RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 LGALS16A8MUM7 142 aa6.98□□□□□ -1.29
HERC4-213ENST00000506515 PIP5K1BO14986 540 aa6.98□□□□□ -1.29
HERC4-213ENST00000506515 KCNQ3O43525 872 aa6.98□□□□□ -1.29
HERC4-213ENST00000506515 COQ9O75208 318 aa6.98□□□□□ -1.29
HERC4-213ENST00000506515 CSTBP04080 98 aaKnown RBP6.98□□□□□ -1.29
HERC4-213ENST00000506515 ITGAMP11215 1152 aa6.98□□□□□ -1.29
HERC4-213ENST00000506515 HGFP14210 728 aa6.98□□□□□ -1.29
HERC4-213ENST00000506515 PRKAR1BP31321 381 aa6.98□□□□□ -1.29
HERC4-213ENST00000506515 GALNT1Q10472 559 aaPredicted RBP6.98□□□□□ -1.29
HERC4-213ENST00000506515 SF3B3Q15393 1217 aaKnown RBP6.98□□□□□ -1.29
HERC4-213ENST00000506515 ZACNQ401N2 412 aa6.98□□□□□ -1.29
HERC4-213ENST00000506515 SPATS1Q496A3 300 aa6.98□□□□□ -1.29
HERC4-213ENST00000506515 FAXCQ5TGI0 409 aa6.98□□□□□ -1.29
HERC4-213ENST00000506515 MANEALQ5VSG8 457 aa6.98□□□□□ -1.29
HERC4-213ENST00000506515 CCDC28AQ8IWP9 274 aa6.98□□□□□ -1.29
HERC4-213ENST00000506515 FAM109AQ8N4B1 249 aa6.98□□□□□ -1.29
HERC4-213ENST00000506515 SSH3Q8TE77 659 aa6.98□□□□□ -1.29
HERC4-213ENST00000506515 SH3RF3Q8TEJ3 882 aaPredicted RBP6.98□□□□□ -1.29
HERC4-213ENST00000506515 CACTINQ8WUQ7 758 aaKnown RBP6.98□□□□□ -1.29
HERC4-213ENST00000506515 LPIN2Q92539 896 aa6.98□□□□□ -1.29
HERC4-213ENST00000506515 HAS1Q92839 578 aa6.98□□□□□ -1.29
HERC4-213ENST00000506515 ZBTB45Q96K62 511 aaPredicted RBP6.98□□□□□ -1.29
HERC4-213ENST00000506515 TRIM5Q9C035 493 aa6.98□□□□□ -1.29
HERC4-213ENST00000506515 NECTIN3Q9NQS3 549 aa6.98□□□□□ -1.29
HERC4-213ENST00000506515 TBCCD1Q9NVR7 557 aa6.98□□□□□ -1.29
HERC4-213ENST00000506515 IGSF9Q9P2J2 1179 aa6.98□□□□□ -1.29
HERC4-213ENST00000506515 REXO2Q9Y3B8 237 aaKnown RBP6.98□□□□□ -1.29
HERC4-213ENST00000506515 ERICH3Q5RHP9 1530 aa6.97□□□□□ -1.29
HERC4-213ENST00000506515 CREB3O43889 395 aa6.97□□□□□ -1.29
HERC4-213ENST00000506515 PECAM1P16284 738 aaPredicted RBP6.97□□□□□ -1.29
HERC4-213ENST00000506515 EGR1P18146 543 aa6.97□□□□□ -1.29
HERC4-213ENST00000506515 PTGS2P35354 604 aa6.97□□□□□ -1.29
HERC4-213ENST00000506515 PDE6CP51160 858 aa6.97□□□□□ -1.29
HERC4-213ENST00000506515 EIF2B5Q13144 721 aaKnown RBP6.97□□□□□ -1.29
HERC4-213ENST00000506515 CCNIQ14094 377 aa6.97□□□□□ -1.29
HERC4-213ENST00000506515 SPARCL1Q14515 664 aa6.97□□□□□ -1.29
HERC4-213ENST00000506515 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.97□□□□□ -1.29
HERC4-213ENST00000506515 CERCAMQ5T4B2 595 aa6.97□□□□□ -1.29
HERC4-213ENST00000506515 ERCC6L2Q5T890 1561 aa6.97□□□□□ -1.29
HERC4-213ENST00000506515 USP17L6PQ6QN14 398 aa6.97□□□□□ -1.29
HERC4-213ENST00000506515 TOR1AIP2Q8NFQ8 470 aa6.97□□□□□ -1.29
HERC4-213ENST00000506515 ATRIPQ8WXE1 791 aa6.97□□□□□ -1.29
HERC4-213ENST00000506515 ASB10Q8WXI3 467 aa6.97□□□□□ -1.29
HERC4-213ENST00000506515 ATG4AQ8WYN0 398 aa6.97□□□□□ -1.29
HERC4-213ENST00000506515 LTV1Q96GA3 475 aaPredicted RBP6.97□□□□□ -1.29
HERC4-213ENST00000506515 SLC25A32Q9H2D1 315 aa6.97□□□□□ -1.29
HERC4-213ENST00000506515 SNX14Q9Y5W7 946 aa6.97□□□□□ -1.29
HERC4-213ENST00000506515 SHROOM2Q13796 1616 aa6.97□□□□□ -1.29
HERC4-213ENST00000506515 NPC1O15118 1278 aa6.96□□□□□ -1.3
HERC4-213ENST00000506515 CD3EAPO15446 510 aaKnown RBP6.96□□□□□ -1.3
HERC4-213ENST00000506515 TYRP1P17643 537 aa6.96□□□□□ -1.3
HERC4-213ENST00000506515 YY1P25490 414 aa6.96□□□□□ -1.3
HERC4-213ENST00000506515 SCAPQ12770 1279 aa6.96□□□□□ -1.3
HERC4-213ENST00000506515 TUBA3CQ13748 450 aa6.96□□□□□ -1.3
HERC4-213ENST00000506515 MAPKAPK3Q16644 382 aa6.96□□□□□ -1.3
HERC4-213ENST00000506515 LY6KQ17RY6 165 aa6.96□□□□□ -1.3
HERC4-213ENST00000506515 TMTC4Q5T4D3 741 aa6.96□□□□□ -1.3
HERC4-213ENST00000506515 MZT2AQ6P582 158 aa6.96□□□□□ -1.3
HERC4-213ENST00000506515 TUBA3EQ6PEY2 450 aa6.96□□□□□ -1.3
HERC4-213ENST00000506515 KCNV1Q6PIU1 500 aa6.96□□□□□ -1.3
HERC4-213ENST00000506515 ARHGEF19Q8IW93 802 aa6.96□□□□□ -1.3
HERC4-213ENST00000506515 ABRAQ8N0Z2 381 aa6.96□□□□□ -1.3
HERC4-213ENST00000506515 NKAPQ8N5F7 415 aaKnown RBP6.96□□□□□ -1.3
HERC4-213ENST00000506515 MYCBPAPQ8TBZ2 947 aa6.96□□□□□ -1.3
HERC4-213ENST00000506515 ZNF384Q8TF68 577 aa6.96□□□□□ -1.3
HERC4-213ENST00000506515 STYXQ8WUJ0 223 aa6.96□□□□□ -1.3
HERC4-213ENST00000506515 OSCP1Q8WVF1 389 aa6.96□□□□□ -1.3
HERC4-213ENST00000506515 RMDN3Q96TC7 470 aa6.96□□□□□ -1.3
HERC4-213ENST00000506515 ZBTB26Q9HCK0 441 aa6.96□□□□□ -1.3
HERC4-213ENST00000506515 CASS4Q9NQ75 786 aa6.96□□□□□ -1.3
HERC4-213ENST00000506515 DACT1Q9NYF0 836 aa6.96□□□□□ -1.3
HERC4-213ENST00000506515 PTPRGP23470 1445 aa6.95□□□□□ -1.3
HERC4-213ENST00000506515 ABCA5Q8WWZ7 1642 aa6.95□□□□□ -1.3
HERC4-213ENST00000506515 TRIM38O00635 465 aa6.95□□□□□ -1.3
HERC4-213ENST00000506515 PPFIA4O75335 1185 aa6.95□□□□□ -1.3
HERC4-213ENST00000506515 PEX11BO96011 259 aa6.95□□□□□ -1.3
HERC4-213ENST00000506515 ERBB2P04626 1255 aa6.95□□□□□ -1.3
HERC4-213ENST00000506515 RHOP08100 348 aa6.95□□□□□ -1.3
HERC4-213ENST00000506515 NTSR1P30989 418 aa6.95□□□□□ -1.3
HERC4-213ENST00000506515 UQCRC1P31930 480 aa6.95□□□□□ -1.3
HERC4-213ENST00000506515 GRK6P43250 576 aa6.95□□□□□ -1.3
HERC4-213ENST00000506515 PGDP52209 483 aa6.95□□□□□ -1.3
HERC4-213ENST00000506515 FOXE3Q13461 319 aa6.95□□□□□ -1.3
HERC4-213ENST00000506515 MRNIPQ6NTE8 343 aa6.95□□□□□ -1.3
HERC4-213ENST00000506515 TLDC1Q6P9B6 456 aa6.95□□□□□ -1.3
HERC4-213ENST00000506515 SPRED1Q7Z699 444 aa6.95□□□□□ -1.3
HERC4-213ENST00000506515 PRRT2Q7Z6L0 340 aaPredicted RBP6.95□□□□□ -1.3
HERC4-213ENST00000506515 MYRIPQ8NFW9 859 aa6.95□□□□□ -1.3
HERC4-213ENST00000506515 PROKR1Q8TCW9 393 aa6.95□□□□□ -1.3
HERC4-213ENST00000506515 FUBP1Q96AE4 644 aaKnown RBP6.95□□□□□ -1.3
HERC4-213ENST00000506515 FAM227BQ96M60 508 aa6.95□□□□□ -1.3
HERC4-213ENST00000506515 KRTAP4-7Q9BYR0 210 aa6.95□□□□□ -1.3
HERC4-213ENST00000506515 TMOD4Q9NZQ9 345 aa6.95□□□□□ -1.3
HERC4-213ENST00000506515 DNAJB11Q9UBS4 358 aa6.95□□□□□ -1.3
HERC4-213ENST00000506515 PLB1Q6P1J6 1458 aa6.95□□□□□ -1.3
HERC4-213ENST00000506515 TEX14Q8IWB6 1497 aa6.94□□□□□ -1.3
HERC4-213ENST00000506515 CCNT2O60583 730 aaKnown RBP6.94□□□□□ -1.3
HERC4-213ENST00000506515 TNFRSF6BO95407 300 aa6.94□□□□□ -1.3
HERC4-213ENST00000506515 LMNAP02545 664 aaKnown RBP6.94□□□□□ -1.3
HERC4-213ENST00000506515 SRGNP10124 158 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms