RNA–Protein interactions for RNA: ENST00000504677.5

POLR2J3-210, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-210ENST00000504677 MMGT1Q8N4V1 131 aa12.54□□□□□ -0.4
POLR2J3-210ENST00000504677 GPR161Q8N6U8 529 aaKnown RBP12.54□□□□□ -0.4
POLR2J3-210ENST00000504677 EXD1Q8NHP7 514 aa12.54□□□□□ -0.4
POLR2J3-210ENST00000504677 C2orf15Q8WU43 125 aaKnown RBP12.54□□□□□ -0.4
POLR2J3-210ENST00000504677 RUBCNQ92622 972 aa12.54□□□□□ -0.4
POLR2J3-210ENST00000504677 ALG3Q92685 438 aa12.54□□□□□ -0.4
POLR2J3-210ENST00000504677 RBM41Q96IZ5 413 aaKnown RBP12.54□□□□□ -0.4
POLR2J3-210ENST00000504677 ZNF558Q96NG5 402 aa12.54□□□□□ -0.4
POLR2J3-210ENST00000504677 SMOQ99835 787 aa12.54□□□□□ -0.4
POLR2J3-210ENST00000504677 TTPALQ9BTX7 342 aa12.54□□□□□ -0.4
POLR2J3-210ENST00000504677 CWH43Q9H720 699 aa12.54□□□□□ -0.4
POLR2J3-210ENST00000504677 USTQ9Y2C2 406 aa12.54□□□□□ -0.4
POLR2J3-210ENST00000504677 DAB1O75553 588 aa12.53□□□□□ -0.4
POLR2J3-210ENST00000504677 FGBP02675 491 aa12.53□□□□□ -0.4
POLR2J3-210ENST00000504677 PDGFRAP16234 1089 aa12.53□□□□□ -0.4
POLR2J3-210ENST00000504677 PPM1AP35813 382 aa12.53□□□□□ -0.4
POLR2J3-210ENST00000504677 SSR1P43307 286 aaKnown RBP12.53□□□□□ -0.4
POLR2J3-210ENST00000504677 MAGEA11P43364 429 aa12.53□□□□□ -0.4
POLR2J3-210ENST00000504677 MARCKSL1P49006 195 aa12.53□□□□□ -0.4
POLR2J3-210ENST00000504677 COPS2P61201 443 aa12.53□□□□□ -0.4
POLR2J3-210ENST00000504677 DEFB103AP81534 67 aa12.53□□□□□ -0.4
POLR2J3-210ENST00000504677 MRPS5P82675 430 aaKnown RBP12.53□□□□□ -0.4
POLR2J3-210ENST00000504677 BTG3Q14201 252 aaPredicted RBP12.53□□□□□ -0.4
POLR2J3-210ENST00000504677 CCDC142Q17RM4 750 aa12.53□□□□□ -0.4
POLR2J3-210ENST00000504677 USP41Q3LFD5 358 aa12.53□□□□□ -0.4
POLR2J3-210ENST00000504677 GLE1Q53GS7 698 aaKnown RBP12.53□□□□□ -0.4
POLR2J3-210ENST00000504677 ODF2Q5BJF6 829 aa12.53□□□□□ -0.4
POLR2J3-210ENST00000504677 SPOUT1Q5T280 376 aaKnown RBP12.53□□□□□ -0.4
POLR2J3-210ENST00000504677 SCUBE3Q8IX30 993 aa12.53□□□□□ -0.4
POLR2J3-210ENST00000504677 EMC1Q8N766 993 aa12.53□□□□□ -0.4
POLR2J3-210ENST00000504677 LRRN4CLQ8ND94 238 aa12.53□□□□□ -0.4
POLR2J3-210ENST00000504677 RXFP2Q8WXD0 754 aa12.53□□□□□ -0.4
POLR2J3-210ENST00000504677 IRGQQ8WZA9 623 aa12.53□□□□□ -0.4
POLR2J3-210ENST00000504677 IGSF21Q96ID5 467 aa12.53□□□□□ -0.4
POLR2J3-210ENST00000504677 MS4A14Q96JA4 679 aa12.53□□□□□ -0.4
POLR2J3-210ENST00000504677 HTATIP2Q9BUP3 242 aa12.53□□□□□ -0.4
POLR2J3-210ENST00000504677 GPR62Q9BZJ7 368 aa12.53□□□□□ -0.4
POLR2J3-210ENST00000504677 AAASQ9NRG9 546 aa12.53□□□□□ -0.4
POLR2J3-210ENST00000504677 PCDHB5Q9Y5E4 795 aa12.53□□□□□ -0.4
POLR2J3-210ENST00000504677 F8VP50 259 aa12.52□□□□□ -0.41
POLR2J3-210ENST00000504677 PIK3R2O00459 728 aa12.52□□□□□ -0.41
POLR2J3-210ENST00000504677 KRIT1O00522 736 aa12.52□□□□□ -0.41
POLR2J3-210ENST00000504677 TRIM66O15016 1216 aa12.52□□□□□ -0.41
POLR2J3-210ENST00000504677 LRCH4O75427 683 aa12.52□□□□□ -0.41
POLR2J3-210ENST00000504677 GABBR2O75899 941 aa12.52□□□□□ -0.41
POLR2J3-210ENST00000504677 ZRANB2O95218 330 aaKnown RBP eCLIP12.52□□□□□ -0.41
POLR2J3-210ENST00000504677 EFEMP2O95967 443 aa12.52□□□□□ -0.41
POLR2J3-210ENST00000504677 FGGP02679 453 aa12.52□□□□□ -0.41
POLR2J3-210ENST00000504677 ACRP10323 421 aa12.52□□□□□ -0.41
POLR2J3-210ENST00000504677 BDNFP23560 247 aa12.52□□□□□ -0.41
POLR2J3-210ENST00000504677 MCM3P25205 808 aa12.52□□□□□ -0.41
POLR2J3-210ENST00000504677 FLT3P36888 993 aa12.52□□□□□ -0.41
POLR2J3-210ENST00000504677 TKTL1P51854 596 aa12.52□□□□□ -0.41
POLR2J3-210ENST00000504677 TAS2R40P59535 323 aa12.52□□□□□ -0.41
POLR2J3-210ENST00000504677 SLC25A11Q02978 314 aaKnown RBP12.52□□□□□ -0.41
POLR2J3-210ENST00000504677 ADCY1Q08828 1119 aa12.52□□□□□ -0.41
POLR2J3-210ENST00000504677 ELF2Q15723 593 aa12.52□□□□□ -0.41
POLR2J3-210ENST00000504677 LONRF2Q1L5Z9 754 aa12.52□□□□□ -0.41
POLR2J3-210ENST00000504677 ERCC6LQ2NKX8 1250 aa12.52□□□□□ -0.41
POLR2J3-210ENST00000504677 SLC39A12Q504Y0 691 aa12.52□□□□□ -0.41
POLR2J3-210ENST00000504677 KCNT2Q6UVM3 1135 aa12.52□□□□□ -0.41
POLR2J3-210ENST00000504677 LRRTM3Q86VH5 581 aa12.52□□□□□ -0.41
POLR2J3-210ENST00000504677 CEP57Q86XR8 500 aa12.52□□□□□ -0.41
POLR2J3-210ENST00000504677 GPR65Q8IYL9 337 aa12.52□□□□□ -0.41
POLR2J3-210ENST00000504677 RNF168Q8IYW5 571 aaPredicted RBP12.52□□□□□ -0.41
POLR2J3-210ENST00000504677 RCOR2Q8IZ40 523 aa12.52□□□□□ -0.41
POLR2J3-210ENST00000504677 SPPL2BQ8TCT7 592 aa12.52□□□□□ -0.41
POLR2J3-210ENST00000504677 TMEM169Q96HH4 297 aa12.52□□□□□ -0.41
POLR2J3-210ENST00000504677 RUNDC3BQ96NL0 473 aa12.52□□□□□ -0.41
POLR2J3-210ENST00000504677 YME1L1Q96TA2 773 aa12.52□□□□□ -0.41
POLR2J3-210ENST00000504677 TBCBQ99426 244 aa12.52□□□□□ -0.41
POLR2J3-210ENST00000504677 HERC2P3Q9BVR0 1158 aa12.52□□□□□ -0.41
POLR2J3-210ENST00000504677 MTIF3Q9H2K0 278 aaKnown RBP12.52□□□□□ -0.41
POLR2J3-210ENST00000504677 RRN3Q9NYV6 651 aa12.52□□□□□ -0.41
POLR2J3-210ENST00000504677 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.52□□□□□ -0.41
POLR2J3-210ENST00000504677 HCSTQ9UBK5 93 aa12.52□□□□□ -0.41
POLR2J3-210ENST00000504677 MTUS1Q9ULD2 1270 aa12.52□□□□□ -0.41
POLR2J3-210ENST00000504677 STAP1Q9ULZ2 295 aa12.52□□□□□ -0.41
POLR2J3-210ENST00000504677 BACE2Q9Y5Z0 518 aa12.52□□□□□ -0.41
POLR2J3-210ENST00000504677 PTPRSQ13332 1948 aa12.51□□□□□ -0.41
POLR2J3-210ENST00000504677 TARSL2A2RTX5 802 aaKnown RBP12.51□□□□□ -0.41
POLR2J3-210ENST00000504677 ZBBXA8MT70 800 aa12.51□□□□□ -0.41
POLR2J3-210ENST00000504677 HHLA1C9JL84 531 aa12.51□□□□□ -0.41
POLR2J3-210ENST00000504677 PRPSAP2O60256 369 aa12.51□□□□□ -0.41
POLR2J3-210ENST00000504677 TBC1D4O60343 1298 aa12.51□□□□□ -0.41
POLR2J3-210ENST00000504677 BEST1O76090 585 aa12.51□□□□□ -0.41
POLR2J3-210ENST00000504677 KRT1P04264 644 aa12.51□□□□□ -0.41
POLR2J3-210ENST00000504677 PYGMP11217 842 aa12.51□□□□□ -0.41
POLR2J3-210ENST00000504677 CPB1P15086 417 aa12.51□□□□□ -0.41
POLR2J3-210ENST00000504677 NOS2P35228 1153 aa12.51□□□□□ -0.41
POLR2J3-210ENST00000504677 PTPN7P35236 360 aa12.51□□□□□ -0.41
POLR2J3-210ENST00000504677 MATKP42679 507 aa12.51□□□□□ -0.41
POLR2J3-210ENST00000504677 DAOAP59103 153 aa12.51□□□□□ -0.41
POLR2J3-210ENST00000504677 RNASE9P60153 205 aaKnown RBP12.51□□□□□ -0.41
POLR2J3-210ENST00000504677 YWHAZP63104 245 aaKnown RBP12.51□□□□□ -0.41
POLR2J3-210ENST00000504677 C2orf54Q08AI8 447 aa12.51□□□□□ -0.41
POLR2J3-210ENST00000504677 GPR17Q13304 367 aa12.51□□□□□ -0.41
POLR2J3-210ENST00000504677 ZNF211Q13398 564 aaPredicted RBP12.51□□□□□ -0.41
POLR2J3-210ENST00000504677 SMC1AQ14683 1233 aaKnown RBP12.51□□□□□ -0.41
POLR2J3-210ENST00000504677 ZFYVE27Q5T4F4 411 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms