM2O95897 454 aa10.26□□□□□ -0.77
SFXN1-205ENST00000506963 CCDC172P0C7W6 258 aa10.26□□□□□ -0.77
SFXN1-205ENST00000506963 PNMA6AP0CW24 399 aaPredicted RBP10.26□□□□□ -0.77
SFXN1-205ENST00000506963 FERP16591 822 aa10.26□□□□□ -0.77
SFXN1-205ENST00000506963 CEBPBP17676 345 aa10.26□□□□□ -0.77
SFXN1-205ENST00000506963 TUBP50607 506 aa10.26□□□□□ -0.77
SFXN1-205ENST00000506963 PDE6CP51160 858 aa10.26□□□□□ -0.77
SFXN1-205ENST00000506963 TAF10Q12962 218 aa10.26□□□□□ -0.77
SFXN1-205ENST00000506963 ARID5BQ14865 1188 aa10.26□□□□□ -0.77
SFXN1-205ENST00000506963 SPECC1LQ69YQ0 1117 aa10.26□□□□□ -0.77
SFXN1-205ENST00000506963 POTEHQ6S545 545 aa10.26□□□□□ -0.77
SFXN1-205ENST00000506963 GET4Q7L5D6 327 aaPredicted RBP10.26□□□□□ -0.77
SFXN1-205ENST00000506963 GPRIN1Q7Z2K8 1008 aa10.26□□□□□ -0.77
SFXN1-205ENST00000506963 CCDC186Q7Z3E2 898 aa10.26□□□□□ -0.77
SFXN1-205ENST00000506963 CACNA2D4Q7Z3S7 1137 aa10.26□□□□□ -0.77
SFXN1-205ENST00000506963 MON1AQ86VX9 555 aa10.26□□□□□ -0.77
SFXN1-205ENST00000506963 VSTM4Q8IW00 320 aa10.26□□□□□ -0.77
SFXN1-205ENST00000506963 STKLD1Q8NE28 680 aa10.26□□□□□ -0.77
SFXN1-205ENST00000506963 SCAMP5Q8TAC9 235 aa10.26□□□□□ -0.77
SFXN1-205ENST00000506963 UBA3Q8TBC4 463 aa10.26□□□□□ -0.77
SFXN1-205ENST00000506963 SYN2Q92777 582 aaPredicted RBP10.26□□□□□ -0.77
SFXN1-205ENST00000506963 SECISBP2LQ93073 1101 aaKnown RBP10.26□□□□□ -0.77
SFXN1-205ENST00000506963 GCNAQ96QF7 691 aa10.26□□□□□ -0.77
SFXN1-205ENST00000506963 NUCKS1Q9H1E3 243 aaKnown RBP10.26□□□□□ -0.77
SFXN1-205ENST00000506963 ATXN3LQ9H3M9 355 aa10.26□□□□□ -0.77
SFXN1-205ENST00000506963 TASP1Q9H6P5 420 aa10.26□□□□□ -0.77
SFXN1-205ENST00000506963 CAPN11Q9UMQ6 739 aa10.26□□□□□ -0.77
SFXN1-205ENST00000506963 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.26□□□□□ -0.777e-7■■□□□ 11.9
SFXN1-205ENST00000506963 BDP1A6H8Y1 2624 aa10.26□□□□□ -0.77
SFXN1-205ENST00000506963 TULP2O00295 520 aa10.25□□□□□ -0.77
SFXN1-205ENST00000506963 AP5Z1O43299 807 aa10.25□□□□□ -0.77
SFXN1-205ENST00000506963 GABBR2O75899 941 aa10.25□□□□□ -0.77
SFXN1-205ENST00000506963 GFPT2O94808 682 aa10.25□□□□□ -0.77
SFXN1-205ENST00000506963 CALCAP01258 141 aa10.25□□□□□ -0.77
SFXN1-205ENST00000506963 GBP2P32456 591 aaPredicted RBP10.25□□□□□ -0.77
SFXN1-205ENST00000506963 KRT9P35527 623 aa10.25□□□□□ -0.77
SFXN1-205ENST00000506963 PRKCIP41743 596 aa10.25□□□□□ -0.77
SFXN1-205ENST00000506963 ACADSBP45954 432 aa10.25□□□□□ -0.77
SFXN1-205ENST00000506963 PSEN1P49768 467 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms