RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 NFKBIZQ9BYH8 718 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 TRIM6Q9C030 488 aaPredicted RBP3.66□□□□□ -1.82
TCOF1-208ENST00000506063 PDZD7Q9H5P4 517 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 C6orf106Q9H6K1 298 aaPredicted RBP3.66□□□□□ -1.82
TCOF1-208ENST00000506063 PTPRHQ9HD43 1115 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 RIC8AQ9NPQ8 531 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 ARHGEF4Q9NR80 690 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 HELLSQ9NRZ9 838 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 HSFX1Q9UBD0 423 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.66□□□□□ -1.82
TCOF1-208ENST00000506063 SAMM50Q9Y512 469 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 ENTPD2Q9Y5L3 495 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 U3KQA8 63 aa3.66□□□□□ -1.82
TCOF1-208ENST00000506063 MAP1AP78559 2803 aaPredicted RBP3.66□□□□□ -1.82
TCOF1-208ENST00000506063 ZGRF1Q86YA3 2104 aa3.65□□□□□ -1.82
TCOF1-208ENST00000506063 NYNRINQ9P2P1 1898 aaKnown RBP3.65□□□□□ -1.82
TCOF1-208ENST00000506063 SMIM28A0A1B0GU29 152 aa3.65□□□□□ -1.83
TCOF1-208ENST00000506063 A0A1B0GVM2 712 aa3.65□□□□□ -1.83
TCOF1-208ENST00000506063 KIAA1324LA8MWY0 1029 aaPredicted RBP3.65□□□□□ -1.83
TCOF1-208ENST00000506063 WASH3PC4AMC7 463 aa3.65□□□□□ -1.83
TCOF1-208ENST00000506063 INO80B-WBP1J3KQ70 363 aa3.65□□□□□ -1.83
TCOF1-208ENST00000506063 K7EM74 188 aa3.65□□□□□ -1.83
TCOF1-208ENST00000506063 M0QZQ0 153 aa3.65□□□□□ -1.83
TCOF1-208ENST00000506063 LAD1O00515 517 aa3.65□□□□□ -1.83
TCOF1-208ENST00000506063 PODXLO00592 558 aa3.65□□□□□ -1.83
TCOF1-208ENST00000506063 TRIM38O00635 465 aa3.65□□□□□ -1.83
TCOF1-208ENST00000506063 VILLO15195 856 aa3.65□□□□□ -1.83
TCOF1-208ENST00000506063 CASC3O15234 703 aaKnown RBP3.65□□□□□ -1.83
TCOF1-208ENST00000506063 MSH4O15457 936 aa3.65□□□□□ -1.83
TCOF1-208ENST00000506063 HNRNPRO43390 633 aaKnown RBP3.65□□□□□ -1.83
TCOF1-208ENST00000506063 DFNA5O60443 496 aa3.65□□□□□ -1.83
TCOF1-208ENST00000506063 TSPAN3O60637 253 aa3.65□□□□□ -1.83
TCOF1-208ENST00000506063 PSMD10O75832 226 aa3.65□□□□□ -1.83
TCOF1-208ENST00000506063 GJB6O95452 261 aa3.65□□□□□ -1.83
TCOF1-208ENST00000506063 FOSP01100 380 aaPredicted RBP3.65□□□□□ -1.83
TCOF1-208ENST00000506063 ITGAVP06756 1048 aa3.65□□□□□ -1.83
TCOF1-208ENST00000506063 GIMD1P0DJR0 217 aa3.65□□□□□ -1.83
TCOF1-208ENST00000506063 CIITAP33076 1130 aa3.65□□□□□ -1.83
TCOF1-208ENST00000506063 AARSP49588 968 aaKnown RBP eCLIP3.65□□□□□ -1.83
TCOF1-208ENST00000506063 RPL10AP62906 217 aaKnown RBP3.65□□□□□ -1.83
TCOF1-208ENST00000506063 SETQ01105 290 aaPredicted RBP3.65□□□□□ -1.83
TCOF1-208ENST00000506063 NR1H3Q13133 447 aa3.65□□□□□ -1.83
TCOF1-208ENST00000506063 EMC2Q15006 297 aa3.65□□□□□ -1.83
TCOF1-208ENST00000506063 ZXDCQ2QGD7 858 aaPredicted RBP3.65□□□□□ -1.83
TCOF1-208ENST00000506063 FUT11Q495W5 492 aa3.65□□□□□ -1.83
TCOF1-208ENST00000506063 MCMDC2Q4G0Z9 681 aa3.65□□□□□ -1.83
TCOF1-208ENST00000506063 EEF1DP3Q658K8 133 aa3.65□□□□□ -1.83
TCOF1-208ENST00000506063 WWC2Q6AWC2 1192 aa3.65□□□□□ -1.83
TCOF1-208ENST00000506063 PPP4R3CPQ6ZMV5 832 aa3.65□□□□□ -1.83
TCOF1-208ENST00000506063 ITIH5Q86UX2 942 aa3.65□□□□□ -1.83
TCOF1-208ENST00000506063 VASH2Q86V25 355 aa3.65□□□□□ -1.83
TCOF1-208ENST00000506063 PRIMA1Q86XR5 153 aa3.65□□□□□ -1.83
TCOF1-208ENST00000506063 NOSTRINQ8IVI9 506 aa3.65□□□□□ -1.83
TCOF1-208ENST00000506063 MCEMP1Q8IX19 187 aa3.65□□□□□ -1.83
TCOF1-208ENST00000506063 FAM9BQ8IZU0 186 aa3.65□□□□□ -1.83
TCOF1-208ENST00000506063 TERB1Q8NA31 727 aa3.65□□□□□ -1.83
TCOF1-208ENST00000506063 OR10T2Q8NGX3 314 aa3.65□□□□□ -1.83
TCOF1-208ENST00000506063 PDCD6IPQ8WUM4 868 aaKnown RBP3.65□□□□□ -1.83
TCOF1-208ENST00000506063 SLC5A5Q92911 643 aa3.65□□□□□ -1.83
TCOF1-208ENST00000506063 BIRC7Q96CA5 298 aa3.65□□□□□ -1.83
TCOF1-208ENST00000506063 ATXN7L3BQ96GX2 97 aa3.65□□□□□ -1.83
TCOF1-208ENST00000506063 DEPDC7Q96QD5 511 aa3.65□□□□□ -1.83
TCOF1-208ENST00000506063 UBAC1Q9BSL1 405 aa3.65□□□□□ -1.83
TCOF1-208ENST00000506063 PCED1AQ9H1Q7 454 aa3.65□□□□□ -1.83
TCOF1-208ENST00000506063 TMEM206Q9H813 350 aa3.65□□□□□ -1.83
TCOF1-208ENST00000506063 EBF2Q9HAK2 575 aa3.65□□□□□ -1.83
TCOF1-208ENST00000506063 ZNF71Q9NQZ8 489 aaPredicted RBP3.65□□□□□ -1.83
TCOF1-208ENST00000506063 BMP2KQ9NSY1 1161 aaPredicted RBP3.65□□□□□ -1.83
TCOF1-208ENST00000506063 ITGB1BP2Q9UKP3 347 aa3.65□□□□□ -1.83
TCOF1-208ENST00000506063 PCDHB8Q9UN66 801 aa3.65□□□□□ -1.83
TCOF1-208ENST00000506063 ARHGAP26Q9UNA1 814 aa3.65□□□□□ -1.83
TCOF1-208ENST00000506063 ENTPD4Q9Y227 616 aa3.65□□□□□ -1.83
TCOF1-208ENST00000506063 USP20Q9Y2K6 914 aa3.65□□□□□ -1.83
TCOF1-208ENST00000506063 TIMM13Q9Y5L4 95 aaPredicted RBP3.65□□□□□ -1.83
TCOF1-208ENST00000506063 ABCA4P78363 2273 aa3.65□□□□□ -1.83
TCOF1-208ENST00000506063 PKD1L1Q8TDX9 2849 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 VPS13CQ709C8 3753 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 A0A1W2PR77 199 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 ARHGAP10A1A4S6 786 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 C2orf78A6NCI8 922 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 MYMKA6NI61 221 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 PRRT4C9JH25 899 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 EML1O00423 815 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 SCAMP3O14828 347 aaKnown RBP3.64□□□□□ -1.83
TCOF1-208ENST00000506063 WNT9AO14904 365 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 ASAP2O43150 1006 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 CYP26A1O43174 497 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 CHMP2AO43633 222 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 SIGLEC6O43699 453 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 TULP3O75386 442 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 IGHV4-34P06331 123 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 ITGA2BP08514 1039 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 ATP2B1P20020 1258 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 GLRA2P23416 452 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 CD27P26842 260 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 RBMS1P29558 406 aaKnown RBP3.64□□□□□ -1.83
TCOF1-208ENST00000506063 SFNP31947 248 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 ACSL1P33121 698 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 ARL2P36404 184 aa3.64□□□□□ -1.83
TCOF1-208ENST00000506063 MLLT3P42568 568 aaPredicted RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms