RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 INTS8Q75QN2 995 aaKnown RBP14.88□□□□□ -0.03
PDLIM7-211ENST00000504318 SPEM1Q8N4L4 309 aa14.88□□□□□ -0.03
PDLIM7-211ENST00000504318 OSCP1Q8WVF1 389 aa14.88□□□□□ -0.03
PDLIM7-211ENST00000504318 SEMA4DQ92854 862 aa14.88□□□□□ -0.03
PDLIM7-211ENST00000504318 ERCC4Q92889 916 aaPredicted RBP14.88□□□□□ -0.03
PDLIM7-211ENST00000504318 ZFRQ96KR1 1074 aaKnown RBP14.88□□□□□ -0.03
PDLIM7-211ENST00000504318 EPC1Q9H2F5 836 aa14.88□□□□□ -0.03
PDLIM7-211ENST00000504318 CSNK1G1Q9HCP0 422 aa14.88□□□□□ -0.03
PDLIM7-211ENST00000504318 FRMD4BQ9Y2L6 1034 aa14.88□□□□□ -0.03
PDLIM7-211ENST00000504318 TRAV19A0A0A6YYK7 116 aa14.87□□□□□ -0.03
PDLIM7-211ENST00000504318 HHLA1C9JL84 531 aa14.87□□□□□ -0.03
PDLIM7-211ENST00000504318 KIF20AO95235 890 aa14.87□□□□□ -0.03
PDLIM7-211ENST00000504318 GJA4P35212 333 aa14.87□□□□□ -0.03
PDLIM7-211ENST00000504318 GCLMP48507 274 aa14.87□□□□□ -0.03
PDLIM7-211ENST00000504318 NDST1P52848 882 aa14.87□□□□□ -0.03
PDLIM7-211ENST00000504318 NUCB2P80303 420 aa14.87□□□□□ -0.03
PDLIM7-211ENST00000504318 TAF10Q12962 218 aa14.87□□□□□ -0.03
PDLIM7-211ENST00000504318 ORC1Q13415 861 aa14.87□□□□□ -0.03
PDLIM7-211ENST00000504318 ADAM9Q13443 819 aa14.87□□□□□ -0.03
PDLIM7-211ENST00000504318 DGKKQ5KSL6 1271 aa14.87□□□□□ -0.03
PDLIM7-211ENST00000504318 ACOT1Q86TX2 421 aa14.87□□□□□ -0.03
PDLIM7-211ENST00000504318 UNC93AQ86WB7 457 aa14.87□□□□□ -0.03
PDLIM7-211ENST00000504318 FAM186BQ8IYM0 893 aa14.87□□□□□ -0.03
PDLIM7-211ENST00000504318 SCAMP5Q8TAC9 235 aa14.87□□□□□ -0.03
PDLIM7-211ENST00000504318 SH3RF2Q8TEC5 729 aa14.87□□□□□ -0.03
PDLIM7-211ENST00000504318 LINC00597Q9H2U6 94 aa14.87□□□□□ -0.03
PDLIM7-211ENST00000504318 ECT2Q9H8V3 914 aa14.87□□□□□ -0.03
PDLIM7-211ENST00000504318 TRPC7Q9HCX4 862 aa14.87□□□□□ -0.03
PDLIM7-211ENST00000504318 THG1LQ9NWX6 298 aaKnown RBP14.87□□□□□ -0.03
PDLIM7-211ENST00000504318 PCDHA5Q9Y5H7 936 aa14.87□□□□□ -0.03
PDLIM7-211ENST00000504318 WNT6Q9Y6F9 365 aa14.87□□□□□ -0.03
PDLIM7-211ENST00000504318 CEP250Q9BV73 2442 aa14.86□□□□□ -0.03
PDLIM7-211ENST00000504318 CCDC130P13994 396 aa14.86□□□□□ -0.03
PDLIM7-211ENST00000504318 HDCP19113 662 aa14.86□□□□□ -0.03
PDLIM7-211ENST00000504318 ANXA13P27216 316 aa14.86□□□□□ -0.03
PDLIM7-211ENST00000504318 PSMC2P35998 433 aaKnown RBP14.86□□□□□ -0.03
PDLIM7-211ENST00000504318 PPP3CCP48454 512 aa14.86□□□□□ -0.03
PDLIM7-211ENST00000504318 CCR3P51677 355 aa14.86□□□□□ -0.03
PDLIM7-211ENST00000504318 SLC5A3P53794 718 aa14.86□□□□□ -0.03
PDLIM7-211ENST00000504318 PDGFRLQ15198 375 aa14.86□□□□□ -0.03
PDLIM7-211ENST00000504318 ZNF658Q5TYW1 1059 aaPredicted RBP14.86□□□□□ -0.03
PDLIM7-211ENST00000504318 ELOA2Q8IYF1 753 aaPredicted RBP14.86□□□□□ -0.03
PDLIM7-211ENST00000504318 NUP93Q8N1F7 819 aa14.86□□□□□ -0.03
PDLIM7-211ENST00000504318 SYNPOQ8N3V7 929 aa14.86□□□□□ -0.03
PDLIM7-211ENST00000504318 KIAA1958Q8N8K9 716 aa14.86□□□□□ -0.03
PDLIM7-211ENST00000504318 C12orf29Q8N999 325 aa14.86□□□□□ -0.03
PDLIM7-211ENST00000504318 OVCA2Q8WZ82 227 aa14.86□□□□□ -0.03
PDLIM7-211ENST00000504318 EEF2KMTQ96G04 330 aa14.86□□□□□ -0.03
PDLIM7-211ENST00000504318 TIGD1Q96MW7 591 aa14.86□□□□□ -0.03
PDLIM7-211ENST00000504318 GSDMAQ96QA5 445 aa14.86□□□□□ -0.03
PDLIM7-211ENST00000504318 FAM126AQ9BYI3 521 aaPredicted RBP14.86□□□□□ -0.03
PDLIM7-211ENST00000504318 TMEM8AQ9HCN3 771 aa14.86□□□□□ -0.03
PDLIM7-211ENST00000504318 LEFTY2O00292 366 aa14.85□□□□□ -0.03
PDLIM7-211ENST00000504318 CILPO75339 1184 aa14.85□□□□□ -0.03
PDLIM7-211ENST00000504318 EGFP01133 1207 aa14.85□□□□□ -0.03
PDLIM7-211ENST00000504318 CKMP06732 381 aa14.85□□□□□ -0.03
PDLIM7-211ENST00000504318 BMP6P22004 513 aa14.85□□□□□ -0.03
PDLIM7-211ENST00000504318 TGM1P22735 817 aa14.85□□□□□ -0.03
PDLIM7-211ENST00000504318 HOXA6P31267 233 aa14.85□□□□□ -0.03
PDLIM7-211ENST00000504318 GTF2H1P32780 548 aa14.85□□□□□ -0.03
PDLIM7-211ENST00000504318 PIK3CAP42336 1068 aa14.85□□□□□ -0.03
PDLIM7-211ENST00000504318 LRRC32Q14392 662 aa14.85□□□□□ -0.03
PDLIM7-211ENST00000504318 GPRIN1Q7Z2K8 1008 aa14.85□□□□□ -0.03
PDLIM7-211ENST00000504318 SLC2A14Q8TDB8 520 aa14.85□□□□□ -0.03
PDLIM7-211ENST00000504318 CCDC47Q96A33 483 aaKnown RBP14.85□□□□□ -0.03
PDLIM7-211ENST00000504318 SMARCD1Q96GM5 515 aa14.85□□□□□ -0.03
PDLIM7-211ENST00000504318 TNIP3Q96KP6 325 aa14.85□□□□□ -0.03
PDLIM7-211ENST00000504318 DMAP1Q9NPF5 467 aaPredicted RBP14.85□□□□□ -0.03
PDLIM7-211ENST00000504318 KRT82Q9NSB4 513 aa14.85□□□□□ -0.03
PDLIM7-211ENST00000504318 TRPM5Q9NZQ8 1165 aa14.85□□□□□ -0.03
PDLIM7-211ENST00000504318 TRIM49BA6NDI0 452 aa14.84□□□□□ -0.03
PDLIM7-211ENST00000504318 ANTXRLA6NF34 631 aa14.84□□□□□ -0.03
PDLIM7-211ENST00000504318 GREM1O60565 184 aa14.84□□□□□ -0.03
PDLIM7-211ENST00000504318 KINO60870 393 aaKnown RBP14.84□□□□□ -0.03
PDLIM7-211ENST00000504318 CD44P16070 742 aaKnown RBP14.84□□□□□ -0.03
PDLIM7-211ENST00000504318 RPL13P26373 211 aaKnown RBP14.84□□□□□ -0.03
PDLIM7-211ENST00000504318 YWHAQP27348 245 aa14.84□□□□□ -0.03
PDLIM7-211ENST00000504318 OPRD1P41143 372 aa14.84□□□□□ -0.03
PDLIM7-211ENST00000504318 CXCL12P48061 93 aa14.84□□□□□ -0.03
PDLIM7-211ENST00000504318 GALK1P51570 392 aa14.84□□□□□ -0.03
PDLIM7-211ENST00000504318 CBWD6Q4V339 395 aa14.84□□□□□ -0.03
PDLIM7-211ENST00000504318 CBWD3Q5JTY5 395 aa14.84□□□□□ -0.03
PDLIM7-211ENST00000504318 CBWD5Q5RIA9 395 aa14.84□□□□□ -0.03
PDLIM7-211ENST00000504318 ANKRD40Q6AI12 368 aa14.84□□□□□ -0.03
PDLIM7-211ENST00000504318 CLEC20AQ6ZU45 233 aa14.84□□□□□ -0.03
PDLIM7-211ENST00000504318 DCLK2Q8N568 766 aa14.84□□□□□ -0.03
PDLIM7-211ENST00000504318 WBP2Q969T9 261 aa14.84□□□□□ -0.03
PDLIM7-211ENST00000504318 HNRNPABQ99729 332 aaKnown RBP14.84□□□□□ -0.03
PDLIM7-211ENST00000504318 DUSP9Q99956 384 aaKnown RBP14.84□□□□□ -0.03
PDLIM7-211ENST00000504318 NIF3L1Q9GZT8 377 aa14.84□□□□□ -0.03
PDLIM7-211ENST00000504318 CYP3A43Q9HB55 503 aa14.84□□□□□ -0.03
PDLIM7-211ENST00000504318 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.84□□□□□ -0.038e-7■■■■■ 46.3
PDLIM7-211ENST00000504318 DUS2Q9NX74 493 aaKnown RBP14.84□□□□□ -0.03
PDLIM7-211ENST00000504318 EHD2Q9NZN4 543 aa14.84□□□□□ -0.03
PDLIM7-211ENST00000504318 CIZ1Q9ULV3 898 aaPredicted RBP14.84□□□□□ -0.03
PDLIM7-211ENST00000504318 COQ4Q9Y3A0 265 aa14.84□□□□□ -0.03
PDLIM7-211ENST00000504318 CPQQ9Y646 472 aa14.84□□□□□ -0.03
PDLIM7-211ENST00000504318 CACNA1AO00555 2505 aa14.84□□□□□ -0.03
PDLIM7-211ENST00000504318 SPAG17Q6Q759 2223 aa14.83□□□□□ -0.04
PDLIM7-211ENST00000504318 CHURC1-FNTBB4DL54 471 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms