RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 PRDM5Q9NQX1 630 aaPredicted RBP9.53□□□□□ -0.88
NR1I3-216ENST00000502848 ST7Q9NRC1 585 aa9.53□□□□□ -0.88
NR1I3-216ENST00000502848 HOMER3Q9NSC5 361 aa9.53□□□□□ -0.88
NR1I3-216ENST00000502848 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.53□□□□□ -0.88
NR1I3-216ENST00000502848 UQCRHLA0A096LP55 91 aa9.52□□□□□ -0.89
NR1I3-216ENST00000502848 MYBPHLA2RUH7 354 aa9.52□□□□□ -0.89
NR1I3-216ENST00000502848 HHLA1C9JL84 531 aa9.52□□□□□ -0.89
NR1I3-216ENST00000502848 ATP2C2O75185 946 aa9.52□□□□□ -0.89
NR1I3-216ENST00000502848 DAB1O75553 588 aa9.52□□□□□ -0.89
NR1I3-216ENST00000502848 C1RP00736 705 aa9.52□□□□□ -0.89
NR1I3-216ENST00000502848 FGBP02675 491 aa9.52□□□□□ -0.89
NR1I3-216ENST00000502848 SOD2P04179 222 aa9.52□□□□□ -0.89
NR1I3-216ENST00000502848 UQCRHP07919 91 aa9.52□□□□□ -0.89
NR1I3-216ENST00000502848 ACAT1P24752 427 aaKnown RBP9.52□□□□□ -0.89
NR1I3-216ENST00000502848 PSMA2P25787 234 aa9.52□□□□□ -0.89
NR1I3-216ENST00000502848 SDC4P31431 198 aa9.52□□□□□ -0.89
NR1I3-216ENST00000502848 MATKP42679 507 aa9.52□□□□□ -0.89
NR1I3-216ENST00000502848 ZNF135P52742 658 aaPredicted RBP9.52□□□□□ -0.89
NR1I3-216ENST00000502848 MRPS5P82675 430 aaKnown RBP9.52□□□□□ -0.89
NR1I3-216ENST00000502848 ZNF252P-AS1Q0IIN9 211 aa9.52□□□□□ -0.89
NR1I3-216ENST00000502848 GPR17Q13304 367 aa9.52□□□□□ -0.89
NR1I3-216ENST00000502848 CYP4A22Q5TCH4 519 aa9.52□□□□□ -0.89
NR1I3-216ENST00000502848 FAM171A1Q5VUB5 890 aa9.52□□□□□ -0.89
NR1I3-216ENST00000502848 OR6B2Q6IFH4 312 aa9.52□□□□□ -0.89
NR1I3-216ENST00000502848 KCNT2Q6UVM3 1135 aa9.52□□□□□ -0.89
NR1I3-216ENST00000502848 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.52□□□□□ -0.89
NR1I3-216ENST00000502848 SPATA2LQ8IUW3 424 aaPredicted RBP9.52□□□□□ -0.89
NR1I3-216ENST00000502848 RCOR2Q8IZ40 523 aa9.52□□□□□ -0.89
NR1I3-216ENST00000502848 EIF1ADQ8N9N8 165 aaKnown RBP9.52□□□□□ -0.89
NR1I3-216ENST00000502848 SPATA4Q8NEY3 305 aa9.52□□□□□ -0.89
NR1I3-216ENST00000502848 HERVK_113Q902F9 699 aa9.52□□□□□ -0.89
NR1I3-216ENST00000502848 CENPIQ92674 756 aaPredicted RBP9.52□□□□□ -0.89
NR1I3-216ENST00000502848 NT5C3BQ969T7 300 aa9.52□□□□□ -0.89
NR1I3-216ENST00000502848 PGAP3Q96FM1 320 aaPredicted RBP9.52□□□□□ -0.89
NR1I3-216ENST00000502848 IGSF21Q96ID5 467 aa9.52□□□□□ -0.89
NR1I3-216ENST00000502848 SLC2A13Q96QE2 648 aa9.52□□□□□ -0.89
NR1I3-216ENST00000502848 SMOQ99835 787 aa9.52□□□□□ -0.89
NR1I3-216ENST00000502848 C11orf84Q9BUA3 381 aaPredicted RBP9.52□□□□□ -0.89
NR1I3-216ENST00000502848 DDX23Q9BUQ8 820 aaKnown RBP9.52□□□□□ -0.89
NR1I3-216ENST00000502848 HERC2P3Q9BVR0 1158 aa9.52□□□□□ -0.89
NR1I3-216ENST00000502848 FRMD8P1Q9BZ68 369 aaPredicted RBP9.52□□□□□ -0.89
NR1I3-216ENST00000502848 SLITRK6Q9H5Y7 841 aa9.52□□□□□ -0.89
NR1I3-216ENST00000502848 POPDC2Q9HBU9 364 aa9.52□□□□□ -0.89
NR1I3-216ENST00000502848 METTL5Q9NRN9 209 aaKnown RBP9.52□□□□□ -0.89
NR1I3-216ENST00000502848 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.52□□□□□ -0.89
NR1I3-216ENST00000502848 CHST7Q9NS84 486 aa9.52□□□□□ -0.89
NR1I3-216ENST00000502848 MTRRQ9UBK8 725 aa9.52□□□□□ -0.89
NR1I3-216ENST00000502848 CACNG4Q9UBN1 327 aa9.52□□□□□ -0.89
NR1I3-216ENST00000502848 MTUS1Q9ULD2 1270 aa9.52□□□□□ -0.89
NR1I3-216ENST00000502848 STAP1Q9ULZ2 295 aa9.52□□□□□ -0.89
NR1I3-216ENST00000502848 SSX2IPQ9Y2D8 614 aa9.52□□□□□ -0.89
NR1I3-216ENST00000502848 PRG3Q9Y2Y8 225 aaPredicted RBP9.52□□□□□ -0.89
NR1I3-216ENST00000502848 RWDD3Q9Y3V2 267 aa9.52□□□□□ -0.89
NR1I3-216ENST00000502848 PCDHB5Q9Y5E4 795 aa9.52□□□□□ -0.89
NR1I3-216ENST00000502848 USP3Q9Y6I4 520 aa9.52□□□□□ -0.89
NR1I3-216ENST00000502848 SCN5AQ14524 2016 aa9.51□□□□□ -0.89
NR1I3-216ENST00000502848 FNDC1Q4ZHG4 1894 aaPredicted RBP9.51□□□□□ -0.89
NR1I3-216ENST00000502848 CEP350Q5VT06 3117 aa9.51□□□□□ -0.89
NR1I3-216ENST00000502848 GOLGA8SH3BPF8 625 aa9.51□□□□□ -0.89
NR1I3-216ENST00000502848 I3L4J1 428 aa9.51□□□□□ -0.89
NR1I3-216ENST00000502848 FSCN2O14926 492 aa9.51□□□□□ -0.89
NR1I3-216ENST00000502848 MDM4O15151 490 aa9.51□□□□□ -0.89
NR1I3-216ENST00000502848 CEP104O60308 925 aa9.51□□□□□ -0.89
NR1I3-216ENST00000502848 SRGAP2O75044 1071 aa9.51□□□□□ -0.89
NR1I3-216ENST00000502848 LRCH4O75427 683 aa9.51□□□□□ -0.89
NR1I3-216ENST00000502848 ENDOD1O94919 500 aa9.51□□□□□ -0.89
NR1I3-216ENST00000502848 ZRANB2O95218 330 aaKnown RBP eCLIP9.51□□□□□ -0.89
NR1I3-216ENST00000502848 GJB5O95377 273 aa9.51□□□□□ -0.89
NR1I3-216ENST00000502848 ZBED1O96006 694 aa9.51□□□□□ -0.89
NR1I3-216ENST00000502848 PDGFRAP16234 1089 aa9.51□□□□□ -0.89
NR1I3-216ENST00000502848 EN2P19622 333 aaPredicted RBP9.51□□□□□ -0.89
NR1I3-216ENST00000502848 ITGB8P26012 769 aa9.51□□□□□ -0.89
NR1I3-216ENST00000502848 SSTR3P32745 418 aaPredicted RBP9.51□□□□□ -0.89
NR1I3-216ENST00000502848 NOS2P35228 1153 aa9.51□□□□□ -0.89
NR1I3-216ENST00000502848 DAOAP59103 153 aa9.51□□□□□ -0.89
NR1I3-216ENST00000502848 YWHAZP63104 245 aaKnown RBP9.51□□□□□ -0.89
NR1I3-216ENST00000502848 ADCY1Q08828 1119 aa9.51□□□□□ -0.89
NR1I3-216ENST00000502848 SLC25A52Q3SY17 297 aa9.51□□□□□ -0.89
NR1I3-216ENST00000502848 CTXN3Q4LDR2 81 aa9.51□□□□□ -0.89
NR1I3-216ENST00000502848 PAN2Q504Q3 1202 aaKnown RBP9.51□□□□□ -0.89
NR1I3-216ENST00000502848 BOLA3Q53S33 107 aa9.51□□□□□ -0.89
NR1I3-216ENST00000502848 DCAF12L1Q5VU92 463 aa9.51□□□□□ -0.89
NR1I3-216ENST00000502848 TPGS2Q68CL5 300 aa9.51□□□□□ -0.89
NR1I3-216ENST00000502848 CC2D1AQ6P1N0 951 aaPredicted RBP9.51□□□□□ -0.89
NR1I3-216ENST00000502848 BNIPLQ7Z465 357 aa9.51□□□□□ -0.89
NR1I3-216ENST00000502848 DDX53Q86TM3 631 aaKnown RBP9.51□□□□□ -0.89
NR1I3-216ENST00000502848 SLC39A11Q8N1S5 342 aa9.51□□□□□ -0.89
NR1I3-216ENST00000502848 ARHGAP18Q8N392 663 aa9.51□□□□□ -0.89
NR1I3-216ENST00000502848 C12orf50Q8NA57 414 aaPredicted RBP9.51□□□□□ -0.89
NR1I3-216ENST00000502848 ZMIZ2Q8NF64 920 aa9.51□□□□□ -0.89
NR1I3-216ENST00000502848 HASPINQ8TF76 798 aa9.51□□□□□ -0.89
NR1I3-216ENST00000502848 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.51□□□□□ -0.89
NR1I3-216ENST00000502848 KHSRPQ92945 711 aaKnown RBP eCLIP9.51□□□□□ -0.89
NR1I3-216ENST00000502848 CLP1Q92989 425 aaKnown RBP9.51□□□□□ -0.89
NR1I3-216ENST00000502848 TMEM169Q96HH4 297 aa9.51□□□□□ -0.89
NR1I3-216ENST00000502848 SPATA17Q96L03 361 aa9.51□□□□□ -0.89
NR1I3-216ENST00000502848 YME1L1Q96TA2 773 aa9.51□□□□□ -0.89
NR1I3-216ENST00000502848 GPR62Q9BZJ7 368 aa9.51□□□□□ -0.89
NR1I3-216ENST00000502848 TRIM7Q9C029 511 aa9.51□□□□□ -0.89
NR1I3-216ENST00000502848 GOLPH3Q9H4A6 298 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms