RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 ABLIM3O94929 683 aa3.95□□□□□ -1.78
USP46-205ENST00000504078 LARGE1O95461 756 aa3.95□□□□□ -1.78
USP46-205ENST00000504078 C1RP00736 705 aa3.95□□□□□ -1.78
USP46-205ENST00000504078 FTH1P19P0C7X4 201 aa3.95□□□□□ -1.78
USP46-205ENST00000504078 CXCL8P10145 99 aa3.95□□□□□ -1.78
USP46-205ENST00000504078 RARAP10276 462 aa3.95□□□□□ -1.78
USP46-205ENST00000504078 PLA2G2AP14555 144 aa3.95□□□□□ -1.78
USP46-205ENST00000504078 ATF6P18850 670 aa3.95□□□□□ -1.78
USP46-205ENST00000504078 ATP2B1P20020 1258 aa3.95□□□□□ -1.78
USP46-205ENST00000504078 CSRP1P21291 193 aaKnown RBP3.95□□□□□ -1.78
USP46-205ENST00000504078 ITPKAP23677 461 aa3.95□□□□□ -1.78
USP46-205ENST00000504078 CYP3A7P24462 503 aa3.95□□□□□ -1.78
USP46-205ENST00000504078 HSPA4P34932 840 aa3.95□□□□□ -1.78
USP46-205ENST00000504078 USP11P51784 963 aa3.95□□□□□ -1.78
USP46-205ENST00000504078 ATXN3P54252 364 aaPredicted RBP3.95□□□□□ -1.78
USP46-205ENST00000504078 EPHA5P54756 1037 aa3.95□□□□□ -1.78
USP46-205ENST00000504078 MESP2Q0VG99 397 aa3.95□□□□□ -1.78
USP46-205ENST00000504078 BFSP1Q12934 665 aa3.95□□□□□ -1.78
USP46-205ENST00000504078 RUNX3Q13761 415 aa3.95□□□□□ -1.78
USP46-205ENST00000504078 KARSQ15046 597 aaKnown RBP3.95□□□□□ -1.78
USP46-205ENST00000504078 MAPK6Q16659 721 aa3.95□□□□□ -1.78
USP46-205ENST00000504078 DCAF4L1Q3SXM0 396 aa3.95□□□□□ -1.78
USP46-205ENST00000504078 MGAT5BQ3V5L5 792 aa3.95□□□□□ -1.78
USP46-205ENST00000504078 ARHGAP15Q53QZ3 475 aa3.95□□□□□ -1.78
USP46-205ENST00000504078 ATF7IP2Q5U623 682 aa3.95□□□□□ -1.78
USP46-205ENST00000504078 LARP1BQ659C4 914 aaKnown RBP3.95□□□□□ -1.78
USP46-205ENST00000504078 BLOC1S2Q6QNY1 142 aa3.95□□□□□ -1.78
USP46-205ENST00000504078 SPOCD1Q6ZMY3 1216 aa3.95□□□□□ -1.78
USP46-205ENST00000504078 CBLL1Q75N03 491 aa3.95□□□□□ -1.78
USP46-205ENST00000504078 OTUD6AQ7L8S5 288 aa3.95□□□□□ -1.78
USP46-205ENST00000504078 KRT25Q7Z3Z0 450 aa3.95□□□□□ -1.78
USP46-205ENST00000504078 CACUL1Q86Y37 369 aa3.95□□□□□ -1.78
USP46-205ENST00000504078 MINDY1Q8N5J2 469 aa3.95□□□□□ -1.78
USP46-205ENST00000504078 MAB21L3Q8N8X9 362 aa3.95□□□□□ -1.78
USP46-205ENST00000504078 TSEN2Q8NCE0 465 aaKnown RBP3.95□□□□□ -1.78
USP46-205ENST00000504078 DAGLBQ8NCG7 672 aa3.95□□□□□ -1.78
USP46-205ENST00000504078 OR10T2Q8NGX3 314 aa3.95□□□□□ -1.78
USP46-205ENST00000504078 HMGB4Q8WW32 186 aa3.95□□□□□ -1.78
USP46-205ENST00000504078 USP13Q92995 863 aaPredicted RBP3.95□□□□□ -1.78
USP46-205ENST00000504078 ZBTB45Q96K62 511 aaPredicted RBP3.95□□□□□ -1.78
USP46-205ENST00000504078 ACAP3Q96P50 834 aa3.95□□□□□ -1.78
USP46-205ENST00000504078 GCNAQ96QF7 691 aa3.95□□□□□ -1.78
USP46-205ENST00000504078 P2RY13Q9BPV8 354 aa3.95□□□□□ -1.78
USP46-205ENST00000504078 TARS2Q9BW92 718 aaKnown RBP3.95□□□□□ -1.78
USP46-205ENST00000504078 NUSAP1Q9BXS6 441 aaKnown RBP3.95□□□□□ -1.78
USP46-205ENST00000504078 CEP41Q9BYV8 373 aa3.95□□□□□ -1.78
USP46-205ENST00000504078 RBSNQ9H1K0 784 aa3.95□□□□□ -1.78
USP46-205ENST00000504078 SLC32A1Q9H598 525 aa3.95□□□□□ -1.78
USP46-205ENST00000504078 CCDC86Q9H6F5 360 aaKnown RBP3.95□□□□□ -1.78
USP46-205ENST00000504078 TRPV4Q9HBA0 871 aa3.95□□□□□ -1.78
USP46-205ENST00000504078 TRPV5Q9NQA5 729 aa3.95□□□□□ -1.78
USP46-205ENST00000504078 ABI2Q9NYB9 513 aaPredicted RBP3.95□□□□□ -1.78
USP46-205ENST00000504078 BCCIPQ9P287 314 aaKnown RBP eCLIP3.95□□□□□ -1.78
USP46-205ENST00000504078 AFF4Q9UHB7 1163 aaKnown RBP3.95□□□□□ -1.78
USP46-205ENST00000504078 MAGED2Q9UNF1 606 aaPredicted RBP3.95□□□□□ -1.78
USP46-205ENST00000504078 BPTFQ12830 3046 aa3.95□□□□□ -1.78
USP46-205ENST00000504078 COL5A1P20908 1838 aaPredicted RBP3.95□□□□□ -1.78
USP46-205ENST00000504078 CELSR3Q9NYQ7 3312 aa3.95□□□□□ -1.78
USP46-205ENST00000504078 PHLPP2Q6ZVD8 1323 aa3.95□□□□□ -1.78
USP46-205ENST00000504078 CEP295Q9C0D2 2601 aa3.94□□□□□ -1.78
USP46-205ENST00000504078 PTPRDP23468 1912 aa3.94□□□□□ -1.78
USP46-205ENST00000504078 HELZP42694 1942 aaKnown RBP3.94□□□□□ -1.78
USP46-205ENST00000504078 DMXL2Q8TDJ6 3036 aa3.94□□□□□ -1.78
USP46-205ENST00000504078 CNOT1A5YKK6 2376 aaKnown RBP3.94□□□□□ -1.78
USP46-205ENST00000504078 CCDC196A0A1B0GTZ2 297 aa3.94□□□□□ -1.78
USP46-205ENST00000504078 TCRBV21S2A2A0A5A6 115 aa3.94□□□□□ -1.78
USP46-205ENST00000504078 ARHGEF35A5YM69 484 aa3.94□□□□□ -1.78
USP46-205ENST00000504078 CCDC169A6NNP5 214 aa3.94□□□□□ -1.78
USP46-205ENST00000504078 BTBD18B2RXH4 712 aa3.94□□□□□ -1.78
USP46-205ENST00000504078 SYN3O14994 580 aa3.94□□□□□ -1.78
USP46-205ENST00000504078 TRAPPC3O43617 180 aa3.94□□□□□ -1.78
USP46-205ENST00000504078 SH3BP5O60239 455 aa3.94□□□□□ -1.78
USP46-205ENST00000504078 AKAP3O75969 853 aa3.94□□□□□ -1.78
USP46-205ENST00000504078 SLITRK3O94933 977 aa3.94□□□□□ -1.78
USP46-205ENST00000504078 KLF8O95600 359 aaPredicted RBP3.94□□□□□ -1.78
USP46-205ENST00000504078 IFNAR1P17181 557 aa3.94□□□□□ -1.78
USP46-205ENST00000504078 RPS6KB1P23443 525 aa3.94□□□□□ -1.78
USP46-205ENST00000504078 HOXA6P31267 233 aa3.94□□□□□ -1.78
USP46-205ENST00000504078 GJA4P35212 333 aa3.94□□□□□ -1.78
USP46-205ENST00000504078 WASP42768 502 aa3.94□□□□□ -1.78
USP46-205ENST00000504078 MATR3P43243 847 aaKnown RBP eCLIP3.94□□□□□ -1.78
USP46-205ENST00000504078 ALDH1A3P47895 512 aa3.94□□□□□ -1.78
USP46-205ENST00000504078 IFNAR2P48551 515 aa3.94□□□□□ -1.78
USP46-205ENST00000504078 GALK1P51570 392 aa3.94□□□□□ -1.78
USP46-205ENST00000504078 YARSP54577 528 aaKnown RBP3.94□□□□□ -1.78
USP46-205ENST00000504078 EPHB3P54753 998 aa3.94□□□□□ -1.78
USP46-205ENST00000504078 YWHAHQ04917 246 aaPredicted RBP3.94□□□□□ -1.78
USP46-205ENST00000504078 SSRP1Q08945 709 aaKnown RBP3.94□□□□□ -1.78
USP46-205ENST00000504078 RAD51AP2Q09MP3 1159 aa3.94□□□□□ -1.78
USP46-205ENST00000504078 MTF1Q14872 753 aa3.94□□□□□ -1.78
USP46-205ENST00000504078 CALCRLQ16602 461 aa3.94□□□□□ -1.78
USP46-205ENST00000504078 KRTAP19-4Q3LI73 84 aa3.94□□□□□ -1.78
USP46-205ENST00000504078 SLC39A12Q504Y0 691 aa3.94□□□□□ -1.78
USP46-205ENST00000504078 ZC2HC1CQ53FD0 456 aaPredicted RBP3.94□□□□□ -1.78
USP46-205ENST00000504078 LYSMD4Q5XG99 296 aa3.94□□□□□ -1.78
USP46-205ENST00000504078 TPGS2Q68CL5 300 aa3.94□□□□□ -1.78
USP46-205ENST00000504078 TXNDC8Q6A555 127 aa3.94□□□□□ -1.78
USP46-205ENST00000504078 DSTYKQ6XUX3 929 aa3.94□□□□□ -1.78
USP46-205ENST00000504078 DNAJB7Q7Z6W7 309 aaPredicted RBP3.94□□□□□ -1.78
USP46-205ENST00000504078 C12orf40Q86WS4 652 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms