RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 ZNF263O14978 683 aa17.64■□□□□ 0.41
SNCA-209ENST00000506244 PRAMEF12O95522 483 aa17.64■□□□□ 0.41
SNCA-209ENST00000506244 VDRP11473 427 aa17.64■□□□□ 0.41
SNCA-209ENST00000506244 VIPR2P41587 438 aa17.64■□□□□ 0.41
SNCA-209ENST00000506244 GPC5P78333 572 aa17.64■□□□□ 0.41
SNCA-209ENST00000506244 PLCB2Q00722 1185 aa17.64■□□□□ 0.41
SNCA-209ENST00000506244 FCHO2Q0JRZ9 810 aa17.64■□□□□ 0.41
SNCA-209ENST00000506244 TAF10Q12962 218 aa17.64■□□□□ 0.41
SNCA-209ENST00000506244 GRM2Q14416 872 aa17.64■□□□□ 0.41
SNCA-209ENST00000506244 HSP90AA4PQ58FG1 418 aa17.64■□□□□ 0.41
SNCA-209ENST00000506244 CDKAL1Q5VV42 579 aa17.64■□□□□ 0.41
SNCA-209ENST00000506244 HFE2Q6ZVN8 426 aa17.64■□□□□ 0.41
SNCA-209ENST00000506244 RRAGAQ7L523 313 aa17.64■□□□□ 0.41
SNCA-209ENST00000506244 ARHGEF19Q8IW93 802 aa17.64■□□□□ 0.41
SNCA-209ENST00000506244 SIX5Q8N196 739 aa17.64■□□□□ 0.41
SNCA-209ENST00000506244 FBXL6Q8N531 539 aa17.64■□□□□ 0.41
SNCA-209ENST00000506244 RBBP8NLQ8NC74 664 aaPredicted RBP17.64■□□□□ 0.41
SNCA-209ENST00000506244 ZMIZ2Q8NF64 920 aa17.64■□□□□ 0.41
SNCA-209ENST00000506244 BPIFB1Q8TDL5 484 aa17.64■□□□□ 0.41
SNCA-209ENST00000506244 CRACR2AQ9BSW2 395 aa17.64■□□□□ 0.41
SNCA-209ENST00000506244 TDP1Q9NUW8 608 aa17.64■□□□□ 0.41
SNCA-209ENST00000506244 THG1LQ9NWX6 298 aaKnown RBP17.64■□□□□ 0.41
SNCA-209ENST00000506244 ZNF638Q14966 1978 aaKnown RBP17.63■□□□□ 0.41
SNCA-209ENST00000506244 FAM92AA1XBS5 289 aa17.63■□□□□ 0.41
SNCA-209ENST00000506244 ZNF840PA6NDX5 716 aa17.63■□□□□ 0.41
SNCA-209ENST00000506244 CHADO15335 359 aa17.63■□□□□ 0.41
SNCA-209ENST00000506244 ACO1P21399 889 aaKnown RBP17.63■□□□□ 0.41
SNCA-209ENST00000506244 TUBP50607 506 aa17.63■□□□□ 0.41
SNCA-209ENST00000506244 GOLGA7BQ2TAP0 167 aa17.63■□□□□ 0.41
SNCA-209ENST00000506244 SKOR2Q2VWA4 1001 aaPredicted RBP17.63■□□□□ 0.41
SNCA-209ENST00000506244 ARHGAP29Q52LW3 1261 aa17.63■□□□□ 0.41
SNCA-209ENST00000506244 MIIPQ5JXC2 388 aa17.63■□□□□ 0.41
SNCA-209ENST00000506244 PHLDB3Q6NSJ2 640 aa17.63■□□□□ 0.41
SNCA-209ENST00000506244 ANKRD52Q8NB46 1076 aa17.63■□□□□ 0.41
SNCA-209ENST00000506244 PLA2G2FQ9BZM2 168 aa17.63■□□□□ 0.41
SNCA-209ENST00000506244 UBE2TQ9NPD8 197 aaPredicted RBP17.63■□□□□ 0.41
SNCA-209ENST00000506244 TRPV5Q9NQA5 729 aa17.63■□□□□ 0.41
SNCA-209ENST00000506244 IL37Q9NZH6 218 aa17.63■□□□□ 0.41
SNCA-209ENST00000506244 TSPAN16Q9UKR8 245 aa17.63■□□□□ 0.41
SNCA-209ENST00000506244 CA14Q9ULX7 337 aa17.63■□□□□ 0.41
SNCA-209ENST00000506244 BEST1O76090 585 aa17.62■□□□□ 0.41
SNCA-209ENST00000506244 ABL1P00519 1130 aa17.62■□□□□ 0.41
SNCA-209ENST00000506244 SETSIPP0DME0 302 aa17.62■□□□□ 0.41
SNCA-209ENST00000506244 KRT5P13647 590 aa17.62■□□□□ 0.41
SNCA-209ENST00000506244 PON1P27169 355 aa17.62■□□□□ 0.41
SNCA-209ENST00000506244 GDI1P31150 447 aa17.62■□□□□ 0.41
SNCA-209ENST00000506244 PRKCQQ04759 706 aa17.62■□□□□ 0.41
SNCA-209ENST00000506244 BST2Q10589 180 aaKnown RBP17.62■□□□□ 0.41
SNCA-209ENST00000506244 MLF2Q15773 248 aaPredicted RBP17.62■□□□□ 0.41
SNCA-209ENST00000506244 KAT5Q92993 513 aa17.62■□□□□ 0.41
SNCA-209ENST00000506244 BPIFA3Q9BQP9 254 aa17.62■□□□□ 0.41
SNCA-209ENST00000506244 UBXN6Q9BZV1 441 aa17.62■□□□□ 0.41
SNCA-209ENST00000506244 TLR8Q9NR97 1041 aaKnown RBP17.62■□□□□ 0.41
SNCA-209ENST00000506244 SCML2Q9UQR0 700 aa17.62■□□□□ 0.41
SNCA-209ENST00000506244 MYO16Q9Y6X6 1858 aa17.62■□□□□ 0.41
SNCA-209ENST00000506244 ANAPC1Q9H1A4 1944 aa17.61■□□□□ 0.41
SNCA-209ENST00000506244 C2orf78A6NCI8 922 aa17.61■□□□□ 0.41
SNCA-209ENST00000506244 O00370 1275 aa17.61■□□□□ 0.41
SNCA-209ENST00000506244 HDCP19113 662 aa17.61■□□□□ 0.41
SNCA-209ENST00000506244 SLC9A1P19634 815 aa17.61■□□□□ 0.41
SNCA-209ENST00000506244 ZNF132P52740 706 aa17.61■□□□□ 0.41
SNCA-209ENST00000506244 ANO6Q4KMQ2 910 aa17.61■□□□□ 0.41
SNCA-209ENST00000506244 FKBP15Q5T1M5 1219 aa17.61■□□□□ 0.41
SNCA-209ENST00000506244 SNX30Q5VWJ9 437 aa17.61■□□□□ 0.41
SNCA-209ENST00000506244 CC2D1AQ6P1N0 951 aaPredicted RBP17.61■□□□□ 0.41
SNCA-209ENST00000506244 DDX42Q86XP3 938 aaKnown RBP eCLIP17.61■□□□□ 0.41
SNCA-209ENST00000506244 SCAMP5Q8TAC9 235 aa17.61■□□□□ 0.41
SNCA-209ENST00000506244 CSGALNACT1Q8TDX6 532 aa17.61■□□□□ 0.41
SNCA-209ENST00000506244 USP13Q92995 863 aaPredicted RBP17.61■□□□□ 0.41
SNCA-209ENST00000506244 MSANTD3Q96H12 275 aa17.61■□□□□ 0.41
SNCA-209ENST00000506244 KREMEN1Q96MU8 473 aa17.61■□□□□ 0.41
SNCA-209ENST00000506244 FANCLQ9NW38 375 aa17.61■□□□□ 0.41
SNCA-209ENST00000506244 ARHGAP26Q9UNA1 814 aa17.61■□□□□ 0.41
SNCA-209ENST00000506244 CNTN6Q9UQ52 1028 aa17.61■□□□□ 0.41
SNCA-209ENST00000506244 HCN4Q9Y3Q4 1203 aa17.61■□□□□ 0.41
SNCA-209ENST00000506244 HELZP42694 1942 aaKnown RBP17.6■□□□□ 0.41
SNCA-209ENST00000506244 HHLA1C9JL84 531 aa17.6■□□□□ 0.41
SNCA-209ENST00000506244 XPO1O14980 1071 aaKnown RBP17.6■□□□□ 0.41
SNCA-209ENST00000506244 OLFM2O95897 454 aa17.6■□□□□ 0.41
SNCA-209ENST00000506244 OAS1P00973 400 aaKnown RBP17.6■□□□□ 0.41
SNCA-209ENST00000506244 TCF3P15923 654 aa17.6■□□□□ 0.41
SNCA-209ENST00000506244 PSEN1P49768 467 aa17.6■□□□□ 0.41
SNCA-209ENST00000506244 USP4Q13107 963 aa17.6■□□□□ 0.41
SNCA-209ENST00000506244 KRT31Q15323 416 aa17.6■□□□□ 0.41
SNCA-209ENST00000506244 SLC44A4Q53GD3 710 aa17.6■□□□□ 0.41
SNCA-209ENST00000506244 HECTD3Q5T447 861 aa17.6■□□□□ 0.41
SNCA-209ENST00000506244 C1orf228Q6PIY5 440 aa17.6■□□□□ 0.41
SNCA-209ENST00000506244 LCLAT1Q6UWP7 414 aa17.6■□□□□ 0.41
SNCA-209ENST00000506244 AOPEPQ8N6M6 819 aa17.6■□□□□ 0.41
SNCA-209ENST00000506244 ARL14EPQ8N8R7 260 aaPredicted RBP17.6■□□□□ 0.41
SNCA-209ENST00000506244 FLCNQ8NFG4 579 aa17.6■□□□□ 0.41
SNCA-209ENST00000506244 RSPRY1Q96DX4 576 aa17.6■□□□□ 0.41
SNCA-209ENST00000506244 SMG9Q9H0W8 520 aaKnown RBP17.6■□□□□ 0.41
SNCA-209ENST00000506244 TBC1D17Q9HA65 648 aa17.6■□□□□ 0.41
SNCA-209ENST00000506244 TAB2Q9NYJ8 693 aa17.6■□□□□ 0.41
SNCA-209ENST00000506244 GMIPQ9P107 970 aa17.6■□□□□ 0.41
SNCA-209ENST00000506244 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.6■□□□□ 0.41
SNCA-209ENST00000506244 KIF26AQ9ULI4 1882 aaPredicted RBP17.6■□□□□ 0.41
SNCA-209ENST00000506244 KRBA1A5PL33 1030 aa17.59■□□□□ 0.41
SNCA-209ENST00000506244 SMTNL1A8MU46 457 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms