RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	ZNF564	Q8TBZ8	553 aa	Predicted RBP	12.81	□□□□□ -0.36
MATR3-231	ENST00000502394	CALR3	Q96L12	384 aa	Known RBP	12.81	□□□□□ -0.36
MATR3-231	ENST00000502394	WDR24	Q96S15	920 aa		12.81	□□□□□ -0.36
MATR3-231	ENST00000502394	CLSTN3	Q9BQT9	956 aa		12.81	□□□□□ -0.36
MATR3-231	ENST00000502394	MED10	Q9BTT4	135 aa		12.81	□□□□□ -0.36
MATR3-231	ENST00000502394	NUP85	Q9BW27	656 aa		12.81	□□□□□ -0.36
MATR3-231	ENST00000502394	MIS12	Q9H081	205 aa		12.81	□□□□□ -0.36
MATR3-231	ENST00000502394	RXFP1	Q9HBX9	757 aa		12.81	□□□□□ -0.36
MATR3-231	ENST00000502394	ABCB6	Q9NP58	842 aa		12.81	□□□□□ -0.36
MATR3-231	ENST00000502394	PNPLA8	Q9NP80	782 aa		12.81	□□□□□ -0.36
MATR3-231	ENST00000502394	STRIP2	Q9ULQ0	834 aa		12.81	□□□□□ -0.36
MATR3-231	ENST00000502394	PCDHA11	Q9Y5I1	949 aa		12.81	□□□□□ -0.36
MATR3-231	ENST00000502394	COL4A4	P53420	1690 aa	Predicted RBP	12.8	□□□□□ -0.36
MATR3-231	ENST00000502394	WDR27	A2RRH5	827 aa		12.8	□□□□□ -0.36
MATR3-231	ENST00000502394		H0YGN5	161 aa		12.8	□□□□□ -0.36
MATR3-231	ENST00000502394	MYOG	P15173	224 aa		12.8	□□□□□ -0.36
MATR3-231	ENST00000502394	BDNF	P23560	247 aa		12.8	□□□□□ -0.36
MATR3-231	ENST00000502394	BMP8B	P34820	402 aa		12.8	□□□□□ -0.36
MATR3-231	ENST00000502394	ACADSB	P45954	432 aa		12.8	□□□□□ -0.36
MATR3-231	ENST00000502394	MAP3K7CL	P57077	242 aa		12.8	□□□□□ -0.36
MATR3-231	ENST00000502394	ROR1	Q01973	937 aa		12.8	□□□□□ -0.36
MATR3-231	ENST00000502394	ADCY1	Q08828	1119 aa		12.8	□□□□□ -0.36
MATR3-231	ENST00000502394	OLFML1	Q6UWY5	402 aa		12.8	□□□□□ -0.36
MATR3-231	ENST00000502394	VSTM1	Q6UX27	236 aa		12.8	□□□□□ -0.36
MATR3-231	ENST00000502394	FAM183BP	Q6ZVS7	135 aa		12.8	□□□□□ -0.36
MATR3-231	ENST00000502394	SPATA2L	Q8IUW3	424 aa	Predicted RBP	12.8	□□□□□ -0.36
MATR3-231	ENST00000502394	SCML4	Q8N228	414 aa		12.8	□□□□□ -0.36
MATR3-231	ENST00000502394	TRIM58	Q8NG06	486 aa		12.8	□□□□□ -0.36
MATR3-231	ENST00000502394	SPPL2B	Q8TCT7	592 aa		12.8	□□□□□ -0.36
MATR3-231	ENST00000502394	IPO4	Q8TEX9	1081 aa	Known RBP	12.8	□□□□□ -0.36
MATR3-231	ENST00000502394	C2orf15	Q8WU43	125 aa	Known RBP	12.8	□□□□□ -0.36
MATR3-231	ENST00000502394	PIWIL1	Q96J94	861 aa	Known RBP	12.8	□□□□□ -0.36
MATR3-231	ENST00000502394	KCNK16	Q96T55	309 aa		12.8	□□□□□ -0.36
MATR3-231	ENST00000502394	C17orf80	Q9BSJ5	609 aa		12.8	□□□□□ -0.36
MATR3-231	ENST00000502394	TRIM7	Q9C029	511 aa		12.8	□□□□□ -0.36
MATR3-231	ENST00000502394	DMAP1	Q9NPF5	467 aa	Predicted RBP	12.8	□□□□□ -0.36
MATR3-231	ENST00000502394	PARVA	Q9NVD7	372 aa		12.8	□□□□□ -0.36
MATR3-231	ENST00000502394	FNIP2	Q9P278	1114 aa		12.8	□□□□□ -0.36
MATR3-231	ENST00000502394	CTTNBP2NL	Q9P2B4	639 aa		12.8	□□□□□ -0.36
MATR3-231	ENST00000502394	YBX2	Q9Y2T7	364 aa	Known RBP	12.8	□□□□□ -0.36
MATR3-231	ENST00000502394	PCDHB5	Q9Y5E4	795 aa		12.8	□□□□□ -0.36
MATR3-231	ENST00000502394	CDY1	Q9Y6F8	540 aa		12.8	□□□□□ -0.36
MATR3-231	ENST00000502394	SCIN	Q9Y6U3	715 aa		12.8	□□□□□ -0.36
MATR3-231	ENST00000502394	PATJ	Q8NI35	1801 aa		12.8	□□□□□ -0.36
MATR3-231	ENST00000502394	CEP290	O15078	2479 aa		12.8	□□□□□ -0.36
MATR3-231	ENST00000502394	PLXNA4	Q9HCM2	1894 aa		12.79	□□□□□ -0.36
MATR3-231	ENST00000502394	TMEM191C	A6NGB0	347 aa		12.79	□□□□□ -0.36
MATR3-231	ENST00000502394	SIGLEC16	A6NMB1	481 aa		12.79	□□□□□ -0.36
MATR3-231	ENST00000502394	TNFRSF10B	O14763	440 aa		12.79	□□□□□ -0.36
MATR3-231	ENST00000502394	BUB1B	O60566	1050 aa	Predicted RBP	12.79	□□□□□ -0.36
MATR3-231	ENST00000502394	ABLIM3	O94929	683 aa		12.79	□□□□□ -0.36
MATR3-231	ENST00000502394	GJB6	O95452	261 aa		12.79	□□□□□ -0.36
MATR3-231	ENST00000502394	UROD	P06132	367 aa		12.79	□□□□□ -0.36
MATR3-231	ENST00000502394	RB1	P06400	928 aa		12.79	□□□□□ -0.36
MATR3-231	ENST00000502394	TNNT1	P13805	278 aa		12.79	□□□□□ -0.36
MATR3-231	ENST00000502394	CYP2F1	P24903	491 aa		12.79	□□□□□ -0.36
MATR3-231	ENST00000502394	CTNNB1	P35222	781 aa		12.79	□□□□□ -0.36
MATR3-231	ENST00000502394	ERVK-21	P61565	698 aa		12.79	□□□□□ -0.36
MATR3-231	ENST00000502394	GNG11	P61952	73 aa		12.79	□□□□□ -0.36
MATR3-231	ENST00000502394	KRT17	Q04695	432 aa		12.79	□□□□□ -0.36
MATR3-231	ENST00000502394	UBE3A	Q05086	875 aa		12.79	□□□□□ -0.36
MATR3-231	ENST00000502394	RAB33A	Q14088	237 aa		12.79	□□□□□ -0.36
MATR3-231	ENST00000502394	IFI16	Q16666	785 aa	Known RBP	12.79	□□□□□ -0.36
MATR3-231	ENST00000502394	PROX2	Q3B8N5	592 aa		12.79	□□□□□ -0.36
MATR3-231	ENST00000502394	ZNF569	Q5MCW4	686 aa		12.79	□□□□□ -0.36
MATR3-231	ENST00000502394	C11orf63	Q6NUN7	778 aa		12.79	□□□□□ -0.36
MATR3-231	ENST00000502394	DNAJC24	Q6P3W2	148 aa		12.79	□□□□□ -0.36
MATR3-231	ENST00000502394	SYT10	Q6XYQ8	523 aa		12.79	□□□□□ -0.36
MATR3-231	ENST00000502394	RNF19B	Q6ZMZ0	732 aa		12.79	□□□□□ -0.36
MATR3-231	ENST00000502394	BHLHA9	Q7RTU4	235 aa		12.79	□□□□□ -0.36
MATR3-231	ENST00000502394	GPRIN1	Q7Z2K8	1008 aa		12.79	□□□□□ -0.36
MATR3-231	ENST00000502394	PHLDB2	Q86SQ0	1253 aa		12.79	□□□□□ -0.36
MATR3-231	ENST00000502394	ZDHHC17	Q8IUH5	632 aa		12.79	□□□□□ -0.36
MATR3-231	ENST00000502394	ATAD1	Q8NBU5	361 aa		12.79	□□□□□ -0.36
MATR3-231	ENST00000502394	FEZF2	Q8TBJ5	459 aa		12.79	□□□□□ -0.36
MATR3-231	ENST00000502394	SPPL3	Q8TCT6	385 aa		12.79	□□□□□ -0.36
MATR3-231	ENST00000502394	C8orf48	Q96LL4	319 aa		12.79	□□□□□ -0.36
MATR3-231	ENST00000502394	SAMD11	Q96NU1	681 aa		12.79	□□□□□ -0.36
MATR3-231	ENST00000502394	UBE2O	Q9C0C9	1292 aa	Known RBP	12.79	□□□□□ -0.36
MATR3-231	ENST00000502394	CRISPLD1	Q9H336	500 aa		12.79	□□□□□ -0.36
MATR3-231	ENST00000502394	PRO3102	Q9H379	93 aa		12.79	□□□□□ -0.36
MATR3-231	ENST00000502394	MRPL47	Q9HD33	250 aa	Known RBP	12.79	□□□□□ -0.36
MATR3-231	ENST00000502394	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	12.79	□□□□□ -0.36
MATR3-231	ENST00000502394	TMEM59L	Q9UK28	342 aa		12.79	□□□□□ -0.36
MATR3-231	ENST00000502394	IRAK3	Q9Y616	596 aa		12.79	□□□□□ -0.36
MATR3-231	ENST00000502394	USP3	Q9Y6I4	520 aa		12.79	□□□□□ -0.36
MATR3-231	ENST00000502394	GBF1	Q92538	1859 aa		12.78	□□□□□ -0.36
MATR3-231	ENST00000502394		F8VP50	259 aa		12.78	□□□□□ -0.36
MATR3-231	ENST00000502394	FSCN2	O14926	492 aa		12.78	□□□□□ -0.36
MATR3-231	ENST00000502394	PALM	O75781	387 aa		12.78	□□□□□ -0.36
MATR3-231	ENST00000502394	CA3	P07451	260 aa		12.78	□□□□□ -0.36
MATR3-231	ENST00000502394	HAPLN1	P10915	354 aa	Predicted RBP	12.78	□□□□□ -0.36
MATR3-231	ENST00000502394	CPB1	P15086	417 aa		12.78	□□□□□ -0.36
MATR3-231	ENST00000502394	RPL17	P18621	184 aa	Known RBP	12.78	□□□□□ -0.36
MATR3-231	ENST00000502394	OR1D2	P34982	312 aa		12.78	□□□□□ -0.36
MATR3-231	ENST00000502394	NOP2	P46087	812 aa	Known RBP	12.78	□□□□□ -0.36
MATR3-231	ENST00000502394	CDR1	P51861	262 aa		12.78	□□□□□ -0.36
MATR3-231	ENST00000502394	SLC8A3	P57103	927 aa		12.78	□□□□□ -0.36
MATR3-231	ENST00000502394	RPL7A	P62424	266 aa	Known RBP	12.78	□□□□□ -0.36
MATR3-231	ENST00000502394	SLC6A3	Q01959	620 aa		12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms