RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 HLA-DRAP01903 254 aa17.28■□□□□ 0.36
SCLT1-204ENST00000503215 TGM1P22735 817 aa17.28■□□□□ 0.36
SCLT1-204ENST00000503215 NRLP54845 237 aa17.28■□□□□ 0.36
SCLT1-204ENST00000503215 PPP3CAQ08209 521 aa17.28■□□□□ 0.36
SCLT1-204ENST00000503215 GRSF1Q12849 480 aaKnown RBP eCLIP17.28■□□□□ 0.36
SCLT1-204ENST00000503215 SMYD4Q8IYR2 804 aaPredicted RBP17.28■□□□□ 0.36
SCLT1-204ENST00000503215 FUKQ8N0W3 1084 aa17.28■□□□□ 0.36
SCLT1-204ENST00000503215 EEF2KMTQ96G04 330 aa17.28■□□□□ 0.36
SCLT1-204ENST00000503215 APOBEC3GQ9HC16 384 aaKnown RBP17.28■□□□□ 0.36
SCLT1-204ENST00000503215 PARD6AQ9NPB6 346 aa17.28■□□□□ 0.36
SCLT1-204ENST00000503215 CALUO43852 315 aaPredicted RBP17.28■□□□□ 0.36
SCLT1-204ENST00000503215 BEST1O76090 585 aa17.28■□□□□ 0.36
SCLT1-204ENST00000503215 CCDC130P13994 396 aa17.28■□□□□ 0.36
SCLT1-204ENST00000503215 NR2F2P24468 414 aa17.28■□□□□ 0.36
SCLT1-204ENST00000503215 ASPAP45381 313 aa17.28■□□□□ 0.36
SCLT1-204ENST00000503215 IFNAR2P48551 515 aa17.28■□□□□ 0.36
SCLT1-204ENST00000503215 PGFP49763 221 aa17.28■□□□□ 0.36
SCLT1-204ENST00000503215 VAMP7P51809 220 aa17.28■□□□□ 0.36
SCLT1-204ENST00000503215 PPP2R5DQ14738 602 aa17.28■□□□□ 0.36
SCLT1-204ENST00000503215 SGSM1Q2NKQ1 1148 aa17.28■□□□□ 0.36
SCLT1-204ENST00000503215 FAM35AQ86V20 835 aa17.28■□□□□ 0.36
SCLT1-204ENST00000503215 SYNPOQ8N3V7 929 aa17.28■□□□□ 0.36
SCLT1-204ENST00000503215 ZMIZ2Q8NF64 920 aa17.28■□□□□ 0.36
SCLT1-204ENST00000503215 CEP295NLQ96MC4 621 aa17.28■□□□□ 0.36
SCLT1-204ENST00000503215 TWNKQ96RR1 684 aa17.28■□□□□ 0.36
SCLT1-204ENST00000503215 P2RY13Q9BPV8 354 aa17.28■□□□□ 0.36
SCLT1-204ENST00000503215 MED10Q9BTT4 135 aa17.28■□□□□ 0.36
SCLT1-204ENST00000503215 CHORDC1Q9UHD1 332 aaPredicted RBP17.28■□□□□ 0.36
SCLT1-204ENST00000503215 FRMD4BQ9Y2L6 1034 aa17.28■□□□□ 0.36
SCLT1-204ENST00000503215 TNFRSF10BO14763 440 aa17.27■□□□□ 0.35
SCLT1-204ENST00000503215 RNF40O75150 1001 aa17.27■□□□□ 0.35
SCLT1-204ENST00000503215 OLFM2O95897 454 aa17.27■□□□□ 0.35
SCLT1-204ENST00000503215 ASS1P00966 412 aaKnown RBP17.27■□□□□ 0.35
SCLT1-204ENST00000503215 OAS1P00973 400 aaKnown RBP17.27■□□□□ 0.35
SCLT1-204ENST00000503215 YWHAQP27348 245 aa17.27■□□□□ 0.35
SCLT1-204ENST00000503215 GCLMP48507 274 aa17.27■□□□□ 0.35
SCLT1-204ENST00000503215 NDST1P52848 882 aa17.27■□□□□ 0.35
SCLT1-204ENST00000503215 SLC7A9P82251 487 aa17.27■□□□□ 0.35
SCLT1-204ENST00000503215 GAB4Q2WGN9 574 aa17.27■□□□□ 0.35
SCLT1-204ENST00000503215 PRR23BQ6ZRT6 265 aa17.27■□□□□ 0.35
SCLT1-204ENST00000503215 NUP93Q8N1F7 819 aa17.27■□□□□ 0.35
SCLT1-204ENST00000503215 CPA6Q8N4T0 437 aa17.27■□□□□ 0.35
SCLT1-204ENST00000503215 C12orf29Q8N999 325 aa17.27■□□□□ 0.35
SCLT1-204ENST00000503215 TAS1R2Q8TE23 839 aa17.27■□□□□ 0.35
SCLT1-204ENST00000503215 SMOQ99835 787 aa17.27■□□□□ 0.35
SCLT1-204ENST00000503215 ATP6V1DQ9Y5K8 247 aa17.27■□□□□ 0.35
SCLT1-204ENST00000503215 CPQQ9Y646 472 aa17.27■□□□□ 0.35
SCLT1-204ENST00000503215 IKBKBO14920 756 aa17.26■□□□□ 0.35
SCLT1-204ENST00000503215 TCF3P15923 654 aa17.26■□□□□ 0.35
SCLT1-204ENST00000503215 PIK3CAP42336 1068 aa17.26■□□□□ 0.35
SCLT1-204ENST00000503215 PNOCQ13519 176 aa17.26■□□□□ 0.35
SCLT1-204ENST00000503215 SIM2Q14190 667 aaPredicted RBP17.26■□□□□ 0.35
SCLT1-204ENST00000503215 ZCWPW2Q504Y3 356 aa17.26■□□□□ 0.35
SCLT1-204ENST00000503215 FILIP1Q7Z7B0 1213 aa17.26■□□□□ 0.35
SCLT1-204ENST00000503215 LONP2Q86WA8 852 aa17.26■□□□□ 0.35
SCLT1-204ENST00000503215 GUF1Q8N442 669 aaKnown RBP17.26■□□□□ 0.35
SCLT1-204ENST00000503215 SLC2A14Q8TDB8 520 aa17.26■□□□□ 0.35
SCLT1-204ENST00000503215 ERCC4Q92889 916 aaPredicted RBP17.26■□□□□ 0.35
SCLT1-204ENST00000503215 ATP2A3Q93084 1043 aa17.26■□□□□ 0.35
SCLT1-204ENST00000503215 MMRN2Q9H8L6 949 aa17.26■□□□□ 0.35
SCLT1-204ENST00000503215 KRT82Q9NSB4 513 aa17.26■□□□□ 0.35
SCLT1-204ENST00000503215 FAM49BQ9NUQ9 324 aa17.26■□□□□ 0.35
SCLT1-204ENST00000503215 AP1G2O75843 785 aa17.25■□□□□ 0.35
SCLT1-204ENST00000503215 OPRD1P41143 372 aa17.25■□□□□ 0.35
SCLT1-204ENST00000503215 MESP2Q0VG99 397 aa17.25■□□□□ 0.35
SCLT1-204ENST00000503215 ADAM9Q13443 819 aa17.25■□□□□ 0.35
SCLT1-204ENST00000503215 NFIL3Q16649 462 aa17.25■□□□□ 0.35
SCLT1-204ENST00000503215 SFTPA1Q8IWL2 248 aa17.25■□□□□ 0.35
SCLT1-204ENST00000503215 FAM186BQ8IYM0 893 aa17.25■□□□□ 0.35
SCLT1-204ENST00000503215 CRYBG2Q8N1P7 616 aa17.25■□□□□ 0.35
SCLT1-204ENST00000503215 CD101Q93033 1021 aa17.25■□□□□ 0.35
SCLT1-204ENST00000503215 FBXO32Q969P5 355 aa17.25■□□□□ 0.35
SCLT1-204ENST00000503215 WBP2Q969T9 261 aa17.25■□□□□ 0.35
SCLT1-204ENST00000503215 CCDC47Q96A33 483 aaKnown RBP17.25■□□□□ 0.35
SCLT1-204ENST00000503215 TNIP3Q96KP6 325 aa17.25■□□□□ 0.35
SCLT1-204ENST00000503215 SLITRK1Q96PX8 696 aa17.25■□□□□ 0.35
SCLT1-204ENST00000503215 IL37Q9NZH6 218 aa17.25■□□□□ 0.35
SCLT1-204ENST00000503215 GMIPQ9P107 970 aa17.25■□□□□ 0.35
SCLT1-204ENST00000503215 CFAP97Q9P2B7 532 aa17.25■□□□□ 0.35
SCLT1-204ENST00000503215 MAPK13O15264 365 aa17.24■□□□□ 0.35
SCLT1-204ENST00000503215 COCHO43405 550 aa17.24■□□□□ 0.35
SCLT1-204ENST00000503215 MBL2P11226 248 aaPredicted RBP17.24■□□□□ 0.35
SCLT1-204ENST00000503215 PFKLP17858 780 aa17.24■□□□□ 0.35
SCLT1-204ENST00000503215 DRD1P21728 446 aa17.24■□□□□ 0.35
SCLT1-204ENST00000503215 HOXA6P31267 233 aa17.24■□□□□ 0.35
SCLT1-204ENST00000503215 PPP3CCP48454 512 aa17.24■□□□□ 0.35
SCLT1-204ENST00000503215 SLC5A3P53794 718 aa17.24■□□□□ 0.35
SCLT1-204ENST00000503215 SPEM2Q0P670 501 aa17.24■□□□□ 0.35
SCLT1-204ENST00000503215 RSPO4Q2I0M5 234 aaPredicted RBP17.24■□□□□ 0.35
SCLT1-204ENST00000503215 ADGRG2Q8IZP9 1017 aa17.24■□□□□ 0.35
SCLT1-204ENST00000503215 FMR1NBQ8N0W7 255 aaPredicted RBP17.24■□□□□ 0.35
SCLT1-204ENST00000503215 WHAMMQ8TF30 809 aa17.24■□□□□ 0.35
SCLT1-204ENST00000503215 TAF4BQ92750 862 aa17.24■□□□□ 0.35
SCLT1-204ENST00000503215 SEMA4DQ92854 862 aa17.24■□□□□ 0.35
SCLT1-204ENST00000503215 SMARCD1Q96GM5 515 aa17.24■□□□□ 0.35
SCLT1-204ENST00000503215 ZFRQ96KR1 1074 aaKnown RBP17.24■□□□□ 0.35
SCLT1-204ENST00000503215 CCSER2Q9H7U1 834 aa17.24■□□□□ 0.35
SCLT1-204ENST00000503215 DMAP1Q9NPF5 467 aaPredicted RBP17.24■□□□□ 0.35
SCLT1-204ENST00000503215 EHD2Q9NZN4 543 aa17.24■□□□□ 0.35
SCLT1-204ENST00000503215 DNAH14Q0VDD8 3507 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms